RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 RGL3Q3MIN7 710 aa8.14□□□□□ -1.11
TPM4-203ENST00000586193 ACBD5Q5T8D3 534 aaPredicted RBP8.14□□□□□ -1.11
TPM4-203ENST00000586193 RSPO2Q6UXX9 243 aaPredicted RBP8.14□□□□□ -1.11
TPM4-203ENST00000586193 C1orf229Q6ZS94 237 aaPredicted RBP8.14□□□□□ -1.11
TPM4-203ENST00000586193 TMC3Q7Z5M5 1100 aa8.14□□□□□ -1.11
TPM4-203ENST00000586193 C12orf50Q8NA57 414 aaPredicted RBP8.14□□□□□ -1.11
TPM4-203ENST00000586193 SMG8Q8ND04 991 aaKnown RBP8.14□□□□□ -1.11
TPM4-203ENST00000586193 NPLOC4Q8TAT6 608 aa8.14□□□□□ -1.11
TPM4-203ENST00000586193 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.14□□□□□ -1.11
TPM4-203ENST00000586193 UBE2Q2Q8WVN8 375 aa8.14□□□□□ -1.11
TPM4-203ENST00000586193 COPS5Q92905 334 aa8.14□□□□□ -1.11
TPM4-203ENST00000586193 SLC5A5Q92911 643 aa8.14□□□□□ -1.11
TPM4-203ENST00000586193 CELF4Q9BZC1 486 aaKnown RBP8.14□□□□□ -1.11
TPM4-203ENST00000586193 SLC12A5Q9H2X9 1139 aa8.14□□□□□ -1.11
TPM4-203ENST00000586193 SUGCTQ9HAC7 445 aa8.14□□□□□ -1.11
TPM4-203ENST00000586193 PRR13Q9NZ81 148 aa8.14□□□□□ -1.11
TPM4-203ENST00000586193 PUF60Q9UHX1 559 aaKnown RBP8.14□□□□□ -1.11
TPM4-203ENST00000586193 ACTL7BQ9Y614 415 aa8.14□□□□□ -1.11
TPM4-203ENST00000586193 MEFVO15553 781 aaPredicted RBP8.13□□□□□ -1.11
TPM4-203ENST00000586193 PCDHGA12O60330 932 aa8.13□□□□□ -1.11
TPM4-203ENST00000586193 SLITRK5O94991 958 aa8.13□□□□□ -1.11
TPM4-203ENST00000586193 ASGR2P07307 311 aa8.13□□□□□ -1.11
TPM4-203ENST00000586193 PHKG2P15735 406 aa8.13□□□□□ -1.11
TPM4-203ENST00000586193 DNM2P50570 870 aa8.13□□□□□ -1.11
TPM4-203ENST00000586193 PAK1Q13153 545 aa8.13□□□□□ -1.11
TPM4-203ENST00000586193 DDB1Q16531 1140 aa8.13□□□□□ -1.11
TPM4-203ENST00000586193 FAM83BQ5T0W9 1011 aa8.13□□□□□ -1.11
TPM4-203ENST00000586193 KIAA1211Q6ZU35 1233 aa8.13□□□□□ -1.11
TPM4-203ENST00000586193 CHSY3Q70JA7 882 aa8.13□□□□□ -1.11
TPM4-203ENST00000586193 CMIPQ8IY22 773 aa8.13□□□□□ -1.11
TPM4-203ENST00000586193 GPR161Q8N6U8 529 aaKnown RBP8.13□□□□□ -1.11
TPM4-203ENST00000586193 ELAC2Q9BQ52 826 aaKnown RBP8.13□□□□□ -1.11
TPM4-203ENST00000586193 RNF208Q9H0X6 261 aa8.13□□□□□ -1.11
TPM4-203ENST00000586193 MAN1C1Q9NR34 630 aa8.13□□□□□ -1.11
TPM4-203ENST00000586193 GPR27Q9NS67 375 aa8.13□□□□□ -1.11
TPM4-203ENST00000586193 RNF112Q9ULX5 631 aa8.13□□□□□ -1.11
TPM4-203ENST00000586193 PCDHGA9Q9Y5G4 932 aaKnown RBP8.13□□□□□ -1.11
TPM4-203ENST00000586193 PCDHGA8Q9Y5G5 932 aa8.13□□□□□ -1.11
TPM4-203ENST00000586193 PCDHGA7Q9Y5G6 932 aa8.13□□□□□ -1.11
TPM4-203ENST00000586193 PCDHGA6Q9Y5G7 932 aa8.13□□□□□ -1.11
TPM4-203ENST00000586193 PCDHGA3Q9Y5H0 932 aa8.13□□□□□ -1.11
TPM4-203ENST00000586193 PCDHGA2Q9Y5H1 932 aa8.13□□□□□ -1.11
TPM4-203ENST00000586193 NPFFR2Q9Y5X5 522 aa8.13□□□□□ -1.11
TPM4-203ENST00000586193 ST14Q9Y5Y6 855 aa8.13□□□□□ -1.11
TPM4-203ENST00000586193 RASSF10A6NK89 507 aa8.12□□□□□ -1.11
TPM4-203ENST00000586193 XPOTO43592 962 aaKnown RBP8.12□□□□□ -1.11
TPM4-203ENST00000586193 CD3EP07766 207 aa8.12□□□□□ -1.11
TPM4-203ENST00000586193 LCP1P13796 627 aa8.12□□□□□ -1.11
TPM4-203ENST00000586193 NID1P14543 1247 aa8.12□□□□□ -1.11
TPM4-203ENST00000586193 SCAND1P57086 179 aa8.12□□□□□ -1.11
TPM4-203ENST00000586193 HTRA3P83110 453 aa8.12□□□□□ -1.11
TPM4-203ENST00000586193 POU4F1Q01851 419 aa8.12□□□□□ -1.11
TPM4-203ENST00000586193 RAPGEF1Q13905 1077 aa8.12□□□□□ -1.11
TPM4-203ENST00000586193 BROXQ5VW32 411 aa8.12□□□□□ -1.11
TPM4-203ENST00000586193 GPAT2Q6NUI2 795 aa8.12□□□□□ -1.11
TPM4-203ENST00000586193 ERAP2Q6P179 960 aa8.12□□□□□ -1.11
TPM4-203ENST00000586193 LBX2Q6XYB7 198 aa8.12□□□□□ -1.11
TPM4-203ENST00000586193 ACAD11Q709F0 780 aa8.12□□□□□ -1.11
TPM4-203ENST00000586193 OVCH1Q7RTY7 1134 aa8.12□□□□□ -1.11
TPM4-203ENST00000586193 VPS37AQ8NEZ2 397 aa8.12□□□□□ -1.11
TPM4-203ENST00000586193 AIFM3Q96NN9 605 aa8.12□□□□□ -1.11
TPM4-203ENST00000586193 NAP1L4Q99733 375 aaKnown RBP8.12□□□□□ -1.11
TPM4-203ENST00000586193 ALG1Q9BT22 464 aa8.12□□□□□ -1.11
TPM4-203ENST00000586193 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.12□□□□□ -1.11
TPM4-203ENST00000586193 CHST7Q9NS84 486 aa8.12□□□□□ -1.11
TPM4-203ENST00000586193 OXSMQ9NWU1 459 aa8.12□□□□□ -1.11
TPM4-203ENST00000586193 MRFAP1Q9Y605 127 aa8.12□□□□□ -1.11
TPM4-203ENST00000586193 C2orf71A6NGG8 1288 aa8.11□□□□□ -1.11
TPM4-203ENST00000586193 NPHP1O15259 732 aa8.11□□□□□ -1.11
TPM4-203ENST00000586193 PRAMEF1O95521 474 aa8.11□□□□□ -1.11
TPM4-203ENST00000586193 RBM10P98175 930 aaKnown RBP8.11□□□□□ -1.11
TPM4-203ENST00000586193 COL9A3Q14050 684 aaPredicted RBP8.11□□□□□ -1.11
TPM4-203ENST00000586193 LRRC32Q14392 662 aa8.11□□□□□ -1.11
TPM4-203ENST00000586193 GPR158Q5T848 1215 aa8.11□□□□□ -1.11
TPM4-203ENST00000586193 CCDC103Q8IW40 242 aa8.11□□□□□ -1.11
TPM4-203ENST00000586193 CISD2Q8N5K1 135 aaKnown RBP8.11□□□□□ -1.11
TPM4-203ENST00000586193 C2CD4AQ8NCU7 369 aaPredicted RBP8.11□□□□□ -1.11
TPM4-203ENST00000586193 MYRIPQ8NFW9 859 aa8.11□□□□□ -1.11
TPM4-203ENST00000586193 DCAF11Q8TEB1 546 aa8.11□□□□□ -1.11
TPM4-203ENST00000586193 PARD3BQ8TEW8 1205 aa8.11□□□□□ -1.11
TPM4-203ENST00000586193 TTC17Q96AE7 1141 aa8.11□□□□□ -1.11
TPM4-203ENST00000586193 ZNF652Q9Y2D9 606 aa8.11□□□□□ -1.11
TPM4-203ENST00000586193 CCDC66A2RUB6 948 aa8.1□□□□□ -1.11
TPM4-203ENST00000586193 AURKAO14965 403 aa8.1□□□□□ -1.11
TPM4-203ENST00000586193 TBX3O15119 743 aa8.1□□□□□ -1.11
TPM4-203ENST00000586193 PMM2O15305 246 aa8.1□□□□□ -1.11
TPM4-203ENST00000586193 TGM5O43548 720 aa8.1□□□□□ -1.11
TPM4-203ENST00000586193 SIGLEC6O43699 453 aa8.1□□□□□ -1.11
TPM4-203ENST00000586193 TCEA3O75764 348 aa8.1□□□□□ -1.11
TPM4-203ENST00000586193 TIAF1O95411 115 aa8.1□□□□□ -1.11
TPM4-203ENST00000586193 LTBRP36941 435 aa8.1□□□□□ -1.11
TPM4-203ENST00000586193 KRT85P78386 507 aa8.1□□□□□ -1.11
TPM4-203ENST00000586193 EFCAB2Q5VUJ9 269 aa8.1□□□□□ -1.11
TPM4-203ENST00000586193 CREB3L3Q68CJ9 461 aa8.1□□□□□ -1.11
TPM4-203ENST00000586193 EDARADDQ8WWZ3 215 aa8.1□□□□□ -1.11
TPM4-203ENST00000586193 DIO2Q92813 273 aa8.1□□□□□ -1.11
TPM4-203ENST00000586193 RUNDC1Q96C34 613 aa8.1□□□□□ -1.11
TPM4-203ENST00000586193 BTBD6Q96KE9 485 aa8.1□□□□□ -1.11
TPM4-203ENST00000586193 NUP88Q99567 741 aaPredicted RBP8.1□□□□□ -1.11
TPM4-203ENST00000586193 LGR6Q9HBX8 967 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms