RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 MAFAQ8NHW3 353 aaPredicted RBP23.83■■□□□ 1.41
TOP3A-219ENST00000584887 SYTL5Q8TDW5 730 aaPredicted RBP23.83■■□□□ 1.41
TOP3A-219ENST00000584887 TAAR1Q96RJ0 339 aa23.83■■□□□ 1.41
TOP3A-219ENST00000584887 JMJD4Q9H9V9 463 aa23.83■■□□□ 1.41
TOP3A-219ENST00000584887 MRPL11Q9Y3B7 192 aaKnown RBP23.83■■□□□ 1.41
TOP3A-219ENST00000584887 MYH6P13533 1939 aa23.82■■□□□ 1.4
TOP3A-219ENST00000584887 TMEM265A0A087WTH1 108 aa23.82■■□□□ 1.4
TOP3A-219ENST00000584887 GRXCR1A8MXD5 290 aa23.82■■□□□ 1.4
TOP3A-219ENST00000584887 TTLL4Q14679 1199 aa23.82■■□□□ 1.4
TOP3A-219ENST00000584887 SEPT14Q6ZU15 432 aa23.82■■□□□ 1.4
TOP3A-219ENST00000584887 MCF2L2Q86YR7 1114 aa23.82■■□□□ 1.4
TOP3A-219ENST00000584887 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.82■■□□□ 1.4
TOP3A-219ENST00000584887 STAG2Q8N3U4 1231 aa23.82■■□□□ 1.4
TOP3A-219ENST00000584887 PPP1R13LQ8WUF5 828 aa23.82■■□□□ 1.4
TOP3A-219ENST00000584887 TIFAQ96CG3 184 aa23.82■■□□□ 1.4
TOP3A-219ENST00000584887 TRMT13Q9NUP7 481 aaKnown RBP23.82■■□□□ 1.4
TOP3A-219ENST00000584887 CYP2C9P11712 490 aa23.81■■□□□ 1.4
TOP3A-219ENST00000584887 PTH1RQ03431 593 aa23.81■■□□□ 1.4
TOP3A-219ENST00000584887 NSUN6Q8TEA1 469 aaKnown RBP23.81■■□□□ 1.4
TOP3A-219ENST00000584887 RMDN3Q96TC7 470 aa23.81■■□□□ 1.4
TOP3A-219ENST00000584887 MTIF3Q9H2K0 278 aaKnown RBP23.81■■□□□ 1.4
TOP3A-219ENST00000584887 COL20A1Q9P218 1284 aa23.81■■□□□ 1.4
TOP3A-219ENST00000584887 ARIH2O95376 493 aa23.8■■□□□ 1.4
TOP3A-219ENST00000584887 FGBP02675 491 aa23.8■■□□□ 1.4
TOP3A-219ENST00000584887 CHMLP26374 656 aa23.8■■□□□ 1.4
TOP3A-219ENST00000584887 PBX2P40425 430 aa23.8■■□□□ 1.4
TOP3A-219ENST00000584887 SEC23AQ15436 765 aa23.8■■□□□ 1.4
TOP3A-219ENST00000584887 WNT8AQ9H1J5 351 aa23.8■■□□□ 1.4
TOP3A-219ENST00000584887 U3KPZ7 1027 aaPredicted RBP23.8■■□□□ 1.4
TOP3A-219ENST00000584887 MYO9BQ13459 2157 aa23.79■■□□□ 1.4
TOP3A-219ENST00000584887 KLRF2D3W0D1 207 aa23.79■■□□□ 1.4
TOP3A-219ENST00000584887 CFBP00751 764 aa23.79■■□□□ 1.4
TOP3A-219ENST00000584887 SUPT20HL2P0C7V6 817 aa23.79■■□□□ 1.4
TOP3A-219ENST00000584887 EIF2AK2P19525 551 aaKnown RBP23.79■■□□□ 1.4
TOP3A-219ENST00000584887 GRIN2CQ14957 1233 aa23.79■■□□□ 1.4
TOP3A-219ENST00000584887 NBPF20Q3BBV1 942 aa23.79■■□□□ 1.4
TOP3A-219ENST00000584887 ARHGEF16Q5VV41 709 aa23.79■■□□□ 1.4
TOP3A-219ENST00000584887 OTOP2Q7RTS6 562 aa23.79■■□□□ 1.4
TOP3A-219ENST00000584887 RALYLQ86SE5 291 aaKnown RBP23.79■■□□□ 1.4
TOP3A-219ENST00000584887 HERVK_113Q902F9 699 aa23.79■■□□□ 1.4
TOP3A-219ENST00000584887 SCLYQ96I15 445 aa23.79■■□□□ 1.4
TOP3A-219ENST00000584887 AMNQ9BXJ7 453 aa23.79■■□□□ 1.4
TOP3A-219ENST00000584887 ZNF576Q9H609 170 aa23.79■■□□□ 1.4
TOP3A-219ENST00000584887 IFIT3O14879 490 aaKnown RBP23.78■■□□□ 1.4
TOP3A-219ENST00000584887 KPNA6O60684 536 aa23.78■■□□□ 1.4
TOP3A-219ENST00000584887 CYP21A2P08686 494 aa23.78■■□□□ 1.4
TOP3A-219ENST00000584887 RASIP1Q5U651 963 aa23.78■■□□□ 1.4
TOP3A-219ENST00000584887 CHST3Q7LGC8 479 aa23.78■■□□□ 1.4
TOP3A-219ENST00000584887 PBX4Q9BYU1 374 aa23.78■■□□□ 1.4
TOP3A-219ENST00000584887 CXXC1Q9P0U4 656 aaPredicted RBP23.78■■□□□ 1.4
TOP3A-219ENST00000584887 ERICH2A1L162 156 aa23.77■■□□□ 1.4
TOP3A-219ENST00000584887 A6NJR5 290 aa23.77■■□□□ 1.4
TOP3A-219ENST00000584887 STXBP2Q15833 593 aa23.77■■□□□ 1.4
TOP3A-219ENST00000584887 LY6KQ17RY6 165 aa23.77■■□□□ 1.4
TOP3A-219ENST00000584887 HOMER1Q86YM7 354 aa23.77■■□□□ 1.4
TOP3A-219ENST00000584887 AFG1LQ8WV93 481 aa23.77■■□□□ 1.4
TOP3A-219ENST00000584887 MAF1Q9H063 256 aa23.77■■□□□ 1.4
TOP3A-219ENST00000584887 SCN10AQ9Y5Y9 1956 aa23.76■■□□□ 1.39
TOP3A-219ENST00000584887 ZBBXA8MT70 800 aa23.76■■□□□ 1.39
TOP3A-219ENST00000584887 GH1P01241 217 aa23.76■■□□□ 1.39
TOP3A-219ENST00000584887 RPUSD2Q8IZ73 545 aaKnown RBP23.76■■□□□ 1.39
TOP3A-219ENST00000584887 IWS1Q96ST2 819 aa23.76■■□□□ 1.39
TOP3A-219ENST00000584887 MAD2L2Q9UI95 211 aa23.76■■□□□ 1.39
TOP3A-219ENST00000584887 MSRAQ9UJ68 235 aa23.76■■□□□ 1.39
TOP3A-219ENST00000584887 NOD1Q9Y239 953 aa23.76■■□□□ 1.39
TOP3A-219ENST00000584887 TAF6LQ9Y6J9 622 aa23.76■■□□□ 1.39
TOP3A-219ENST00000584887 ZBTB5O15062 677 aa23.75■■□□□ 1.39
TOP3A-219ENST00000584887 NFRKBQ6P4R8 1299 aa23.75■■□□□ 1.39
TOP3A-219ENST00000584887 CCDC62Q6P9F0 684 aa23.75■■□□□ 1.39
TOP3A-219ENST00000584887 DEFB128Q7Z7B8 93 aa23.75■■□□□ 1.39
TOP3A-219ENST00000584887 SENP2Q9HC62 589 aa23.75■■□□□ 1.39
TOP3A-219ENST00000584887 PCDHA1Q9Y5I3 950 aa23.75■■□□□ 1.39
TOP3A-219ENST00000584887 BAZ2BQ9UIF8 2168 aaKnown RBP23.74■■□□□ 1.39
TOP3A-219ENST00000584887 PALM3A6NDB9 673 aaPredicted RBP23.74■■□□□ 1.39
TOP3A-219ENST00000584887 SGSM2O43147 1006 aa23.74■■□□□ 1.39
TOP3A-219ENST00000584887 PPP1R11O60927 126 aaPredicted RBP23.74■■□□□ 1.39
TOP3A-219ENST00000584887 NR3C2P08235 984 aa23.74■■□□□ 1.39
TOP3A-219ENST00000584887 ARHGAP1Q07960 439 aa23.74■■□□□ 1.39
TOP3A-219ENST00000584887 GRM4Q14833 912 aa23.74■■□□□ 1.39
TOP3A-219ENST00000584887 WTAPQ15007 396 aa23.74■■□□□ 1.39
TOP3A-219ENST00000584887 SART3Q15020 963 aaKnown RBP23.74■■□□□ 1.39
TOP3A-219ENST00000584887 RAB30Q15771 203 aa23.74■■□□□ 1.39
TOP3A-219ENST00000584887 NCOA7Q8NI08 942 aa23.74■■□□□ 1.39
TOP3A-219ENST00000584887 PXMP2Q9NR77 195 aa23.74■■□□□ 1.39
TOP3A-219ENST00000584887 MRVI1Q9Y6F6 885 aa23.74■■□□□ 1.39
TOP3A-219ENST00000584887 E7EWF7 191 aa23.73■■□□□ 1.39
TOP3A-219ENST00000584887 OPLAHO14841 1288 aa23.73■■□□□ 1.39
TOP3A-219ENST00000584887 MMP3P08254 477 aa23.73■■□□□ 1.39
TOP3A-219ENST00000584887 MYCLP12524 364 aaPredicted RBP23.73■■□□□ 1.39
TOP3A-219ENST00000584887 HOXA13P31271 388 aaPredicted RBP23.73■■□□□ 1.39
TOP3A-219ENST00000584887 TMEM67Q5HYA8 995 aa23.73■■□□□ 1.39
TOP3A-219ENST00000584887 RETREG2Q8NC44 543 aa23.73■■□□□ 1.39
TOP3A-219ENST00000584887 PIGSQ96S52 555 aa23.73■■□□□ 1.39
TOP3A-219ENST00000584887 NKX2-4Q9H2Z4 354 aa23.73■■□□□ 1.39
TOP3A-219ENST00000584887 SLC4A7Q9Y6M7 1214 aa23.73■■□□□ 1.39
TOP3A-219ENST00000584887 EIF3JO75822 258 aaKnown RBP23.72■■□□□ 1.39
TOP3A-219ENST00000584887 HSD17B4P51659 736 aa23.72■■□□□ 1.39
TOP3A-219ENST00000584887 STOX1Q6ZVD7 989 aa23.72■■□□□ 1.39
TOP3A-219ENST00000584887 PIBF1Q8WXW3 757 aa23.72■■□□□ 1.39
TOP3A-219ENST00000584887 MTMR8Q96EF0 704 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms