RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 TYW1BQ6NUM6 668 aa9.58□□□□□ -0.88
ERBB2-216ENST00000584014 TNS4Q8IZW8 715 aa9.58□□□□□ -0.88
ERBB2-216ENST00000584014 SLAIN1Q8ND83 568 aa9.58□□□□□ -0.88
ERBB2-216ENST00000584014 CCDC148Q8NFR7 591 aa9.58□□□□□ -0.88
ERBB2-216ENST00000584014 SYTL5Q8TDW5 730 aaPredicted RBP9.58□□□□□ -0.88
ERBB2-216ENST00000584014 TRIB2Q92519 343 aa9.58□□□□□ -0.88
ERBB2-216ENST00000584014 MPHOSPH6Q99547 160 aaKnown RBP9.58□□□□□ -0.88
ERBB2-216ENST00000584014 COL20A1Q9P218 1284 aa9.58□□□□□ -0.88
ERBB2-216ENST00000584014 ZHX1Q9UKY1 873 aaPredicted RBP9.58□□□□□ -0.88
ERBB2-216ENST00000584014 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.58□□□□□ -0.88
ERBB2-216ENST00000584014 DNAJC25-GNG10A0A024R161 153 aa9.57□□□□□ -0.88
ERBB2-216ENST00000584014 B4DLN1 442 aa9.57□□□□□ -0.88
ERBB2-216ENST00000584014 OPLAHO14841 1288 aa9.57□□□□□ -0.88
ERBB2-216ENST00000584014 HMGCRP04035 888 aa9.57□□□□□ -0.88
ERBB2-216ENST00000584014 PRKAR2AP13861 404 aaKnown RBP9.57□□□□□ -0.88
ERBB2-216ENST00000584014 FDPSP14324 419 aaKnown RBP9.57□□□□□ -0.88
ERBB2-216ENST00000584014 GJB2P29033 226 aa9.57□□□□□ -0.88
ERBB2-216ENST00000584014 GNA11P29992 359 aa9.57□□□□□ -0.88
ERBB2-216ENST00000584014 ALDH5A1P51649 535 aaPredicted RBP9.57□□□□□ -0.88
ERBB2-216ENST00000584014 IRF5Q13568 498 aa9.57□□□□□ -0.88
ERBB2-216ENST00000584014 SEPT14Q6ZU15 432 aa9.57□□□□□ -0.88
ERBB2-216ENST00000584014 TRMT44Q8IYL2 757 aaKnown RBP9.57□□□□□ -0.88
ERBB2-216ENST00000584014 FAM133AQ8N9E0 248 aa9.57□□□□□ -0.88
ERBB2-216ENST00000584014 SPDYE1Q8NFV5 336 aaPredicted RBP9.57□□□□□ -0.88
ERBB2-216ENST00000584014 RASGRP4Q8TDF6 673 aa9.57□□□□□ -0.88
ERBB2-216ENST00000584014 NSUN6Q8TEA1 469 aaKnown RBP9.57□□□□□ -0.88
ERBB2-216ENST00000584014 USP6NLQ92738 828 aa9.57□□□□□ -0.88
ERBB2-216ENST00000584014 C8orf76Q96K31 380 aa9.57□□□□□ -0.88
ERBB2-216ENST00000584014 LLPHQ9BRT6 129 aaKnown RBP9.57□□□□□ -0.88
ERBB2-216ENST00000584014 TINF2Q9BSI4 451 aa9.57□□□□□ -0.88
ERBB2-216ENST00000584014 RIC8AQ9NPQ8 531 aa9.57□□□□□ -0.88
ERBB2-216ENST00000584014 RTEL1Q9NZ71 1219 aa9.57□□□□□ -0.88
ERBB2-216ENST00000584014 CNPY2Q9Y2B0 182 aa9.57□□□□□ -0.88
ERBB2-216ENST00000584014 STK36Q9NRP7 1315 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 MCM3APO60318 1980 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 ASB14A6NK59 587 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 CCDC85CA6NKD9 419 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 H3BQV1 296 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 hCG_1984214I3L0E3 225 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 MEIS2O14770 477 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 ADAMTS3O15072 1205 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 SORBS3O60504 671 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 HOXC6P09630 235 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 XRCC5P13010 732 aaKnown RBP9.56□□□□□ -0.88
ERBB2-216ENST00000584014 CCND3P30281 292 aaPredicted RBP9.56□□□□□ -0.88
ERBB2-216ENST00000584014 ZNF76P36508 570 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 HSD17B4P51659 736 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 HMGN5P82970 282 aaKnown RBP9.56□□□□□ -0.88
ERBB2-216ENST00000584014 CACNB2Q08289 660 aaPredicted RBP9.56□□□□□ -0.88
ERBB2-216ENST00000584014 MTFR1Q15390 333 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 MCTP1Q6DN14 999 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 PPP1R18Q6NYC8 613 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 ARMCX2Q7L311 632 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 FBXO16Q8IX29 292 aaPredicted RBP9.56□□□□□ -0.88
ERBB2-216ENST00000584014 REXO1Q8N1G1 1221 aaKnown RBP9.56□□□□□ -0.88
ERBB2-216ENST00000584014 ZNF713Q8N859 430 aaPredicted RBP9.56□□□□□ -0.88
ERBB2-216ENST00000584014 RGS22Q8NE09 1264 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 IL27Q8NEV9 243 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 BICD2Q8TD16 824 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 UIMC1Q96RL1 719 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 RNF208Q9H0X6 261 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 EHMT1Q9H9B1 1298 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 BRMS1Q9HCU9 246 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 HMX1Q9NP08 348 aaPredicted RBP9.56□□□□□ -0.88
ERBB2-216ENST00000584014 PXMP2Q9NR77 195 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.56□□□□□ -0.88
ERBB2-216ENST00000584014 PCDHA6Q9UN73 950 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 KIF3AQ9Y496 699 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 PCDHA8Q9Y5H6 950 aa9.56□□□□□ -0.88
ERBB2-216ENST00000584014 NR3C2P08235 984 aa9.55□□□□□ -0.88
ERBB2-216ENST00000584014 CCL5P13501 91 aa9.55□□□□□ -0.88
ERBB2-216ENST00000584014 CCND2P30279 289 aa9.55□□□□□ -0.88
ERBB2-216ENST00000584014 KRT2P35908 639 aa9.55□□□□□ -0.88
ERBB2-216ENST00000584014 BECN1Q14457 450 aa9.55□□□□□ -0.88
ERBB2-216ENST00000584014 SAFBQ15424 915 aaKnown RBP eCLIP9.55□□□□□ -0.88
ERBB2-216ENST00000584014 STXBP2Q15833 593 aa9.55□□□□□ -0.88
ERBB2-216ENST00000584014 OLFML2BQ68BL8 750 aa9.55□□□□□ -0.88
ERBB2-216ENST00000584014 KRT40Q6A162 431 aa9.55□□□□□ -0.88
ERBB2-216ENST00000584014 BLIDQ8IZY5 108 aa9.55□□□□□ -0.88
ERBB2-216ENST00000584014 PXYLP1Q8TE99 480 aa9.55□□□□□ -0.88
ERBB2-216ENST00000584014 SNX21Q969T3 373 aa9.55□□□□□ -0.88
ERBB2-216ENST00000584014 FGD4Q96M96 766 aa9.55□□□□□ -0.88
ERBB2-216ENST00000584014 TMEM106CQ9BVX2 250 aa9.55□□□□□ -0.88
ERBB2-216ENST00000584014 ZMYND12Q9H0C1 365 aa9.55□□□□□ -0.88
ERBB2-216ENST00000584014 GLT8D2Q9H1C3 349 aa9.55□□□□□ -0.88
ERBB2-216ENST00000584014 UNC93B1Q9H1C4 597 aa9.55□□□□□ -0.88
ERBB2-216ENST00000584014 SH3GLB2Q9NR46 395 aa9.55□□□□□ -0.88
ERBB2-216ENST00000584014 PKD2L1Q9P0L9 805 aa9.55□□□□□ -0.88
ERBB2-216ENST00000584014 PCDHA4Q9UN74 947 aa9.55□□□□□ -0.88
ERBB2-216ENST00000584014 DIS3Q9Y2L1 958 aaKnown RBP9.55□□□□□ -0.88
ERBB2-216ENST00000584014 ASTN1O14525 1302 aa9.55□□□□□ -0.88
ERBB2-216ENST00000584014 ZNF236Q9UL36 1845 aa9.54□□□□□ -0.88
ERBB2-216ENST00000584014 CCDC194A0A1B0GVG4 234 aa9.54□□□□□ -0.88
ERBB2-216ENST00000584014 VPS37CA5D8V6 355 aaPredicted RBP9.54□□□□□ -0.88
ERBB2-216ENST00000584014 SNAI1O95863 264 aaPredicted RBP9.54□□□□□ -0.88
ERBB2-216ENST00000584014 ATP2B1P20020 1258 aa9.54□□□□□ -0.88
ERBB2-216ENST00000584014 ACVR2BQ13705 512 aa9.54□□□□□ -0.88
ERBB2-216ENST00000584014 PGM5Q15124 567 aa9.54□□□□□ -0.88
ERBB2-216ENST00000584014 LARP1BQ659C4 914 aaKnown RBP9.54□□□□□ -0.88
ERBB2-216ENST00000584014 ZNF467Q7Z7K2 595 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms