RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 VCAM1P19320 739 aa16.9■□□□□ 0.3
CDK5RAP3-236ENST00000584991 ERCC5P28715 1186 aaPredicted RBP16.9■□□□□ 0.3
CDK5RAP3-236ENST00000584991 ADCY7P51828 1080 aa16.9■□□□□ 0.3
CDK5RAP3-236ENST00000584991 HMGCS2P54868 508 aa16.9■□□□□ 0.3
CDK5RAP3-236ENST00000584991 POSTNQ15063 836 aa16.9■□□□□ 0.3
CDK5RAP3-236ENST00000584991 FBXO11Q86XK2 927 aa16.9■□□□□ 0.3
CDK5RAP3-236ENST00000584991 ZNF526Q8TF50 670 aaPredicted RBP16.9■□□□□ 0.3
CDK5RAP3-236ENST00000584991 AMNQ9BXJ7 453 aa16.9■□□□□ 0.3
CDK5RAP3-236ENST00000584991 SMCHD1A6NHR9 2005 aa16.89■□□□□ 0.3
CDK5RAP3-236ENST00000584991 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.89■□□□□ 0.29
CDK5RAP3-236ENST00000584991 C19orf81C9J6K1 198 aa16.89■□□□□ 0.29
CDK5RAP3-236ENST00000584991 TRAF5O00463 557 aa16.89■□□□□ 0.29
CDK5RAP3-236ENST00000584991 FMR1Q06787 632 aaKnown RBP eCLIP16.89■□□□□ 0.29
CDK5RAP3-236ENST00000584991 USH1GQ495M9 461 aa16.89■□□□□ 0.29
CDK5RAP3-236ENST00000584991 ANKRD13AQ8IZ07 590 aa16.89■□□□□ 0.29
CDK5RAP3-236ENST00000584991 SPATA20Q8TB22 786 aa16.89■□□□□ 0.29
CDK5RAP3-236ENST00000584991 CLMNQ96JQ2 1002 aa16.89■□□□□ 0.29
CDK5RAP3-236ENST00000584991 TANGO6Q9C0B7 1094 aa16.89■□□□□ 0.29
CDK5RAP3-236ENST00000584991 ELP3Q9H9T3 547 aa16.89■□□□□ 0.29
CDK5RAP3-236ENST00000584991 NMRK2Q9NPI5 230 aa16.89■□□□□ 0.29
CDK5RAP3-236ENST00000584991 TRMT1Q9NXH9 659 aaKnown RBP16.89■□□□□ 0.29
CDK5RAP3-236ENST00000584991 DDX41Q9UJV9 622 aaKnown RBP16.89■□□□□ 0.29
CDK5RAP3-236ENST00000584991 PCDHB6Q9Y5E3 794 aa16.89■□□□□ 0.29
CDK5RAP3-236ENST00000584991 CCDC194A0A1B0GVG4 234 aa16.88■□□□□ 0.29
CDK5RAP3-236ENST00000584991 ARHGAP6O43182 974 aa16.88■□□□□ 0.29
CDK5RAP3-236ENST00000584991 ETF1P62495 437 aaKnown RBP16.88■□□□□ 0.29
CDK5RAP3-236ENST00000584991 CCDC174Q6PII3 467 aa16.88■□□□□ 0.29
CDK5RAP3-236ENST00000584991 ARMC9Q7Z3E5 817 aa16.88■□□□□ 0.29
CDK5RAP3-236ENST00000584991 CNKSR2Q8WXI2 1034 aa16.88■□□□□ 0.29
CDK5RAP3-236ENST00000584991 CLIC6Q96NY7 704 aa16.88■□□□□ 0.29
CDK5RAP3-236ENST00000584991 RANBP17Q9H2T7 1088 aaKnown RBP16.88■□□□□ 0.29
CDK5RAP3-236ENST00000584991 RPAP3Q9H6T3 665 aaPredicted RBP16.88■□□□□ 0.29
CDK5RAP3-236ENST00000584991 BIN2Q9UBW5 565 aaPredicted RBP16.88■□□□□ 0.29
CDK5RAP3-236ENST00000584991 ZNF215Q9UL58 517 aaPredicted RBP16.88■□□□□ 0.29
CDK5RAP3-236ENST00000584991 TAL1P17542 331 aaPredicted RBP16.88■□□□□ 0.29
CDK5RAP3-236ENST00000584991 DMTNQ08495 405 aa16.88■□□□□ 0.29
CDK5RAP3-236ENST00000584991 MORC3Q14149 939 aa16.88■□□□□ 0.29
CDK5RAP3-236ENST00000584991 REXO1Q8N1G1 1221 aaKnown RBP16.88■□□□□ 0.29
CDK5RAP3-236ENST00000584991 SMARCE1Q969G3 411 aa16.88■□□□□ 0.29
CDK5RAP3-236ENST00000584991 SLF1Q9BQI6 1058 aa16.88■□□□□ 0.29
CDK5RAP3-236ENST00000584991 ZNF408Q9H9D4 720 aa16.88■□□□□ 0.29
CDK5RAP3-236ENST00000584991 RIC8AQ9NPQ8 531 aa16.88■□□□□ 0.29
CDK5RAP3-236ENST00000584991 PTPRFP10586 1907 aa16.87■□□□□ 0.29
CDK5RAP3-236ENST00000584991 WNT7AO00755 349 aa16.87■□□□□ 0.29
CDK5RAP3-236ENST00000584991 STX10O60499 249 aa16.87■□□□□ 0.29
CDK5RAP3-236ENST00000584991 TBX2Q13207 712 aaPredicted RBP16.87■□□□□ 0.29
CDK5RAP3-236ENST00000584991 JAKMIP3Q5VZ66 844 aa16.87■□□□□ 0.29
CDK5RAP3-236ENST00000584991 LDHDQ86WU2 507 aa16.87■□□□□ 0.29
CDK5RAP3-236ENST00000584991 PRPF38AQ8NAV1 312 aaKnown RBP16.87■□□□□ 0.29
CDK5RAP3-236ENST00000584991 CUL5Q93034 780 aa16.87■□□□□ 0.29
CDK5RAP3-236ENST00000584991 FERMT2Q96AC1 680 aa16.87■□□□□ 0.29
CDK5RAP3-236ENST00000584991 C12orf42Q96LP6 360 aa16.87■□□□□ 0.29
CDK5RAP3-236ENST00000584991 PYM1Q9BRP8 204 aaKnown RBP16.87■□□□□ 0.29
CDK5RAP3-236ENST00000584991 PSTPIP2Q9H939 334 aa16.87■□□□□ 0.29
CDK5RAP3-236ENST00000584991 TMEM260Q9NX78 707 aa16.87■□□□□ 0.29
CDK5RAP3-236ENST00000584991 PARP14Q460N5 1801 aa16.86■□□□□ 0.29
CDK5RAP3-236ENST00000584991 FLOT1O75955 427 aa16.86■□□□□ 0.29
CDK5RAP3-236ENST00000584991 ATP1A3P13637 1013 aa16.86■□□□□ 0.29
CDK5RAP3-236ENST00000584991 ZNF18P17022 549 aa16.86■□□□□ 0.29
CDK5RAP3-236ENST00000584991 ZSCAN20P17040 1043 aaPredicted RBP16.86■□□□□ 0.29
CDK5RAP3-236ENST00000584991 MRPL12P52815 198 aaKnown RBP16.86■□□□□ 0.29
CDK5RAP3-236ENST00000584991 FAM193AP78312 1265 aa16.86■□□□□ 0.29
CDK5RAP3-236ENST00000584991 UBE2SQ16763 222 aa16.86■□□□□ 0.29
CDK5RAP3-236ENST00000584991 TTC38Q5R3I4 469 aa16.86■□□□□ 0.29
CDK5RAP3-236ENST00000584991 KRT25Q7Z3Z0 450 aa16.86■□□□□ 0.29
CDK5RAP3-236ENST00000584991 FANCLQ9NW38 375 aa16.86■□□□□ 0.29
CDK5RAP3-236ENST00000584991 TMOD4Q9NZQ9 345 aa16.86■□□□□ 0.29
CDK5RAP3-236ENST00000584991 TPM1P09493 284 aa16.86■□□□□ 0.29
CDK5RAP3-236ENST00000584991 TRAPPC10P48553 1259 aa16.86■□□□□ 0.29
CDK5RAP3-236ENST00000584991 CBX1P83916 185 aa16.86■□□□□ 0.29
CDK5RAP3-236ENST00000584991 ZNF174Q15697 407 aa16.86■□□□□ 0.29
CDK5RAP3-236ENST00000584991 INF2Q27J81 1249 aa16.86■□□□□ 0.29
CDK5RAP3-236ENST00000584991 ERO1BQ86YB8 467 aa16.86■□□□□ 0.29
CDK5RAP3-236ENST00000584991 OTUD5Q96G74 571 aa16.86■□□□□ 0.29
CDK5RAP3-236ENST00000584991 MAN1B1Q9UKM7 699 aa16.86■□□□□ 0.29
CDK5RAP3-236ENST00000584991 POLR2DO15514 142 aaKnown RBP16.85■□□□□ 0.29
CDK5RAP3-236ENST00000584991 PPATQ06203 517 aa16.85■□□□□ 0.29
CDK5RAP3-236ENST00000584991 NONOQ15233 471 aaKnown RBP eCLIP16.85■□□□□ 0.29
CDK5RAP3-236ENST00000584991 SH3D19Q5HYK7 790 aa16.85■□□□□ 0.29
CDK5RAP3-236ENST00000584991 RBM46Q8TBY0 533 aaKnown RBP16.85■□□□□ 0.29
CDK5RAP3-236ENST00000584991 PPP1R9AQ9ULJ8 1098 aa16.85■□□□□ 0.29
CDK5RAP3-236ENST00000584991 CLK2P49760 499 aaKnown RBP16.84■□□□□ 0.29
CDK5RAP3-236ENST00000584991 GABPB1Q06547 395 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP3-236ENST00000584991 GLT8D2Q9H1C3 349 aa16.84■□□□□ 0.29
CDK5RAP3-236ENST00000584991 SPDYE5A6NIY4 337 aa16.84■□□□□ 0.29
CDK5RAP3-236ENST00000584991 USP17L15C9J2P7 530 aa16.84■□□□□ 0.29
CDK5RAP3-236ENST00000584991 USP17L13C9JLJ4 530 aa16.84■□□□□ 0.29
CDK5RAP3-236ENST00000584991 USP17L11C9JVI0 530 aa16.84■□□□□ 0.29
CDK5RAP3-236ENST00000584991 USP17L18D6R9N7 530 aa16.84■□□□□ 0.29
CDK5RAP3-236ENST00000584991 USP17L22D6RA61 530 aa16.84■□□□□ 0.29
CDK5RAP3-236ENST00000584991 USP17L17D6RBQ6 530 aa16.84■□□□□ 0.29
CDK5RAP3-236ENST00000584991 USP17L19D6RCP7 530 aa16.84■□□□□ 0.29
CDK5RAP3-236ENST00000584991 USP17L20D6RJB6 530 aa16.84■□□□□ 0.29
CDK5RAP3-236ENST00000584991 IRF6O14896 467 aa16.84■□□□□ 0.29
CDK5RAP3-236ENST00000584991 ACTN4O43707 911 aaKnown RBP16.84■□□□□ 0.29
CDK5RAP3-236ENST00000584991 BMP6P22004 513 aa16.84■□□□□ 0.29
CDK5RAP3-236ENST00000584991 USP17L24Q0WX57 530 aa16.84■□□□□ 0.29
CDK5RAP3-236ENST00000584991 TRAF1Q13077 416 aa16.84■□□□□ 0.29
CDK5RAP3-236ENST00000584991 LDLRAD1Q5T700 205 aa16.84■□□□□ 0.29
CDK5RAP3-236ENST00000584991 SPECC1LQ69YQ0 1117 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms