RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 NT5C2P49902 561 aa16.39■□□□□ 0.21
ATG4D-206ENST00000586863 OTOP2Q7RTS6 562 aa16.39■□□□□ 0.21
ATG4D-206ENST00000586863 ADGRF4Q8IZF3 695 aa16.39■□□□□ 0.21
ATG4D-206ENST00000586863 SCFD2Q8WU76 684 aa16.39■□□□□ 0.21
ATG4D-206ENST00000586863 PPP1R13LQ8WUF5 828 aa16.39■□□□□ 0.21
ATG4D-206ENST00000586863 TBC1D5Q92609 795 aa16.39■□□□□ 0.21
ATG4D-206ENST00000586863 SCLYQ96I15 445 aa16.39■□□□□ 0.21
ATG4D-206ENST00000586863 ZSCAN10Q96SZ4 725 aaPredicted RBP16.39■□□□□ 0.21
ATG4D-206ENST00000586863 MTG1Q9BT17 334 aaPredicted RBP16.39■□□□□ 0.21
ATG4D-206ENST00000586863 KAT14Q9H8E8 782 aa16.39■□□□□ 0.21
ATG4D-206ENST00000586863 ZSWIM5Q9P217 1185 aa16.39■□□□□ 0.21
ATG4D-206ENST00000586863 TNKSO95271 1327 aa16.39■□□□□ 0.21
ATG4D-206ENST00000586863 FGBP02675 491 aa16.38■□□□□ 0.21
ATG4D-206ENST00000586863 CYP2C9P11712 490 aa16.38■□□□□ 0.21
ATG4D-206ENST00000586863 IMMTQ16891 758 aaKnown RBP16.38■□□□□ 0.21
ATG4D-206ENST00000586863 QRICH1Q2TAL8 776 aa16.38■□□□□ 0.21
ATG4D-206ENST00000586863 ASPRV1Q53RT3 343 aa16.38■□□□□ 0.21
ATG4D-206ENST00000586863 CCDC178Q5BJE1 867 aa16.38■□□□□ 0.21
ATG4D-206ENST00000586863 RGS22Q8NE09 1264 aa16.38■□□□□ 0.21
ATG4D-206ENST00000586863 SYTL5Q8TDW5 730 aaPredicted RBP16.38■□□□□ 0.21
ATG4D-206ENST00000586863 MPHOSPH6Q99547 160 aaKnown RBP16.38■□□□□ 0.21
ATG4D-206ENST00000586863 COL20A1Q9P218 1284 aa16.38■□□□□ 0.21
ATG4D-206ENST00000586863 ABCB11O95342 1321 aa16.38■□□□□ 0.21
ATG4D-206ENST00000586863 A6NJR5 290 aa16.37■□□□□ 0.21
ATG4D-206ENST00000586863 NKRFO15226 690 aaKnown RBP eCLIP16.37■□□□□ 0.21
ATG4D-206ENST00000586863 TXNP10599 105 aaKnown RBP16.37■□□□□ 0.21
ATG4D-206ENST00000586863 NBPF20Q3BBV1 942 aa16.37■□□□□ 0.21
ATG4D-206ENST00000586863 FAM47CQ5HY64 1035 aa16.37■□□□□ 0.21
ATG4D-206ENST00000586863 MTIF3Q9H2K0 278 aaKnown RBP16.37■□□□□ 0.21
ATG4D-206ENST00000586863 GPHNQ9NQX3 736 aaPredicted RBP16.37■□□□□ 0.21
ATG4D-206ENST00000586863 YBX2Q9Y2T7 364 aaKnown RBP16.37■□□□□ 0.21
ATG4D-206ENST00000586863 RAD50Q92878 1312 aa16.37■□□□□ 0.21
ATG4D-206ENST00000586863 PARP1P09874 1014 aaKnown RBP16.36■□□□□ 0.21
ATG4D-206ENST00000586863 PDE4AP27815 886 aa16.36■□□□□ 0.21
ATG4D-206ENST00000586863 TTLL4Q14679 1199 aa16.36■□□□□ 0.21
ATG4D-206ENST00000586863 RAB30Q15771 203 aa16.36■□□□□ 0.21
ATG4D-206ENST00000586863 BRDTQ58F21 947 aaPredicted RBP16.36■□□□□ 0.21
ATG4D-206ENST00000586863 TAAR1Q96RJ0 339 aa16.36■□□□□ 0.21
ATG4D-206ENST00000586863 NKX2-4Q9H2Z4 354 aa16.36■□□□□ 0.21
ATG4D-206ENST00000586863 PRDM12Q9H4Q4 367 aa16.36■□□□□ 0.21
ATG4D-206ENST00000586863 JMJD4Q9H9V9 463 aa16.36■□□□□ 0.21
ATG4D-206ENST00000586863 CTNNA3Q9UI47 895 aa16.36■□□□□ 0.21
ATG4D-206ENST00000586863 MSRAQ9UJ68 235 aa16.36■□□□□ 0.21
ATG4D-206ENST00000586863 MYH7BA7E2Y1 1941 aa16.36■□□□□ 0.21
ATG4D-206ENST00000586863 PRRC2BQ5JSZ5 2229 aaKnown RBP16.35■□□□□ 0.21
ATG4D-206ENST00000586863 B4DLN1 442 aa16.35■□□□□ 0.21
ATG4D-206ENST00000586863 DHX16O60231 1041 aaKnown RBP16.35■□□□□ 0.21
ATG4D-206ENST00000586863 SUPT20HL2P0C7V6 817 aa16.35■□□□□ 0.21
ATG4D-206ENST00000586863 GSPT1P15170 499 aaKnown RBP16.35■□□□□ 0.21
ATG4D-206ENST00000586863 MRPL12P52815 198 aaKnown RBP16.35■□□□□ 0.21
ATG4D-206ENST00000586863 NFRKBQ6P4R8 1299 aa16.35■□□□□ 0.21
ATG4D-206ENST00000586863 CCDC62Q6P9F0 684 aa16.35■□□□□ 0.21
ATG4D-206ENST00000586863 SEPT14Q6ZU15 432 aa16.35■□□□□ 0.21
ATG4D-206ENST00000586863 RPUSD2Q8IZ73 545 aaKnown RBP16.35■□□□□ 0.21
ATG4D-206ENST00000586863 STAG2Q8N3U4 1231 aa16.35■□□□□ 0.21
ATG4D-206ENST00000586863 UBAC1Q9BSL1 405 aa16.35■□□□□ 0.21
ATG4D-206ENST00000586863 KRT23Q9C075 422 aa16.35■□□□□ 0.21
ATG4D-206ENST00000586863 VAT1LQ9HCJ6 419 aa16.35■□□□□ 0.21
ATG4D-206ENST00000586863 XIRP2A4UGR9 3374 aa16.35■□□□□ 0.21
ATG4D-206ENST00000586863 RABGGTBP53611 331 aa16.34■□□□□ 0.21
ATG4D-206ENST00000586863 ADGRE1Q14246 886 aa16.34■□□□□ 0.21
ATG4D-206ENST00000586863 IFIT1BQ5T764 474 aaKnown RBP16.34■□□□□ 0.21
ATG4D-206ENST00000586863 CYB5R4Q7L1T6 521 aa16.34■□□□□ 0.21
ATG4D-206ENST00000586863 DEFB128Q7Z7B8 93 aa16.34■□□□□ 0.21
ATG4D-206ENST00000586863 FBXO11Q86XK2 927 aa16.34■□□□□ 0.21
ATG4D-206ENST00000586863 NSUN6Q8TEA1 469 aaKnown RBP16.34■□□□□ 0.21
ATG4D-206ENST00000586863 AFG1LQ8WV93 481 aa16.34■□□□□ 0.21
ATG4D-206ENST00000586863 RMDN3Q96TC7 470 aa16.34■□□□□ 0.21
ATG4D-206ENST00000586863 GAS2L1Q99501 681 aaPredicted RBP16.34■□□□□ 0.21
ATG4D-206ENST00000586863 MAF1Q9H063 256 aa16.34■□□□□ 0.21
ATG4D-206ENST00000586863 CNNM2Q9H8M5 875 aa16.34■□□□□ 0.21
ATG4D-206ENST00000586863 PRDM6Q9NQX0 595 aa16.34■□□□□ 0.21
ATG4D-206ENST00000586863 MRPL11Q9Y3B7 192 aaKnown RBP16.34■□□□□ 0.21
ATG4D-206ENST00000586863 BDP1A6H8Y1 2624 aa16.33■□□□□ 0.21
ATG4D-206ENST00000586863 ZBBXA8MT70 800 aa16.33■□□□□ 0.2
ATG4D-206ENST00000586863 OPLAHO14841 1288 aa16.33■□□□□ 0.2
ATG4D-206ENST00000586863 KPNA6O60684 536 aa16.33■□□□□ 0.2
ATG4D-206ENST00000586863 MMP3P08254 477 aa16.33■□□□□ 0.2
ATG4D-206ENST00000586863 MYOGP15173 224 aa16.33■□□□□ 0.2
ATG4D-206ENST00000586863 ARHGAP1Q07960 439 aa16.33■□□□□ 0.2
ATG4D-206ENST00000586863 SEC23AQ15436 765 aa16.33■□□□□ 0.2
ATG4D-206ENST00000586863 LY6KQ17RY6 165 aa16.33■□□□□ 0.2
ATG4D-206ENST00000586863 TTC22Q5TAA0 569 aa16.33■□□□□ 0.2
ATG4D-206ENST00000586863 MCF2L2Q86YR7 1114 aa16.33■□□□□ 0.2
ATG4D-206ENST00000586863 SLC4A7Q9Y6M7 1214 aa16.33■□□□□ 0.2
ATG4D-206ENST00000586863 PTPRSQ13332 1948 aa16.33■□□□□ 0.2
ATG4D-206ENST00000586863 PPP1R11O60927 126 aaPredicted RBP16.32■□□□□ 0.2
ATG4D-206ENST00000586863 GH1P01241 217 aa16.32■□□□□ 0.2
ATG4D-206ENST00000586863 PFKMP08237 780 aa16.32■□□□□ 0.2
ATG4D-206ENST00000586863 EIF2AK2P19525 551 aaKnown RBP16.32■□□□□ 0.2
ATG4D-206ENST00000586863 CHMP4BP1P59074 171 aa16.32■□□□□ 0.2
ATG4D-206ENST00000586863 PTPN11Q06124 597 aaPredicted RBP16.32■□□□□ 0.2
ATG4D-206ENST00000586863 PPM1EQ8WY54 764 aa16.32■□□□□ 0.2
ATG4D-206ENST00000586863 IWS1Q96ST2 819 aa16.32■□□□□ 0.2
ATG4D-206ENST00000586863 BRWD1Q9NSI6 2320 aa16.32■□□□□ 0.2
ATG4D-206ENST00000586863 PITPNM1O00562 1244 aa16.31■□□□□ 0.2
ATG4D-206ENST00000586863 CFBP00751 764 aa16.31■□□□□ 0.2
ATG4D-206ENST00000586863 ATP2A2P16615 1042 aaKnown RBP16.31■□□□□ 0.2
ATG4D-206ENST00000586863 STXBP2Q15833 593 aa16.31■□□□□ 0.2
ATG4D-206ENST00000586863 SLC35G1Q2M3R5 365 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms