RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 PORCNQ9H237 461 aa18.39■□□□□ 0.53
SS18-226ENST00000585241 CYP3A7-CYP3A51PA0A087WV96 503 aa18.38■□□□□ 0.53
SS18-226ENST00000585241 FIBPO43427 364 aa18.38■□□□□ 0.53
SS18-226ENST00000585241 GCFC2P16383 781 aaKnown RBP18.38■□□□□ 0.53
SS18-226ENST00000585241 NCLP19338 710 aaKnown RBP18.38■□□□□ 0.53
SS18-226ENST00000585241 CYP3A7P24462 503 aa18.38■□□□□ 0.53
SS18-226ENST00000585241 MCM4P33991 863 aa18.38■□□□□ 0.53
SS18-226ENST00000585241 VEGFBP49765 207 aa18.38■□□□□ 0.53
SS18-226ENST00000585241 ARHGAP4P98171 946 aa18.38■□□□□ 0.53
SS18-226ENST00000585241 GRM1Q13255 1194 aa18.38■□□□□ 0.53
SS18-226ENST00000585241 NBR1Q14596 966 aa18.38■□□□□ 0.53
SS18-226ENST00000585241 SLC39A14Q15043 492 aa18.38■□□□□ 0.53
SS18-226ENST00000585241 CSPP1Q1MSJ5 1256 aa18.38■□□□□ 0.53
SS18-226ENST00000585241 PPP4R3AQ6IN85 833 aa18.38■□□□□ 0.53
SS18-226ENST00000585241 FCHSD1Q86WN1 690 aa18.38■□□□□ 0.53
SS18-226ENST00000585241 R3HDMLQ9H3Y0 253 aa18.38■□□□□ 0.53
SS18-226ENST00000585241 CEP131Q9UPN4 1083 aa18.38■□□□□ 0.53
SS18-226ENST00000585241 DNAJC25-GNG10A0A024R161 153 aa18.37■□□□□ 0.53
SS18-226ENST00000585241 CRHR2Q13324 411 aa18.37■□□□□ 0.53
SS18-226ENST00000585241 ABRAQ8N0Z2 381 aa18.37■□□□□ 0.53
SS18-226ENST00000585241 KCNG4Q8TDN1 519 aa18.37■□□□□ 0.53
SS18-226ENST00000585241 SPATA32Q96LK8 384 aa18.37■□□□□ 0.53
SS18-226ENST00000585241 TAAR1Q96RJ0 339 aa18.37■□□□□ 0.53
SS18-226ENST00000585241 EFCC1Q9HA90 598 aa18.37■□□□□ 0.53
SS18-226ENST00000585241 CPA4Q9UI42 421 aa18.37■□□□□ 0.53
SS18-226ENST00000585241 ZNF236Q9UL36 1845 aa18.37■□□□□ 0.53
SS18-226ENST00000585241 GOLGA6L22H0YM25 854 aa18.36■□□□□ 0.53
SS18-226ENST00000585241 PPP6R2O75170 966 aa18.36■□□□□ 0.53
SS18-226ENST00000585241 MAPK4P31152 587 aa18.36■□□□□ 0.53
SS18-226ENST00000585241 ATP2C1P98194 919 aaPredicted RBP18.36■□□□□ 0.53
SS18-226ENST00000585241 STK38Q15208 465 aa18.36■□□□□ 0.53
SS18-226ENST00000585241 LETM2Q2VYF4 491 aa18.36■□□□□ 0.53
SS18-226ENST00000585241 ANKRD35Q8N283 1001 aa18.36■□□□□ 0.53
SS18-226ENST00000585241 C4orf32Q8N8J7 132 aa18.36■□□□□ 0.53
SS18-226ENST00000585241 FAM133AQ8N9E0 248 aa18.36■□□□□ 0.53
SS18-226ENST00000585241 DNERQ8NFT8 737 aa18.36■□□□□ 0.53
SS18-226ENST00000585241 GDPD2Q9HCC8 539 aa18.36■□□□□ 0.53
SS18-226ENST00000585241 PXMP2Q9NR77 195 aa18.36■□□□□ 0.53
SS18-226ENST00000585241 DDX11L8A8MPP1 907 aa18.35■□□□□ 0.53
SS18-226ENST00000585241 SPTLC2O15270 562 aa18.35■□□□□ 0.53
SS18-226ENST00000585241 STRNO43815 780 aa18.35■□□□□ 0.53
SS18-226ENST00000585241 TDP2O95551 362 aa18.35■□□□□ 0.53
SS18-226ENST00000585241 ATP2B1P20020 1258 aa18.35■□□□□ 0.53
SS18-226ENST00000585241 HTRA3P83110 453 aa18.35■□□□□ 0.53
SS18-226ENST00000585241 CEBPZQ03701 1054 aaKnown RBP18.35■□□□□ 0.53
SS18-226ENST00000585241 KCTD2Q14681 263 aa18.35■□□□□ 0.53
SS18-226ENST00000585241 ZNF174Q15697 407 aa18.35■□□□□ 0.53
SS18-226ENST00000585241 XRRA1Q6P2D8 792 aa18.35■□□□□ 0.53
SS18-226ENST00000585241 RMDN3Q96TC7 470 aa18.35■□□□□ 0.53
SS18-226ENST00000585241 MMP19Q99542 508 aa18.35■□□□□ 0.53
SS18-226ENST00000585241 PDCD2LQ9BRP1 358 aa18.35■□□□□ 0.53
SS18-226ENST00000585241 LOC102724159A0A0B4J2E5 919 aa18.34■□□□□ 0.53
SS18-226ENST00000585241 LAD1O00515 517 aa18.34■□□□□ 0.53
SS18-226ENST00000585241 CCNT1O60563 726 aaKnown RBP18.34■□□□□ 0.53
SS18-226ENST00000585241 FCER1AP12319 257 aa18.34■□□□□ 0.53
SS18-226ENST00000585241 HSPA6P17066 643 aa18.34■□□□□ 0.53
SS18-226ENST00000585241 MCM7P33993 719 aa18.34■□□□□ 0.53
SS18-226ENST00000585241 PGM5Q15124 567 aa18.34■□□□□ 0.53
SS18-226ENST00000585241 PWP2Q15269 919 aaKnown RBP18.34■□□□□ 0.53
SS18-226ENST00000585241 NFKBIBQ15653 356 aa18.34■□□□□ 0.53
SS18-226ENST00000585241 Q4G0T1 1027 aa18.34■□□□□ 0.53
SS18-226ENST00000585241 PCNX4Q63HM2 1172 aa18.34■□□□□ 0.53
SS18-226ENST00000585241 ARL6IP4Q66PJ3 421 aaKnown RBP18.34■□□□□ 0.53
SS18-226ENST00000585241 NSUN6Q8TEA1 469 aaKnown RBP18.34■□□□□ 0.53
SS18-226ENST00000585241 LMBRD1Q9NUN5 540 aa18.34■□□□□ 0.53
SS18-226ENST00000585241 PLXNB2O15031 1838 aa18.34■□□□□ 0.53
SS18-226ENST00000585241 ASTN1O14525 1302 aa18.33■□□□□ 0.53
SS18-226ENST00000585241 IGLV3-22A0A075B6J6 115 aa18.33■□□□□ 0.52
SS18-226ENST00000585241 POTEB2H3BUK9 544 aa18.33■□□□□ 0.52
SS18-226ENST00000585241 NEMFO60524 1076 aa18.33■□□□□ 0.52
SS18-226ENST00000585241 PTPREP23469 700 aa18.33■□□□□ 0.52
SS18-226ENST00000585241 PRPHP41219 470 aa18.33■□□□□ 0.52
SS18-226ENST00000585241 PTGDRQ13258 359 aa18.33■□□□□ 0.52
SS18-226ENST00000585241 GRB14Q14449 540 aa18.33■□□□□ 0.52
SS18-226ENST00000585241 GPR142Q7Z601 462 aa18.33■□□□□ 0.52
SS18-226ENST00000585241 JMYQ8N9B5 988 aa18.33■□□□□ 0.52
SS18-226ENST00000585241 IL31RAQ8NI17 732 aa18.33■□□□□ 0.52
SS18-226ENST00000585241 LENG9Q96B70 501 aa18.33■□□□□ 0.52
SS18-226ENST00000585241 FGD4Q96M96 766 aa18.33■□□□□ 0.52
SS18-226ENST00000585241 PURBQ96QR8 312 aaKnown RBP18.33■□□□□ 0.52
SS18-226ENST00000585241 IWS1Q96ST2 819 aa18.33■□□□□ 0.52
SS18-226ENST00000585241 TMEM60Q9H2L4 133 aa18.33■□□□□ 0.52
SS18-226ENST00000585241 ADD3Q9UEY8 706 aaKnown RBP18.33■□□□□ 0.52
SS18-226ENST00000585241 SOWAHBA6NEL2 793 aa18.32■□□□□ 0.52
SS18-226ENST00000585241 FAM86B1E9PN63 330 aa18.32■□□□□ 0.52
SS18-226ENST00000585241 SLC37A4O43826 429 aa18.32■□□□□ 0.52
SS18-226ENST00000585241 FAM86B2P0C5J1 330 aa18.32■□□□□ 0.52
SS18-226ENST00000585241 PTMSP20962 102 aa18.32■□□□□ 0.52
SS18-226ENST00000585241 EDNRBP24530 442 aa18.32■□□□□ 0.52
SS18-226ENST00000585241 ALDH5A1P51649 535 aaPredicted RBP18.32■□□□□ 0.52
SS18-226ENST00000585241 C1QTNF8P60827 252 aa18.32■□□□□ 0.52
SS18-226ENST00000585241 ARHGEF16Q5VV41 709 aa18.32■□□□□ 0.52
SS18-226ENST00000585241 NIPA1Q7RTP0 329 aa18.32■□□□□ 0.52
SS18-226ENST00000585241 PLEKHH3Q7Z736 793 aa18.32■□□□□ 0.52
SS18-226ENST00000585241 MTMR9Q96QG7 549 aa18.32■□□□□ 0.52
SS18-226ENST00000585241 DDX25Q9UHL0 483 aaKnown RBP18.32■□□□□ 0.52
SS18-226ENST00000585241 FBXO2Q9UK22 296 aaPredicted RBP18.32■□□□□ 0.52
SS18-226ENST00000585241 UBIAD1Q9Y5Z9 338 aa18.32■□□□□ 0.52
SS18-226ENST00000585241 ZNFX1Q9P2E3 1918 aaKnown RBP18.31■□□□□ 0.52
SS18-226ENST00000585241 SLC15A5A6NIM6 579 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms