RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 PITPNM1O00562 1244 aa16.99■□□□□ 0.31
SDF2-202ENST00000585428 TXNP10599 105 aaKnown RBP16.99■□□□□ 0.31
SDF2-202ENST00000585428 RFC2P35250 354 aa16.99■□□□□ 0.31
SDF2-202ENST00000585428 RRP1P56182 461 aaKnown RBP16.99■□□□□ 0.31
SDF2-202ENST00000585428 PPP2R5BQ15173 497 aa16.99■□□□□ 0.31
SDF2-202ENST00000585428 GPATCH4Q5T3I0 446 aaKnown RBP16.99■□□□□ 0.31
SDF2-202ENST00000585428 PPP2R2DQ66LE6 453 aa16.99■□□□□ 0.31
SDF2-202ENST00000585428 DEFB128Q7Z7B8 93 aa16.99■□□□□ 0.31
SDF2-202ENST00000585428 TBC1D10CQ8IV04 446 aa16.99■□□□□ 0.31
SDF2-202ENST00000585428 PHOSPHO2Q8TCD6 241 aa16.99■□□□□ 0.31
SDF2-202ENST00000585428 TBC1D5Q92609 795 aa16.99■□□□□ 0.31
SDF2-202ENST00000585428 ANKS1AQ92625 1134 aa16.99■□□□□ 0.31
SDF2-202ENST00000585428 MPHOSPH6Q99547 160 aaKnown RBP16.99■□□□□ 0.31
SDF2-202ENST00000585428 UBA5Q9GZZ9 404 aa16.99■□□□□ 0.31
SDF2-202ENST00000585428 REV3LO60673 3130 aa16.99■□□□□ 0.31
SDF2-202ENST00000585428 B4DLN1 442 aa16.98■□□□□ 0.31
SDF2-202ENST00000585428 ARIH2O95376 493 aa16.98■□□□□ 0.31
SDF2-202ENST00000585428 GOLGA8HP0CJ92 632 aa16.98■□□□□ 0.31
SDF2-202ENST00000585428 MRPL12P52815 198 aaKnown RBP16.98■□□□□ 0.31
SDF2-202ENST00000585428 TMEM67Q5HYA8 995 aa16.98■□□□□ 0.31
SDF2-202ENST00000585428 PPP1R13LQ8WUF5 828 aa16.98■□□□□ 0.31
SDF2-202ENST00000585428 CRBNQ96SW2 442 aa16.98■□□□□ 0.31
SDF2-202ENST00000585428 XIRP2A4UGR9 3374 aa16.98■□□□□ 0.31
SDF2-202ENST00000585428 CCDC171Q6TFL3 1326 aa16.97■□□□□ 0.31
SDF2-202ENST00000585428 RAD50Q92878 1312 aa16.97■□□□□ 0.31
SDF2-202ENST00000585428 LRRC37A2A6NM11 1700 aa16.97■□□□□ 0.31
SDF2-202ENST00000585428 BMP1P13497 986 aa16.97■□□□□ 0.31
SDF2-202ENST00000585428 SDSP20132 328 aa16.97■□□□□ 0.31
SDF2-202ENST00000585428 GPNMBQ14956 572 aa16.97■□□□□ 0.31
SDF2-202ENST00000585428 RETREG2Q8NC44 543 aa16.97■□□□□ 0.31
SDF2-202ENST00000585428 ADAMTS19Q8TE59 1207 aa16.97■□□□□ 0.31
SDF2-202ENST00000585428 ESR2Q92731 530 aa16.97■□□□□ 0.31
SDF2-202ENST00000585428 CTAGE1Q96RT6 745 aa16.97■□□□□ 0.31
SDF2-202ENST00000585428 ZKSCAN3Q9BRR0 538 aa16.97■□□□□ 0.31
SDF2-202ENST00000585428 CPVLQ9H3G5 476 aa16.97■□□□□ 0.31
SDF2-202ENST00000585428 RNF41Q9H4P4 317 aaPredicted RBP16.97■□□□□ 0.31
SDF2-202ENST00000585428 LCTP09848 1927 aa16.97■□□□□ 0.31
SDF2-202ENST00000585428 RFXAPO00287 272 aa16.96■□□□□ 0.31
SDF2-202ENST00000585428 ZNF213O14771 459 aa16.96■□□□□ 0.31
SDF2-202ENST00000585428 CA3P07451 260 aa16.96■□□□□ 0.31
SDF2-202ENST00000585428 ACTN1P12814 892 aa16.96■□□□□ 0.31
SDF2-202ENST00000585428 NT5C2P49902 561 aa16.96■□□□□ 0.31
SDF2-202ENST00000585428 USH1GQ495M9 461 aa16.96■□□□□ 0.31
SDF2-202ENST00000585428 FAM47CQ5HY64 1035 aa16.96■□□□□ 0.31
SDF2-202ENST00000585428 RILPL2Q969X0 211 aa16.96■□□□□ 0.31
SDF2-202ENST00000585428 TAAR1Q96RJ0 339 aa16.96■□□□□ 0.31
SDF2-202ENST00000585428 MTCH2Q9Y6C9 303 aa16.96■□□□□ 0.31
SDF2-202ENST00000585428 TRIM6-TRIM34B2RNG4 842 aa16.95■□□□□ 0.3
SDF2-202ENST00000585428 MFAP1P55081 439 aaKnown RBP16.95■□□□□ 0.3
SDF2-202ENST00000585428 BFSP2Q13515 415 aa16.95■□□□□ 0.3
SDF2-202ENST00000585428 LY6KQ17RY6 165 aa16.95■□□□□ 0.3
SDF2-202ENST00000585428 CCDC178Q5BJE1 867 aa16.95■□□□□ 0.3
SDF2-202ENST00000585428 SESTD1Q86VW0 696 aa16.95■□□□□ 0.3
SDF2-202ENST00000585428 ADGRF4Q8IZF3 695 aa16.95■□□□□ 0.3
SDF2-202ENST00000585428 SYTL5Q8TDW5 730 aaPredicted RBP16.95■□□□□ 0.3
SDF2-202ENST00000585428 NSUN6Q8TEA1 469 aaKnown RBP16.95■□□□□ 0.3
SDF2-202ENST00000585428 AFG1LQ8WV93 481 aa16.95■□□□□ 0.3
SDF2-202ENST00000585428 KAT2BQ92831 832 aa16.95■□□□□ 0.3
SDF2-202ENST00000585428 IWS1Q96ST2 819 aa16.95■□□□□ 0.3
SDF2-202ENST00000585428 SLC9A7Q96T83 725 aa16.95■□□□□ 0.3
SDF2-202ENST00000585428 TSPYL2Q9H2G4 693 aaPredicted RBP16.95■□□□□ 0.3
SDF2-202ENST00000585428 OSBPL3Q9H4L5 887 aa16.95■□□□□ 0.3
SDF2-202ENST00000585428 COL20A1Q9P218 1284 aa16.95■□□□□ 0.3
SDF2-202ENST00000585428 NEDD4P46934 1319 aa16.95■□□□□ 0.3
SDF2-202ENST00000585428 TTC28Q96AY4 2481 aa16.94■□□□□ 0.3
SDF2-202ENST00000585428 EPOPA6NHQ4 379 aa16.94■□□□□ 0.3
SDF2-202ENST00000585428 TAP1Q03518 808 aa16.94■□□□□ 0.3
SDF2-202ENST00000585428 ARHGAP1Q07960 439 aa16.94■□□□□ 0.3
SDF2-202ENST00000585428 PTGISQ16647 500 aa16.94■□□□□ 0.3
SDF2-202ENST00000585428 HERC6Q8IVU3 1022 aa16.94■□□□□ 0.3
SDF2-202ENST00000585428 SMC5Q8IY18 1101 aa16.94■□□□□ 0.3
SDF2-202ENST00000585428 PNMA1Q8ND90 353 aa16.94■□□□□ 0.3
SDF2-202ENST00000585428 UHRF1Q96T88 793 aaPredicted RBP16.94■□□□□ 0.3
SDF2-202ENST00000585428 FTOQ9C0B1 505 aaKnown RBP eCLIP16.94■□□□□ 0.3
SDF2-202ENST00000585428 LNPKQ9C0E8 428 aa16.94■□□□□ 0.3
SDF2-202ENST00000585428 ZSWIM5Q9P217 1185 aa16.94■□□□□ 0.3
SDF2-202ENST00000585428 KDM4AO75164 1064 aa16.93■□□□□ 0.3
SDF2-202ENST00000585428 ARHGEF15O94989 841 aa16.93■□□□□ 0.3
SDF2-202ENST00000585428 COL9A1P20849 921 aa16.93■□□□□ 0.3
SDF2-202ENST00000585428 STXBP2Q15833 593 aa16.93■□□□□ 0.3
SDF2-202ENST00000585428 CDC37Q16543 378 aaPredicted RBP16.93■□□□□ 0.3
SDF2-202ENST00000585428 GDF6Q6KF10 455 aaPredicted RBP16.93■□□□□ 0.3
SDF2-202ENST00000585428 SEPT14Q6ZU15 432 aa16.93■□□□□ 0.3
SDF2-202ENST00000585428 IQCA1Q86XH1 822 aa16.93■□□□□ 0.3
SDF2-202ENST00000585428 MCF2L2Q86YR7 1114 aa16.93■□□□□ 0.3
SDF2-202ENST00000585428 PLEKHM2Q8IWE5 1019 aa16.93■□□□□ 0.3
SDF2-202ENST00000585428 DDX41Q9UJV9 622 aaKnown RBP16.93■□□□□ 0.3
SDF2-202ENST00000585428 ABCB11O95342 1321 aa16.93■□□□□ 0.3
SDF2-202ENST00000585428 KIF28PB7ZC32 967 aa16.92■□□□□ 0.3
SDF2-202ENST00000585428 EIF3JO75822 258 aaKnown RBP16.92■□□□□ 0.3
SDF2-202ENST00000585428 BAIAP3O94812 1187 aa16.92■□□□□ 0.3
SDF2-202ENST00000585428 GH1P01241 217 aa16.92■□□□□ 0.3
SDF2-202ENST00000585428 MMP3P08254 477 aa16.92■□□□□ 0.3
SDF2-202ENST00000585428 CASTP20810 708 aaKnown RBP16.92■□□□□ 0.3
SDF2-202ENST00000585428 TFF2Q03403 129 aa16.92■□□□□ 0.3
SDF2-202ENST00000585428 C1QBPQ07021 282 aaKnown RBP16.92■□□□□ 0.3
SDF2-202ENST00000585428 CAGE1Q8TC20 777 aa16.92■□□□□ 0.3
SDF2-202ENST00000585428 ZSCAN10Q96SZ4 725 aaPredicted RBP16.92■□□□□ 0.3
SDF2-202ENST00000585428 RMDN3Q96TC7 470 aa16.92■□□□□ 0.3
SDF2-202ENST00000585428 KAT14Q9H8E8 782 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms