RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 PXMP2Q9NR77 195 aa28.74■■■□□ 2.19
TTC39C-209ENST00000584250 SEC63Q9UGP8 760 aaKnown RBP28.74■■■□□ 2.19
TTC39C-209ENST00000584250 PHF24Q9UPV7 400 aa28.74■■■□□ 2.19
TTC39C-209ENST00000584250 C6orf222P0C671 652 aaPredicted RBP28.73■■■□□ 2.19
TTC39C-209ENST00000584250 GJA9P57773 515 aa28.73■■■□□ 2.19
TTC39C-209ENST00000584250 BEX3Q00994 111 aa28.73■■■□□ 2.19
TTC39C-209ENST00000584250 IQSEC1Q6DN90 963 aa28.73■■■□□ 2.19
TTC39C-209ENST00000584250 FCHSD1Q86WN1 690 aa28.73■■■□□ 2.19
TTC39C-209ENST00000584250 IL31RAQ8NI17 732 aa28.73■■■□□ 2.19
TTC39C-209ENST00000584250 TM6SF1Q9BZW5 370 aa28.73■■■□□ 2.19
TTC39C-209ENST00000584250 RBM28Q9NW13 759 aaKnown RBP28.73■■■□□ 2.19
TTC39C-209ENST00000584250 RBM47A0AV96 593 aaKnown RBP28.72■■■□□ 2.19
TTC39C-209ENST00000584250 GCOM1H8Y6P7 765 aaPredicted RBP28.72■■■□□ 2.19
TTC39C-209ENST00000584250 POLR2MP0CAP2 368 aa28.72■■■□□ 2.19
TTC39C-209ENST00000584250 KCNA10Q16322 511 aa28.72■■■□□ 2.19
TTC39C-209ENST00000584250 ARHGEF16Q5VV41 709 aa28.72■■■□□ 2.19
TTC39C-209ENST00000584250 ZFP91Q96JP5 570 aaPredicted RBP28.72■■■□□ 2.19
TTC39C-209ENST00000584250 CYP46A1Q9Y6A2 500 aa28.72■■■□□ 2.19
TTC39C-209ENST00000584250 DYNC1LI2O43237 492 aaPredicted RBP28.71■■■□□ 2.19
TTC39C-209ENST00000584250 ARIH2O95376 493 aa28.71■■■□□ 2.19
TTC39C-209ENST00000584250 METAP2P50579 478 aaKnown RBP eCLIP28.71■■■□□ 2.19
TTC39C-209ENST00000584250 TRAF1Q13077 416 aa28.71■■■□□ 2.19
TTC39C-209ENST00000584250 USP17L6PQ6QN14 398 aa28.71■■■□□ 2.19
TTC39C-209ENST00000584250 TLK2Q86UE8 772 aa28.71■■■□□ 2.19
TTC39C-209ENST00000584250 COPS5Q92905 334 aa28.71■■■□□ 2.19
TTC39C-209ENST00000584250 WDR11Q9BZH6 1224 aa28.71■■■□□ 2.19
TTC39C-209ENST00000584250 V9GY48 417 aaPredicted RBP28.71■■■□□ 2.19
TTC39C-209ENST00000584250 DNAH12Q6ZR08 3092 aa28.71■■■□□ 2.19
TTC39C-209ENST00000584250 A0A1W2PQ45 241 aaPredicted RBP28.7■■■□□ 2.18
TTC39C-209ENST00000584250 A0A1W2PQY0 241 aa28.7■■■□□ 2.18
TTC39C-209ENST00000584250 PPFIA3O75145 1194 aa28.7■■■□□ 2.18
TTC39C-209ENST00000584250 NR3C2P08235 984 aa28.7■■■□□ 2.18
TTC39C-209ENST00000584250 RCAN1P53805 252 aa28.7■■■□□ 2.18
TTC39C-209ENST00000584250 C8orf34Q49A92 452 aa28.7■■■□□ 2.18
TTC39C-209ENST00000584250 TYW1BQ6NUM6 668 aa28.7■■■□□ 2.18
TTC39C-209ENST00000584250 SLC39A5Q6ZMH5 540 aa28.7■■■□□ 2.18
TTC39C-209ENST00000584250 PDCD2LQ9BRP1 358 aa28.7■■■□□ 2.18
TTC39C-209ENST00000584250 ZMYND8Q9ULU4 1186 aaPredicted RBP28.7■■■□□ 2.18
TTC39C-209ENST00000584250 MEIS2O14770 477 aa28.69■■■□□ 2.18
TTC39C-209ENST00000584250 CST5P28325 142 aaPredicted RBP28.69■■■□□ 2.18
TTC39C-209ENST00000584250 PDIA3P30101 505 aaKnown RBP28.69■■■□□ 2.18
TTC39C-209ENST00000584250 ACLYP53396 1101 aa28.69■■■□□ 2.18
TTC39C-209ENST00000584250 EVCP57679 992 aa28.69■■■□□ 2.18
TTC39C-209ENST00000584250 DUSP28Q4G0W2 176 aa28.69■■■□□ 2.18
TTC39C-209ENST00000584250 GNASQ5JWF2 1037 aa28.69■■■□□ 2.18
TTC39C-209ENST00000584250 WWC2Q6AWC2 1192 aa28.69■■■□□ 2.18
TTC39C-209ENST00000584250 HEATR3Q7Z4Q2 680 aa28.69■■■□□ 2.18
TTC39C-209ENST00000584250 NCOA5Q9HCD5 579 aaKnown RBP28.69■■■□□ 2.18
TTC39C-209ENST00000584250 MAP3K20Q9NYL2 800 aaKnown RBP28.69■■■□□ 2.18
TTC39C-209ENST00000584250 NID2Q14112 1375 aa28.68■■■□□ 2.18
TTC39C-209ENST00000584250 SYN1P17600 705 aa28.68■■■□□ 2.18
TTC39C-209ENST00000584250 RTP1P59025 263 aa28.68■■■□□ 2.18
TTC39C-209ENST00000584250 NKX3-2P78367 333 aa28.68■■■□□ 2.18
TTC39C-209ENST00000584250 CCT2P78371 535 aaKnown RBP28.68■■■□□ 2.18
TTC39C-209ENST00000584250 SEPT14Q6ZU15 432 aa28.68■■■□□ 2.18
TTC39C-209ENST00000584250 IWS1Q96ST2 819 aa28.68■■■□□ 2.18
TTC39C-209ENST00000584250 NR2E3Q9Y5X4 410 aa28.68■■■□□ 2.18
TTC39C-209ENST00000584250 KIAA1217Q5T5P2 1943 aa28.68■■■□□ 2.18
TTC39C-209ENST00000584250 ASGR1P07306 291 aa28.67■■■□□ 2.18
TTC39C-209ENST00000584250 MYCLP12524 364 aaPredicted RBP28.67■■■□□ 2.18
TTC39C-209ENST00000584250 PGM5Q15124 567 aa28.67■■■□□ 2.18
TTC39C-209ENST00000584250 SAMD3Q8N6K7 520 aa28.67■■■□□ 2.18
TTC39C-209ENST00000584250 MPHOSPH6Q99547 160 aaKnown RBP28.67■■■□□ 2.18
TTC39C-209ENST00000584250 TSEN34Q9BSV6 310 aaKnown RBP28.67■■■□□ 2.18
TTC39C-209ENST00000584250 PDRG1Q9NUG6 133 aa28.67■■■□□ 2.18
TTC39C-209ENST00000584250 RGS20O76081 388 aa28.66■■■□□ 2.18
TTC39C-209ENST00000584250 STXBP2Q15833 593 aa28.66■■■□□ 2.18
TTC39C-209ENST00000584250 NTRK3Q16288 839 aa28.66■■■□□ 2.18
TTC39C-209ENST00000584250 UBE2SQ16763 222 aa28.66■■■□□ 2.18
TTC39C-209ENST00000584250 TRIM60Q495X7 471 aa28.66■■■□□ 2.18
TTC39C-209ENST00000584250 CCDC62Q6P9F0 684 aa28.66■■■□□ 2.18
TTC39C-209ENST00000584250 SCFD2Q8WU76 684 aa28.66■■■□□ 2.18
TTC39C-209ENST00000584250 SPC25Q9HBM1 224 aa28.66■■■□□ 2.18
TTC39C-209ENST00000584250 ATP11BQ9Y2G3 1177 aa28.66■■■□□ 2.18
TTC39C-209ENST00000584250 B4DLN1 442 aa28.65■■■□□ 2.18
TTC39C-209ENST00000584250 TXNP10599 105 aaKnown RBP28.65■■■□□ 2.18
TTC39C-209ENST00000584250 MRPL12P52815 198 aaKnown RBP28.65■■■□□ 2.18
TTC39C-209ENST00000584250 SNX17Q15036 470 aa28.65■■■□□ 2.18
TTC39C-209ENST00000584250 FSCN1Q16658 493 aaKnown RBP28.65■■■□□ 2.18
TTC39C-209ENST00000584250 PHKBQ93100 1093 aa28.65■■■□□ 2.18
TTC39C-209ENST00000584250 AP5M1Q9H0R1 490 aa28.65■■■□□ 2.18
TTC39C-209ENST00000584250 PPP2R5BQ15173 497 aa28.64■■■□□ 2.18
TTC39C-209ENST00000584250 LY6KQ17RY6 165 aa28.64■■■□□ 2.18
TTC39C-209ENST00000584250 VSIG10LQ86VR7 867 aa28.64■■■□□ 2.18
TTC39C-209ENST00000584250 SMARCC2Q8TAQ2 1214 aa28.64■■■□□ 2.18
TTC39C-209ENST00000584250 PSTPIP2Q9H939 334 aa28.64■■■□□ 2.18
TTC39C-209ENST00000584250 Q9Y3F1 56 aa28.64■■■□□ 2.18
TTC39C-209ENST00000584250 MOXD2PA6NHM9 499 aa28.63■■■□□ 2.17
TTC39C-209ENST00000584250 STXBP3O00186 592 aa28.63■■■□□ 2.17
TTC39C-209ENST00000584250 PIK3CDO00329 1044 aa28.63■■■□□ 2.17
TTC39C-209ENST00000584250 ANAPC15P60006 121 aa28.63■■■□□ 2.17
TTC39C-209ENST00000584250 CXCL17Q6UXB2 119 aa28.63■■■□□ 2.17
TTC39C-209ENST00000584250 IL17RAQ96F46 866 aa28.63■■■□□ 2.17
TTC39C-209ENST00000584250 FRMPD4Q14CM0 1322 aa28.63■■■□□ 2.17
TTC39C-209ENST00000584250 ADAMTS3O15072 1205 aa28.62■■■□□ 2.17
TTC39C-209ENST00000584250 DTNBO60941 627 aa28.62■■■□□ 2.17
TTC39C-209ENST00000584250 EIF3JO75822 258 aaKnown RBP28.62■■■□□ 2.17
TTC39C-209ENST00000584250 MRPS9P82933 396 aaKnown RBP28.62■■■□□ 2.17
TTC39C-209ENST00000584250 STK3Q13188 491 aa28.62■■■□□ 2.17
TTC39C-209ENST00000584250 PKN1Q16512 942 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms