RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 IRS2Q9Y4H2 1338 aa5.66□□□□□ -1.5
VAPA-206ENST00000583475 TCAF2A6NFQ2 919 aa5.65□□□□□ -1.5
VAPA-206ENST00000583475 N4BP3O15049 544 aa5.65□□□□□ -1.5
VAPA-206ENST00000583475 MEFVO15553 781 aaPredicted RBP5.65□□□□□ -1.5
VAPA-206ENST00000583475 LCP1P13796 627 aa5.65□□□□□ -1.5
VAPA-206ENST00000583475 CFPP27918 469 aa5.65□□□□□ -1.5
VAPA-206ENST00000583475 EPHB3P54753 998 aa5.65□□□□□ -1.5
VAPA-206ENST00000583475 JAG1P78504 1218 aa5.65□□□□□ -1.5
VAPA-206ENST00000583475 PRR5P85299 388 aa5.65□□□□□ -1.5
VAPA-206ENST00000583475 MAP4K2Q12851 820 aa5.65□□□□□ -1.5
VAPA-206ENST00000583475 KCNA10Q16322 511 aa5.65□□□□□ -1.5
VAPA-206ENST00000583475 ZC3H14Q6PJT7 736 aaKnown RBP5.65□□□□□ -1.5
VAPA-206ENST00000583475 USP33Q8TEY7 942 aa5.65□□□□□ -1.5
VAPA-206ENST00000583475 OSBP2Q969R2 916 aa5.65□□□□□ -1.5
VAPA-206ENST00000583475 RXFP1Q9HBX9 757 aa5.65□□□□□ -1.5
VAPA-206ENST00000583475 PCDHA5Q9Y5H7 936 aa5.65□□□□□ -1.5
VAPA-206ENST00000583475 TIMM13Q9Y5L4 95 aaPredicted RBP5.65□□□□□ -1.5
VAPA-206ENST00000583475 NPFFR2Q9Y5X5 522 aa5.65□□□□□ -1.5
VAPA-206ENST00000583475 NTRK1P04629 796 aa5.64□□□□□ -1.51
VAPA-206ENST00000583475 FGFR1P11362 822 aa5.64□□□□□ -1.51
VAPA-206ENST00000583475 LTBRP36941 435 aa5.64□□□□□ -1.51
VAPA-206ENST00000583475 SF3A1Q15459 793 aaKnown RBP5.64□□□□□ -1.51
VAPA-206ENST00000583475 C1QL4Q86Z23 238 aa5.64□□□□□ -1.51
VAPA-206ENST00000583475 IGDCC3Q8IVU1 814 aa5.64□□□□□ -1.51
VAPA-206ENST00000583475 TEX2Q8IWB9 1127 aa5.64□□□□□ -1.51
VAPA-206ENST00000583475 PPIL6Q8IXY8 311 aa5.64□□□□□ -1.51
VAPA-206ENST00000583475 NETO2Q8NC67 525 aa5.64□□□□□ -1.51
VAPA-206ENST00000583475 MZB1Q8WU39 189 aa5.64□□□□□ -1.51
VAPA-206ENST00000583475 KCTD13Q8WZ19 329 aa5.64□□□□□ -1.51
VAPA-206ENST00000583475 AARSD1Q9BTE6 412 aaKnown RBP5.64□□□□□ -1.51
VAPA-206ENST00000583475 SPATA9Q9BWV2 254 aa5.64□□□□□ -1.51
VAPA-206ENST00000583475 MARCH2Q9P0N8 246 aa5.64□□□□□ -1.51
VAPA-206ENST00000583475 PLA2G2DQ9UNK4 145 aa5.64□□□□□ -1.51
VAPA-206ENST00000583475 KRTAP4-8A0A0G2JLE6 195 aa5.63□□□□□ -1.51
VAPA-206ENST00000583475 FAM221BA6H8Z2 402 aa5.63□□□□□ -1.51
VAPA-206ENST00000583475 CCDC85CA6NKD9 419 aa5.63□□□□□ -1.51
VAPA-206ENST00000583475 C22orf46C9J442 243 aa5.63□□□□□ -1.51
VAPA-206ENST00000583475 PRODHO43272 600 aa5.63□□□□□ -1.51
VAPA-206ENST00000583475 ADCY3O60266 1144 aa5.63□□□□□ -1.51
VAPA-206ENST00000583475 PABPC1P11940 636 aaKnown RBP5.63□□□□□ -1.51
VAPA-206ENST00000583475 FBLN1P23142 703 aa5.63□□□□□ -1.51
VAPA-206ENST00000583475 BCL6P41182 706 aa5.63□□□□□ -1.51
VAPA-206ENST00000583475 NCKAP1LP55160 1127 aa5.63□□□□□ -1.51
VAPA-206ENST00000583475 LINC00310P59036 64 aa5.63□□□□□ -1.51
VAPA-206ENST00000583475 RPL11P62913 178 aaKnown RBP5.63□□□□□ -1.51
VAPA-206ENST00000583475 ZNF200P98182 395 aaPredicted RBP5.63□□□□□ -1.51
VAPA-206ENST00000583475 KCNAB2Q13303 367 aa5.63□□□□□ -1.51
VAPA-206ENST00000583475 SOGA3Q5TF21 947 aa5.63□□□□□ -1.51
VAPA-206ENST00000583475 YOD1Q5VVQ6 348 aaPredicted RBP5.63□□□□□ -1.51
VAPA-206ENST00000583475 WWC2Q6AWC2 1192 aa5.63□□□□□ -1.51
VAPA-206ENST00000583475 CABP7Q86V35 215 aa5.63□□□□□ -1.51
VAPA-206ENST00000583475 LRRC47Q8N1G4 583 aaKnown RBP5.63□□□□□ -1.51
VAPA-206ENST00000583475 SREK1Q8WXA9 508 aaKnown RBP5.63□□□□□ -1.51
VAPA-206ENST00000583475 TOX2Q96NM4 488 aa5.63□□□□□ -1.51
VAPA-206ENST00000583475 EPB41L4AQ9HCS5 686 aaPredicted RBP5.63□□□□□ -1.51
VAPA-206ENST00000583475 BTG4Q9NY30 223 aa5.63□□□□□ -1.51
VAPA-206ENST00000583475 FBXL7Q9UJT9 491 aa5.63□□□□□ -1.51
VAPA-206ENST00000583475 TRAV20A0A0B4J274 112 aa5.62□□□□□ -1.51
VAPA-206ENST00000583475 IRS4O14654 1257 aaPredicted RBP5.62□□□□□ -1.51
VAPA-206ENST00000583475 DIAPH1O60610 1272 aaKnown RBP5.62□□□□□ -1.51
VAPA-206ENST00000583475 RASA3Q14644 834 aa5.62□□□□□ -1.51
VAPA-206ENST00000583475 SSPNQ14714 243 aa5.62□□□□□ -1.51
VAPA-206ENST00000583475 MTERF2Q49AM1 385 aa5.62□□□□□ -1.51
VAPA-206ENST00000583475 NSMFQ6X4W1 530 aa5.62□□□□□ -1.51
VAPA-206ENST00000583475 CEP68Q76N32 757 aa5.62□□□□□ -1.51
VAPA-206ENST00000583475 LRP10Q7Z4F1 713 aa5.62□□□□□ -1.51
VAPA-206ENST00000583475 NLRP10Q86W26 655 aa5.62□□□□□ -1.51
VAPA-206ENST00000583475 TMEFF1Q8IYR6 380 aa5.62□□□□□ -1.51
VAPA-206ENST00000583475 Q8N1Y9 231 aa5.62□□□□□ -1.51
VAPA-206ENST00000583475 PANK1Q8TE04 598 aa5.62□□□□□ -1.51
VAPA-206ENST00000583475 PEX11GQ96HA9 241 aa5.62□□□□□ -1.51
VAPA-206ENST00000583475 SIGLEC10Q96LC7 697 aa5.62□□□□□ -1.51
VAPA-206ENST00000583475 PFDN2Q9UHV9 154 aa5.62□□□□□ -1.51
VAPA-206ENST00000583475 DBR1Q9UK59 544 aaKnown RBP5.62□□□□□ -1.51
VAPA-206ENST00000583475 CNOT6Q9ULM6 557 aaKnown RBP5.62□□□□□ -1.51
VAPA-206ENST00000583475 SIT1Q9Y3P8 196 aa5.62□□□□□ -1.51
VAPA-206ENST00000583475 PCDHA2Q9Y5H9 948 aa5.62□□□□□ -1.51
VAPA-206ENST00000583475 X6R8D5 127 aa5.62□□□□□ -1.51
VAPA-206ENST00000583475 IGFBP6P24592 240 aaPredicted RBP5.61□□□□□ -1.51
VAPA-206ENST00000583475 FPR2P25090 351 aa5.61□□□□□ -1.51
VAPA-206ENST00000583475 GTF2A2P52657 109 aa5.61□□□□□ -1.51
VAPA-206ENST00000583475 RBM10P98175 930 aaKnown RBP5.61□□□□□ -1.51
VAPA-206ENST00000583475 LSAMPQ13449 338 aa5.61□□□□□ -1.51
VAPA-206ENST00000583475 NTRK3Q16288 839 aa5.61□□□□□ -1.51
VAPA-206ENST00000583475 FOXB2Q5VYV0 432 aa5.61□□□□□ -1.51
VAPA-206ENST00000583475 USP53Q70EK8 1073 aa5.61□□□□□ -1.51
VAPA-206ENST00000583475 LRRC56Q8IYG6 542 aaPredicted RBP5.61□□□□□ -1.51
VAPA-206ENST00000583475 ZBTB38Q8NAP3 1195 aaPredicted RBP5.61□□□□□ -1.51
VAPA-206ENST00000583475 PMFBP1Q8TBY8 1022 aa5.61□□□□□ -1.51
VAPA-206ENST00000583475 MKL1Q969V6 931 aa5.61□□□□□ -1.51
VAPA-206ENST00000583475 TSPAN17Q96FV3 270 aa5.61□□□□□ -1.51
VAPA-206ENST00000583475 TRMT2BQ96GJ1 504 aaKnown RBP5.61□□□□□ -1.51
VAPA-206ENST00000583475 DNAJC2Q99543 621 aaKnown RBP5.61□□□□□ -1.51
VAPA-206ENST00000583475 CDIP1Q9H305 208 aa5.61□□□□□ -1.51
VAPA-206ENST00000583475 BCAS3Q9H6U6 928 aa5.61□□□□□ -1.51
VAPA-206ENST00000583475 GPR27Q9NS67 375 aa5.61□□□□□ -1.51
VAPA-206ENST00000583475 SNTG2Q9NY99 539 aa5.61□□□□□ -1.51
VAPA-206ENST00000583475 KCTD3Q9Y597 815 aa5.61□□□□□ -1.51
VAPA-206ENST00000583475 IRAK3Q9Y616 596 aa5.61□□□□□ -1.51
VAPA-206ENST00000583475 SGSM2O43147 1006 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms