RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 SCNN1BP51168 640 aa11.03□□□□□ -0.64
ZNF540-203ENST00000586134 FMR1Q06787 632 aaKnown RBP eCLIP11.03□□□□□ -0.64
ZNF540-203ENST00000586134 CUL4BQ13620 913 aa11.03□□□□□ -0.64
ZNF540-203ENST00000586134 SCARF1Q14162 830 aa11.03□□□□□ -0.64
ZNF540-203ENST00000586134 INF2Q27J81 1249 aa11.03□□□□□ -0.64
ZNF540-203ENST00000586134 SEPT14Q6ZU15 432 aa11.03□□□□□ -0.64
ZNF540-203ENST00000586134 CCDC121Q6ZUS5 278 aa11.03□□□□□ -0.64
ZNF540-203ENST00000586134 C2orf69Q8N8R5 385 aa11.03□□□□□ -0.64
ZNF540-203ENST00000586134 SLC35B4Q969S0 331 aa11.03□□□□□ -0.64
ZNF540-203ENST00000586134 DHX58Q96C10 678 aa11.03□□□□□ -0.64
ZNF540-203ENST00000586134 BPIFA3Q9BQP9 254 aa11.03□□□□□ -0.64
ZNF540-203ENST00000586134 NACA2Q9H009 215 aa11.03□□□□□ -0.64
ZNF540-203ENST00000586134 GBA2Q9HCG7 927 aaPredicted RBP11.03□□□□□ -0.64
ZNF540-203ENST00000586134 LUC7LQ9NQ29 371 aaKnown RBP11.03□□□□□ -0.64
ZNF540-203ENST00000586134 WDR35Q9P2L0 1181 aa11.03□□□□□ -0.64
ZNF540-203ENST00000586134 MTMR6Q9Y217 621 aa11.03□□□□□ -0.64
ZNF540-203ENST00000586134 SAMM50Q9Y512 469 aa11.03□□□□□ -0.64
ZNF540-203ENST00000586134 AKAP11Q9UKA4 1901 aa11.03□□□□□ -0.64
ZNF540-203ENST00000586134 ZBTB7BO15156 539 aaPredicted RBP11.02□□□□□ -0.64
ZNF540-203ENST00000586134 IBSPP21815 317 aaPredicted RBP11.02□□□□□ -0.64
ZNF540-203ENST00000586134 KLRK1P26718 216 aa11.02□□□□□ -0.64
ZNF540-203ENST00000586134 PSMC4P43686 418 aa11.02□□□□□ -0.64
ZNF540-203ENST00000586134 VSNL1P62760 191 aa11.02□□□□□ -0.64
ZNF540-203ENST00000586134 RNF187Q5TA31 235 aaPredicted RBP11.02□□□□□ -0.64
ZNF540-203ENST00000586134 TMC6Q7Z403 805 aa11.02□□□□□ -0.64
ZNF540-203ENST00000586134 TTC6Q86TZ1 520 aa11.02□□□□□ -0.64
ZNF540-203ENST00000586134 DHX40Q8IX18 779 aaKnown RBP11.02□□□□□ -0.64
ZNF540-203ENST00000586134 ERMNQ8TAM6 284 aa11.02□□□□□ -0.64
ZNF540-203ENST00000586134 COG1Q8WTW3 980 aa11.02□□□□□ -0.64
ZNF540-203ENST00000586134 TRAIPQ9BWF2 469 aa11.02□□□□□ -0.64
ZNF540-203ENST00000586134 BRD8Q9H0E9 1235 aa11.02□□□□□ -0.64
ZNF540-203ENST00000586134 SENP2Q9HC62 589 aa11.02□□□□□ -0.64
ZNF540-203ENST00000586134 NOP53Q9NZM5 478 aaKnown RBP11.02□□□□□ -0.64
ZNF540-203ENST00000586134 ATXN10Q9UBB4 475 aa11.02□□□□□ -0.64
ZNF540-203ENST00000586134 PPP2R2CQ9Y2T4 447 aa11.02□□□□□ -0.64
ZNF540-203ENST00000586134 LRRD1A4D1F6 860 aa11.02□□□□□ -0.65
ZNF540-203ENST00000586134 TAF5LO75529 589 aa11.02□□□□□ -0.65
ZNF540-203ENST00000586134 DNAJC8O75937 253 aaPredicted RBP11.02□□□□□ -0.65
ZNF540-203ENST00000586134 KRT38O76015 456 aa11.02□□□□□ -0.65
ZNF540-203ENST00000586134 FAM200BP0CF97 657 aa11.02□□□□□ -0.65
ZNF540-203ENST00000586134 IDO1P14902 403 aa11.02□□□□□ -0.65
ZNF540-203ENST00000586134 NOGQ13253 232 aa11.02□□□□□ -0.65
ZNF540-203ENST00000586134 GNPTABQ3T906 1256 aa11.02□□□□□ -0.65
ZNF540-203ENST00000586134 PABPC1LQ4VXU2 614 aaKnown RBP11.02□□□□□ -0.65
ZNF540-203ENST00000586134 C6orf89Q6UWU4 347 aa11.02□□□□□ -0.65
ZNF540-203ENST00000586134 SYNE3Q6ZMZ3 975 aa11.02□□□□□ -0.65
ZNF540-203ENST00000586134 ATP11CQ8NB49 1132 aa11.02□□□□□ -0.65
ZNF540-203ENST00000586134 KCNN1Q92952 543 aa11.02□□□□□ -0.65
ZNF540-203ENST00000586134 NUP58Q9BVL2 599 aa11.02□□□□□ -0.65
ZNF540-203ENST00000586134 GPR75-ASB3A0A0A6YYF3 556 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 TMEM232C9JQI7 657 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 WNT10BO00744 389 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 FOXN1O15353 648 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 HMMRO75330 724 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 ZNF202O95125 648 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 ATP6V1G2O95670 118 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 CCDC175P0C221 793 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 EPB41P11171 864 aaKnown RBP11.01□□□□□ -0.65
ZNF540-203ENST00000586134 GNAQP50148 359 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 INHBCP55103 352 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 GTF2IP78347 998 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 MYO1EQ12965 1108 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 LBRQ14739 615 aaKnown RBP11.01□□□□□ -0.65
ZNF540-203ENST00000586134 WHAMMP3Q1A5X7 153 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 LACTB2Q53H82 288 aaPredicted RBP11.01□□□□□ -0.65
ZNF540-203ENST00000586134 ANGEL2Q5VTE6 544 aaKnown RBP11.01□□□□□ -0.65
ZNF540-203ENST00000586134 CYP4F22Q6NT55 531 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 SESTD1Q86VW0 696 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 APOBEC3FQ8IUX4 373 aaKnown RBP11.01□□□□□ -0.65
ZNF540-203ENST00000586134 CCAR1Q8IX12 1150 aaKnown RBP11.01□□□□□ -0.65
ZNF540-203ENST00000586134 REM2Q8IYK8 340 aaPredicted RBP11.01□□□□□ -0.65
ZNF540-203ENST00000586134 STAG2Q8N3U4 1231 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 VGLL2Q8N8G2 317 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 CDCA5Q96FF9 252 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 ZNF594Q96JF6 807 aaPredicted RBP11.01□□□□□ -0.65
ZNF540-203ENST00000586134 WDR24Q96S15 920 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 IWS1Q96ST2 819 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 EPN3Q9H201 632 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 DCTPP1Q9H773 170 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 SUGCTQ9HAC7 445 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 NOD2Q9HC29 1040 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 TUBA8Q9NY65 449 aaPredicted RBP11.01□□□□□ -0.65
ZNF540-203ENST00000586134 CIDEBQ9UHD4 219 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 ASB3Q9Y575 518 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 ADM5C9JUS6 153 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 PARP1P09874 1014 aaKnown RBP11.01□□□□□ -0.65
ZNF540-203ENST00000586134 RHBDL3P58872 404 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 CLPPQ16740 277 aaPredicted RBP11.01□□□□□ -0.65
ZNF540-203ENST00000586134 ACCSLQ4AC99 568 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 COL13A1Q5TAT6 717 aaPredicted RBP11.01□□□□□ -0.65
ZNF540-203ENST00000586134 RGMBQ6NW40 437 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 SYCP3Q8IZU3 236 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 ARL10Q8N8L6 244 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 TEKT4Q8WW24 435 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 TTC14Q96N46 770 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 PAIP2BQ9ULR5 123 aaKnown RBP11.01□□□□□ -0.65
ZNF540-203ENST00000586134 MAPK8IP1Q9UQF2 711 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 PPP2R3BQ9Y5P8 575 aa11.01□□□□□ -0.65
ZNF540-203ENST00000586134 CTAGE15A4D2H0 777 aa11□□□□□ -0.65
ZNF540-203ENST00000586134 KIF4AO95239 1232 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms