RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 SLC39A2Q9NP94 309 aa15.81■□□□□ 0.12
CDK5RAP3-237ENST00000585163 BLOC1S4Q9NUP1 217 aa15.81■□□□□ 0.12
CDK5RAP3-237ENST00000585163 SIK3Q9Y2K2 1263 aa15.81■□□□□ 0.12
CDK5RAP3-237ENST00000585163 DDX60LQ5H9U9 1706 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-237ENST00000585163 TNRC6CQ9HCJ0 1690 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-237ENST00000585163 PVALEFA0A1B0GWK0 134 aa15.8■□□□□ 0.12
CDK5RAP3-237ENST00000585163 GNPATO15228 680 aa15.8■□□□□ 0.12
CDK5RAP3-237ENST00000585163 ZNF185O15231 689 aa15.8■□□□□ 0.12
CDK5RAP3-237ENST00000585163 PHACTR2O75167 634 aa15.8■□□□□ 0.12
CDK5RAP3-237ENST00000585163 GRB10Q13322 594 aa15.8■□□□□ 0.12
CDK5RAP3-237ENST00000585163 VWA3BQ502W6 1294 aa15.8■□□□□ 0.12
CDK5RAP3-237ENST00000585163 LEKR1Q6ZMV7 388 aa15.8■□□□□ 0.12
CDK5RAP3-237ENST00000585163 FNBP4Q8N3X1 1017 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-237ENST00000585163 TRIM58Q8NG06 486 aa15.8■□□□□ 0.12
CDK5RAP3-237ENST00000585163 PIGSQ96S52 555 aa15.8■□□□□ 0.12
CDK5RAP3-237ENST00000585163 JADE2Q9NQC1 790 aa15.8■□□□□ 0.12
CDK5RAP3-237ENST00000585163 BIN2Q9UBW5 565 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-237ENST00000585163 STK17AQ9UEE5 414 aa15.8■□□□□ 0.12
CDK5RAP3-237ENST00000585163 LRWD1Q9UFC0 647 aa15.8■□□□□ 0.12
CDK5RAP3-237ENST00000585163 RPS6KA5O75582 802 aa15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 SYF2O95926 243 aaKnown RBP15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 PLEKP08567 350 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 TXKP42681 527 aa15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 BTDP43251 543 aa15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 GRAPQ13588 217 aa15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 NFIXQ14938 502 aa15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 UNC13DQ70J99 1090 aa15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 KRT26Q7Z3Y9 468 aa15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 GRAPLQ8TC17 118 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 CAGE1Q8TC20 777 aa15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 COG1Q8WTW3 980 aa15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 NDST4Q9H3R1 872 aa15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 ARHGAP20Q9P2F6 1191 aa15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 HPCAL4Q9UM19 191 aa15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 JRKLQ9Y4A0 524 aa15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 ABCB11O95342 1321 aa15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 MYMKA6NI61 221 aa15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 LCA5LO95447 670 aa15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 NOVP48745 357 aa15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 FXR2P51116 673 aaKnown RBP eCLIP15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 IQCEQ6IPM2 695 aa15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 C15orf52Q6ZUT6 534 aaKnown RBP15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 CEP95Q96GE4 821 aa15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 VAT1LQ9HCJ6 419 aa15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 ZC3H4Q9UPT8 1303 aaKnown RBP15.79■□□□□ 0.12
CDK5RAP3-237ENST00000585163 GPR75-ASB3A0A0A6YYF3 556 aa15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 KDM4FA0A1W2PPD8 638 aa15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 USO1O60763 962 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 CCDC96Q2M329 555 aa15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 PTF1AQ7RTS3 328 aa15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 CCDC84Q86UT8 332 aaPredicted RBP15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 GUF1Q8N442 669 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 LARP4BQ92615 738 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 PNMA5Q96PV4 448 aa15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 IFIH1Q9BYX4 1025 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 RIOX1Q9H6W3 641 aa15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 SH2D4AQ9H788 454 aa15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 SNX12Q9UMY4 172 aa15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 hCG_1984214I3L0E3 225 aa15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 EPHB6O15197 1021 aa15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 RNF40O75150 1001 aa15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 TNNT3P45378 269 aaPredicted RBP15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 CALCRLQ16602 461 aa15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 MAN2A1Q16706 1144 aa15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 CCNI2Q6ZMN8 369 aaPredicted RBP15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 C2CD5Q86YS7 1000 aa15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 CREG2Q8IUH2 290 aa15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 ZNF713Q8N859 430 aaPredicted RBP15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 FAM204AQ9H8W3 233 aa15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 TMEM260Q9NX78 707 aa15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 PCDHA13Q9Y5I0 950 aa15.78■□□□□ 0.12
CDK5RAP3-237ENST00000585163 TACC1O75410 805 aa15.77■□□□□ 0.12
CDK5RAP3-237ENST00000585163 PRPF6O94906 941 aaKnown RBP15.77■□□□□ 0.12
CDK5RAP3-237ENST00000585163 FGFR1OPO95684 399 aaKnown RBP15.77■□□□□ 0.12
CDK5RAP3-237ENST00000585163 IVLP07476 585 aa15.77■□□□□ 0.12
CDK5RAP3-237ENST00000585163 PRLRP16471 622 aa15.77■□□□□ 0.12
CDK5RAP3-237ENST00000585163 KIF11P52732 1056 aa15.77■□□□□ 0.12
CDK5RAP3-237ENST00000585163 ITIH3Q06033 890 aa15.77■□□□□ 0.12
CDK5RAP3-237ENST00000585163 ZNF572Q7Z3I7 529 aaPredicted RBP15.77■□□□□ 0.12
CDK5RAP3-237ENST00000585163 TEX11Q8IYF3 940 aa15.77■□□□□ 0.12
CDK5RAP3-237ENST00000585163 PLCD3Q8N3E9 789 aa15.77■□□□□ 0.12
CDK5RAP3-237ENST00000585163 ARHGEF1Q92888 912 aaKnown RBP15.77■□□□□ 0.12
CDK5RAP3-237ENST00000585163 TRERF1Q96PN7 1200 aa15.77■□□□□ 0.12
CDK5RAP3-237ENST00000585163 FAM207AQ9NSI2 230 aaPredicted RBP15.77■□□□□ 0.12
CDK5RAP3-237ENST00000585163 TMEM51Q9NW97 253 aa15.77■□□□□ 0.12
CDK5RAP3-237ENST00000585163 RTCBQ9Y3I0 505 aaKnown RBP15.77■□□□□ 0.12
CDK5RAP3-237ENST00000585163 CAPN6Q9Y6Q1 641 aa15.77■□□□□ 0.12
CDK5RAP3-237ENST00000585163 ZMYND10O75800 440 aa15.77■□□□□ 0.12
CDK5RAP3-237ENST00000585163 MYBL2P10244 700 aa15.77■□□□□ 0.12
CDK5RAP3-237ENST00000585163 LRRC63Q05C16 580 aa15.77■□□□□ 0.12
CDK5RAP3-237ENST00000585163 FAM98CQ17RN3 349 aaKnown RBP15.77■□□□□ 0.12
CDK5RAP3-237ENST00000585163 AMIGO3Q86WK7 504 aa15.77■□□□□ 0.12
CDK5RAP3-237ENST00000585163 SMCR8Q8TEV9 937 aaPredicted RBP15.77■□□□□ 0.12
CDK5RAP3-237ENST00000585163 TSPYL1Q9H0U9 437 aa15.77■□□□□ 0.12
CDK5RAP3-237ENST00000585163 USP17L5A8MUK1 530 aa15.76■□□□□ 0.11
CDK5RAP3-237ENST00000585163 PLCG2P16885 1265 aa15.76■□□□□ 0.11
CDK5RAP3-237ENST00000585163 HOXA7P31268 230 aaPredicted RBP15.76■□□□□ 0.11
CDK5RAP3-237ENST00000585163 PDIA5Q14554 519 aa15.76■□□□□ 0.11
CDK5RAP3-237ENST00000585163 TMEM266Q2M3C6 531 aa15.76■□□□□ 0.11
CDK5RAP3-237ENST00000585163 MMGT1Q8N4V1 131 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms