RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 SREBF1P36956 1147 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 TRAPPC10P48553 1259 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 ALDH5A1P51649 535 aaPredicted RBP10.65□□□□□ -0.7
UBBP4-201ENST00000583708 UBXN2AP68543 259 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 ORC2Q13416 577 aaPredicted RBP10.65□□□□□ -0.7
UBBP4-201ENST00000583708 IFFO2Q5TF58 517 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 PCNX4Q63HM2 1172 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 KRT40Q6A162 431 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 TYW1BQ6NUM6 668 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 MOXD1Q6UVY6 613 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 NIPA1Q7RTP0 329 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 VSIG10LQ86VR7 867 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 ARHGAP39Q9C0H5 1083 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 VTA1Q9NP79 307 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 PXMP2Q9NR77 195 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 VPS54Q9P1Q0 977 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 TSKSQ9UJT2 592 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 PCDHA6Q9UN73 950 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 CNPY2Q9Y2B0 182 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 PCDHA8Q9Y5H6 950 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 RPTORQ8N122 1335 aa10.64□□□□□ -0.71
UBBP4-201ENST00000583708 COL11A1P12107 1806 aaPredicted RBP10.64□□□□□ -0.71
UBBP4-201ENST00000583708 CCDC194A0A1B0GVG4 234 aa10.64□□□□□ -0.71
UBBP4-201ENST00000583708 SOWAHBA6NEL2 793 aa10.64□□□□□ -0.71
UBBP4-201ENST00000583708 M0R2N6 131 aa10.64□□□□□ -0.71
UBBP4-201ENST00000583708 MSCO60682 206 aa10.64□□□□□ -0.71
UBBP4-201ENST00000583708 NR3C2P08235 984 aa10.64□□□□□ -0.71
UBBP4-201ENST00000583708 GCFC2P16383 781 aaKnown RBP10.64□□□□□ -0.71
UBBP4-201ENST00000583708 CYP2B6P20813 491 aa10.64□□□□□ -0.71
UBBP4-201ENST00000583708 U2AF2P26368 475 aaKnown RBP eCLIP10.64□□□□□ -0.71
UBBP4-201ENST00000583708 PDE4DQ08499 809 aa10.64□□□□□ -0.71
UBBP4-201ENST00000583708 GNPTABQ3T906 1256 aa10.64□□□□□ -0.71
UBBP4-201ENST00000583708 IQSEC1Q6DN90 963 aa10.64□□□□□ -0.71
UBBP4-201ENST00000583708 USP17L6PQ6QN14 398 aa10.64□□□□□ -0.71
UBBP4-201ENST00000583708 GIMAP8Q8ND71 665 aaPredicted RBP10.64□□□□□ -0.71
UBBP4-201ENST00000583708 TBC1D5Q92609 795 aa10.64□□□□□ -0.71
UBBP4-201ENST00000583708 TAAR1Q96RJ0 339 aa10.64□□□□□ -0.71
UBBP4-201ENST00000583708 PDCD2LQ9BRP1 358 aa10.64□□□□□ -0.71
UBBP4-201ENST00000583708 ZSCAN16Q9H4T2 348 aaPredicted RBP10.64□□□□□ -0.71
UBBP4-201ENST00000583708 GABRQQ9UN88 632 aa10.64□□□□□ -0.71
UBBP4-201ENST00000583708 Q9Y3F1 56 aa10.64□□□□□ -0.71
UBBP4-201ENST00000583708 MYH6P13533 1939 aa10.63□□□□□ -0.71
UBBP4-201ENST00000583708 CYP3A7-CYP3A51PA0A087WV96 503 aa10.63□□□□□ -0.71
UBBP4-201ENST00000583708 RBM47A0AV96 593 aaKnown RBP10.63□□□□□ -0.71
UBBP4-201ENST00000583708 NKRFO15226 690 aaKnown RBP eCLIP10.63□□□□□ -0.71
UBBP4-201ENST00000583708 PGK2P07205 417 aa10.63□□□□□ -0.71
UBBP4-201ENST00000583708 CYP3A7P24462 503 aa10.63□□□□□ -0.71
UBBP4-201ENST00000583708 HOXA13P31271 388 aaPredicted RBP10.63□□□□□ -0.71
UBBP4-201ENST00000583708 CIITAP33076 1130 aa10.63□□□□□ -0.71
UBBP4-201ENST00000583708 CNTN2Q02246 1040 aa10.63□□□□□ -0.71
UBBP4-201ENST00000583708 NONOQ15233 471 aaKnown RBP eCLIP10.63□□□□□ -0.71
UBBP4-201ENST00000583708 NPY5RQ15761 445 aa10.63□□□□□ -0.71
UBBP4-201ENST00000583708 MAP3K21Q5TCX8 1036 aa10.63□□□□□ -0.71
UBBP4-201ENST00000583708 SLC30A10Q6XR72 485 aa10.63□□□□□ -0.71
UBBP4-201ENST00000583708 BRAPQ7Z569 592 aa10.63□□□□□ -0.71
UBBP4-201ENST00000583708 NLRX1Q86UT6 975 aa10.63□□□□□ -0.71
UBBP4-201ENST00000583708 FCHSD1Q86WN1 690 aa10.63□□□□□ -0.71
UBBP4-201ENST00000583708 DIS3L2Q8IYB7 885 aaKnown RBP10.63□□□□□ -0.71
UBBP4-201ENST00000583708 NPLOC4Q8TAT6 608 aa10.63□□□□□ -0.71
UBBP4-201ENST00000583708 ARMC5Q96C12 935 aa10.63□□□□□ -0.71
UBBP4-201ENST00000583708 GPRASP2Q96D09 838 aa10.63□□□□□ -0.71
UBBP4-201ENST00000583708 ANO3Q9BYT9 981 aa10.63□□□□□ -0.71
UBBP4-201ENST00000583708 SYT1P21579 422 aa10.62□□□□□ -0.71
UBBP4-201ENST00000583708 ICAM3P32942 547 aa10.62□□□□□ -0.71
UBBP4-201ENST00000583708 ARHGAP4P98171 946 aa10.62□□□□□ -0.71
UBBP4-201ENST00000583708 ACVR2BQ13705 512 aa10.62□□□□□ -0.71
UBBP4-201ENST00000583708 GNL2Q13823 731 aaKnown RBP10.62□□□□□ -0.71
UBBP4-201ENST00000583708 PGM5Q15124 567 aa10.62□□□□□ -0.71
UBBP4-201ENST00000583708 SLC9C1Q4G0N8 1177 aa10.62□□□□□ -0.71
UBBP4-201ENST00000583708 PPP4R3AQ6IN85 833 aa10.62□□□□□ -0.71
UBBP4-201ENST00000583708 ARMCX2Q7L311 632 aa10.62□□□□□ -0.71
UBBP4-201ENST00000583708 NOSTRINQ8IVI9 506 aa10.62□□□□□ -0.71
UBBP4-201ENST00000583708 SCFD2Q8WU76 684 aa10.62□□□□□ -0.71
UBBP4-201ENST00000583708 CRYGNQ8WXF5 182 aa10.62□□□□□ -0.71
UBBP4-201ENST00000583708 FGD4Q96M96 766 aa10.62□□□□□ -0.71
UBBP4-201ENST00000583708 AIFM3Q96NN9 605 aa10.62□□□□□ -0.71
UBBP4-201ENST00000583708 INPP4AQ96PE3 977 aaPredicted RBP10.62□□□□□ -0.71
UBBP4-201ENST00000583708 SENP7Q9BQF6 1050 aa10.62□□□□□ -0.71
UBBP4-201ENST00000583708 HMX1Q9NP08 348 aaPredicted RBP10.62□□□□□ -0.71
UBBP4-201ENST00000583708 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.62□□□□□ -0.71
UBBP4-201ENST00000583708 COL20A1Q9P218 1284 aa10.62□□□□□ -0.71
UBBP4-201ENST00000583708 BIN2Q9UBW5 565 aaPredicted RBP10.62□□□□□ -0.71
UBBP4-201ENST00000583708 FAM184BQ9ULE4 1060 aa10.62□□□□□ -0.71
UBBP4-201ENST00000583708 NOL7Q9UMY1 257 aaKnown RBP10.62□□□□□ -0.71
UBBP4-201ENST00000583708 KCNJ14Q9UNX9 436 aa10.62□□□□□ -0.71
UBBP4-201ENST00000583708 CASP8AP2Q9UKL3 1982 aa10.62□□□□□ -0.71
UBBP4-201ENST00000583708 MGAMO43451 1857 aa10.61□□□□□ -0.71
UBBP4-201ENST00000583708 STX6O43752 255 aa10.61□□□□□ -0.71
UBBP4-201ENST00000583708 SNAI1O95863 264 aaPredicted RBP10.61□□□□□ -0.71
UBBP4-201ENST00000583708 BMP15O95972 392 aa10.61□□□□□ -0.71
UBBP4-201ENST00000583708 ZNF76P36508 570 aa10.61□□□□□ -0.71
UBBP4-201ENST00000583708 NUCB2P80303 420 aa10.61□□□□□ -0.71
UBBP4-201ENST00000583708 SETQ01105 290 aaPredicted RBP10.61□□□□□ -0.71
UBBP4-201ENST00000583708 TTLL4Q14679 1199 aa10.61□□□□□ -0.71
UBBP4-201ENST00000583708 UBE2SQ16763 222 aa10.61□□□□□ -0.71
UBBP4-201ENST00000583708 CEP55Q53EZ4 464 aa10.61□□□□□ -0.71
UBBP4-201ENST00000583708 RILPL1Q5EBL4 403 aa10.61□□□□□ -0.71
UBBP4-201ENST00000583708 JAKMIP3Q5VZ66 844 aa10.61□□□□□ -0.71
UBBP4-201ENST00000583708 ATL3Q6DD88 541 aa10.61□□□□□ -0.71
UBBP4-201ENST00000583708 NEK8Q86SG6 692 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms