RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 DEFB115Q30KQ5 88 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 TTC38Q5R3I4 469 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 ADALQ6DHV7 355 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 NIPA1Q7RTP0 329 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 IFNL1Q8IU54 200 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 LINC00301Q8NCQ3 95 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 LEO1Q8WVC0 666 aaPredicted RBP10.48□□□□□ -0.73
CASC3-209ENST00000583902 CLEC4DQ8WXI8 215 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 SHISA4Q96DD7 197 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 AGBL1Q96MI9 1066 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 IWS1Q96ST2 819 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 ANO3Q9BYT9 981 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 RAB34Q9BZG1 259 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 ZFYVE28Q9HCC9 887 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 RAVER2Q9HCJ3 691 aaKnown RBP10.48□□□□□ -0.73
CASC3-209ENST00000583902 GJB4Q9NTQ9 266 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 RNF146Q9NTX7 359 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 SLC5A4Q9NY91 659 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 FRMPD4Q14CM0 1322 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 FAM155AB1AL88 458 aaPredicted RBP10.47□□□□□ -0.73
CASC3-209ENST00000583902 CFBP00751 764 aa10.47□□□□□ -0.73
CASC3-209ENST00000583902 BCRP11274 1271 aa10.47□□□□□ -0.73
CASC3-209ENST00000583902 MAPK4P31152 587 aa10.47□□□□□ -0.73
CASC3-209ENST00000583902 FOSBP53539 338 aa10.47□□□□□ -0.73
CASC3-209ENST00000583902 ATN1P54259 1190 aaPredicted RBP10.47□□□□□ -0.73
CASC3-209ENST00000583902 ERVK-9P63128 1117 aa10.47□□□□□ -0.73
CASC3-209ENST00000583902 ERVK-24P63145 666 aa10.47□□□□□ -0.73
CASC3-209ENST00000583902 ATP2C1P98194 919 aaPredicted RBP10.47□□□□□ -0.73
CASC3-209ENST00000583902 IRF5Q13568 498 aa10.47□□□□□ -0.73
CASC3-209ENST00000583902 ZNF467Q7Z7K2 595 aaPredicted RBP10.47□□□□□ -0.73
CASC3-209ENST00000583902 SLFN12Q8IYM2 578 aa10.47□□□□□ -0.73
CASC3-209ENST00000583902 KCTD17Q8N5Z5 321 aa10.47□□□□□ -0.73
CASC3-209ENST00000583902 OXER1Q8TDS5 423 aa10.47□□□□□ -0.73
CASC3-209ENST00000583902 NSUN6Q8TEA1 469 aaKnown RBP10.47□□□□□ -0.73
CASC3-209ENST00000583902 TBCKQ8TEA7 893 aa10.47□□□□□ -0.73
CASC3-209ENST00000583902 CRYGNQ8WXF5 182 aa10.47□□□□□ -0.73
CASC3-209ENST00000583902 SYAP1Q96A49 352 aaPredicted RBP10.47□□□□□ -0.73
CASC3-209ENST00000583902 CCDC34Q96HJ3 373 aa10.47□□□□□ -0.73
CASC3-209ENST00000583902 FAM20AQ96MK3 541 aa10.47□□□□□ -0.73
CASC3-209ENST00000583902 MBOAT7Q96N66 472 aa10.47□□□□□ -0.73
CASC3-209ENST00000583902 USP28Q96RU2 1077 aa10.47□□□□□ -0.73
CASC3-209ENST00000583902 CFHR5Q9BXR6 569 aa10.47□□□□□ -0.73
CASC3-209ENST00000583902 BIN2Q9UBW5 565 aaPredicted RBP10.47□□□□□ -0.73
CASC3-209ENST00000583902 METRNQ9UJH8 293 aa10.47□□□□□ -0.73
CASC3-209ENST00000583902 OPLAHO14841 1288 aa10.46□□□□□ -0.73
CASC3-209ENST00000583902 FIBPO43427 364 aa10.46□□□□□ -0.73
CASC3-209ENST00000583902 CUTAO60888 179 aa10.46□□□□□ -0.73
CASC3-209ENST00000583902 TOB1P50616 345 aaPredicted RBP10.46□□□□□ -0.73
CASC3-209ENST00000583902 ARHGAP4P98171 946 aa10.46□□□□□ -0.73
CASC3-209ENST00000583902 PLS1Q14651 629 aa10.46□□□□□ -0.73
CASC3-209ENST00000583902 PTPAQ15257 358 aa10.46□□□□□ -0.73
CASC3-209ENST00000583902 NFKBIBQ15653 356 aa10.46□□□□□ -0.73
CASC3-209ENST00000583902 INF2Q27J81 1249 aa10.46□□□□□ -0.73
CASC3-209ENST00000583902 Q4G0T1 1027 aa10.46□□□□□ -0.73
CASC3-209ENST00000583902 FOXD4L5Q5VV16 416 aaPredicted RBP10.46□□□□□ -0.73
CASC3-209ENST00000583902 JAKMIP3Q5VZ66 844 aa10.46□□□□□ -0.73
CASC3-209ENST00000583902 PCNX4Q63HM2 1172 aa10.46□□□□□ -0.73
CASC3-209ENST00000583902 USP17L6PQ6QN14 398 aa10.46□□□□□ -0.73
CASC3-209ENST00000583902 CCAR1Q8IX12 1150 aaKnown RBP10.46□□□□□ -0.73
CASC3-209ENST00000583902 MSL3Q8N5Y2 521 aaKnown RBP10.46□□□□□ -0.73
CASC3-209ENST00000583902 KRI1Q8N9T8 703 aaKnown RBP10.46□□□□□ -0.73
CASC3-209ENST00000583902 FOXD4L4Q8WXT5 416 aaPredicted RBP10.46□□□□□ -0.73
CASC3-209ENST00000583902 CDHR1Q96JP9 859 aa10.46□□□□□ -0.73
CASC3-209ENST00000583902 AK8Q96MA6 479 aa10.46□□□□□ -0.73
CASC3-209ENST00000583902 RBPJLQ9UBG7 517 aa10.46□□□□□ -0.73
CASC3-209ENST00000583902 CNPY2Q9Y2B0 182 aa10.46□□□□□ -0.73
CASC3-209ENST00000583902 DIS3Q9Y2L1 958 aaKnown RBP10.46□□□□□ -0.73
CASC3-209ENST00000583902 SRPRBQ9Y5M8 271 aaKnown RBP10.46□□□□□ -0.73
CASC3-209ENST00000583902 RPTORQ8N122 1335 aa10.46□□□□□ -0.73
CASC3-209ENST00000583902 ZNFX1Q9P2E3 1918 aaKnown RBP10.46□□□□□ -0.74
CASC3-209ENST00000583902 TTLL13PA6NNM8 815 aa10.45□□□□□ -0.74
CASC3-209ENST00000583902 CA12O43570 354 aa10.45□□□□□ -0.74
CASC3-209ENST00000583902 NEMFO60524 1076 aa10.45□□□□□ -0.74
CASC3-209ENST00000583902 TLR2O60603 784 aa10.45□□□□□ -0.74
CASC3-209ENST00000583902 FCER1AP12319 257 aa10.45□□□□□ -0.74
CASC3-209ENST00000583902 PTPREP23469 700 aa10.45□□□□□ -0.74
CASC3-209ENST00000583902 LONP1P36776 959 aaKnown RBP10.45□□□□□ -0.74
CASC3-209ENST00000583902 ME1P48163 572 aa10.45□□□□□ -0.74
CASC3-209ENST00000583902 RPS6P62753 249 aaKnown RBP10.45□□□□□ -0.74
CASC3-209ENST00000583902 DGKZQ13574 1117 aa10.45□□□□□ -0.74
CASC3-209ENST00000583902 PDIA5Q14554 519 aa10.45□□□□□ -0.74
CASC3-209ENST00000583902 KCTD2Q14681 263 aa10.45□□□□□ -0.74
CASC3-209ENST00000583902 TAF1CQ15572 869 aaPredicted RBP10.45□□□□□ -0.74
CASC3-209ENST00000583902 TMEM266Q2M3C6 531 aa10.45□□□□□ -0.74
CASC3-209ENST00000583902 KCNV1Q6PIU1 500 aa10.45□□□□□ -0.74
CASC3-209ENST00000583902 ANKRD35Q8N283 1001 aa10.45□□□□□ -0.74
CASC3-209ENST00000583902 FAM43AQ8N2R8 423 aa10.45□□□□□ -0.74
CASC3-209ENST00000583902 SYTL5Q8TDW5 730 aaPredicted RBP10.45□□□□□ -0.74
CASC3-209ENST00000583902 MOV10L1Q9BXT6 1211 aaKnown RBP10.45□□□□□ -0.74
CASC3-209ENST00000583902 LMBRD1Q9NUN5 540 aa10.45□□□□□ -0.74
CASC3-209ENST00000583902 CYP39A1Q9NYL5 469 aa10.45□□□□□ -0.74
CASC3-209ENST00000583902 BTBD7Q9P203 1132 aa10.45□□□□□ -0.74
CASC3-209ENST00000583902 USP25Q9UHP3 1055 aa10.45□□□□□ -0.74
CASC3-209ENST00000583902 IVNS1ABPQ9Y6Y0 642 aa10.45□□□□□ -0.74
CASC3-209ENST00000583902 ZNF236Q9UL36 1845 aa10.44□□□□□ -0.74
CASC3-209ENST00000583902 ASB14A6NK59 587 aa10.44□□□□□ -0.74
CASC3-209ENST00000583902 NFIBO00712 420 aa10.44□□□□□ -0.74
CASC3-209ENST00000583902 CCNT1O60563 726 aaKnown RBP10.44□□□□□ -0.74
CASC3-209ENST00000583902 PRPF40AO75400 957 aaKnown RBP10.44□□□□□ -0.74
CASC3-209ENST00000583902 CNMDO75829 334 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms