RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 PPP2R2DQ66LE6 453 aa11.36□□□□□ -0.59
CDK5RAP3-227ENST00000583352 MFSD6Q6ZSS7 791 aa11.36□□□□□ -0.59
CDK5RAP3-227ENST00000583352 SCFD2Q8WU76 684 aa11.36□□□□□ -0.59
CDK5RAP3-227ENST00000583352 CLEC4DQ8WXI8 215 aa11.36□□□□□ -0.59
CDK5RAP3-227ENST00000583352 FAM227BQ96M60 508 aa11.36□□□□□ -0.59
CDK5RAP3-227ENST00000583352 TTC14Q96N46 770 aa11.36□□□□□ -0.59
CDK5RAP3-227ENST00000583352 PCDHA11Q9Y5I1 949 aa11.36□□□□□ -0.59
CDK5RAP3-227ENST00000583352 ACTN1P12814 892 aa11.35□□□□□ -0.59
CDK5RAP3-227ENST00000583352 ATP2A2P16615 1042 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-227ENST00000583352 RFC2P35250 354 aa11.35□□□□□ -0.59
CDK5RAP3-227ENST00000583352 RPS6P62753 249 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-227ENST00000583352 MRPS5P82675 430 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-227ENST00000583352 NMIQ13287 307 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-227ENST00000583352 DEFB128Q7Z7B8 93 aa11.35□□□□□ -0.59
CDK5RAP3-227ENST00000583352 RETREG2Q8NC44 543 aa11.35□□□□□ -0.59
CDK5RAP3-227ENST00000583352 IL27Q8NEV9 243 aa11.35□□□□□ -0.59
CDK5RAP3-227ENST00000583352 DNERQ8NFT8 737 aa11.35□□□□□ -0.59
CDK5RAP3-227ENST00000583352 ASB2Q96Q27 587 aa11.35□□□□□ -0.59
CDK5RAP3-227ENST00000583352 TSPYL2Q9H2G4 693 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-227ENST00000583352 RNF41Q9H4P4 317 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-227ENST00000583352 CCDC171Q6TFL3 1326 aa11.35□□□□□ -0.59
CDK5RAP3-227ENST00000583352 TRIM6-TRIM34B2RNG4 842 aa11.34□□□□□ -0.59
CDK5RAP3-227ENST00000583352 SNHG28P0DPA3 235 aa11.34□□□□□ -0.59
CDK5RAP3-227ENST00000583352 TXNP10599 105 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-227ENST00000583352 MYOGP15173 224 aa11.34□□□□□ -0.59
CDK5RAP3-227ENST00000583352 EDNRBP24530 442 aa11.34□□□□□ -0.59
CDK5RAP3-227ENST00000583352 PTPN11Q06124 597 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-227ENST00000583352 TTLL4Q14679 1199 aa11.34□□□□□ -0.59
CDK5RAP3-227ENST00000583352 NBPF20Q3BBV1 942 aa11.34□□□□□ -0.59
CDK5RAP3-227ENST00000583352 GPATCH4Q5T3I0 446 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-227ENST00000583352 NFRKBQ6P4R8 1299 aa11.34□□□□□ -0.59
CDK5RAP3-227ENST00000583352 ZNF589Q86UQ0 364 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-227ENST00000583352 ESR2Q92731 530 aa11.34□□□□□ -0.59
CDK5RAP3-227ENST00000583352 VWCEQ96DN2 955 aa11.34□□□□□ -0.59
CDK5RAP3-227ENST00000583352 USP26Q9BXU7 913 aa11.34□□□□□ -0.59
CDK5RAP3-227ENST00000583352 NOD1Q9Y239 953 aa11.34□□□□□ -0.59
CDK5RAP3-227ENST00000583352 MYO9BQ13459 2157 aa11.33□□□□□ -0.6
CDK5RAP3-227ENST00000583352 A6NJR5 290 aa11.33□□□□□ -0.6
CDK5RAP3-227ENST00000583352 PITPNM1O00562 1244 aa11.33□□□□□ -0.6
CDK5RAP3-227ENST00000583352 CHMLP26374 656 aa11.33□□□□□ -0.6
CDK5RAP3-227ENST00000583352 NT5C2P49902 561 aa11.33□□□□□ -0.6
CDK5RAP3-227ENST00000583352 BFSP2Q13515 415 aa11.33□□□□□ -0.6
CDK5RAP3-227ENST00000583352 USH1GQ495M9 461 aa11.33□□□□□ -0.6
CDK5RAP3-227ENST00000583352 CCDC178Q5BJE1 867 aa11.33□□□□□ -0.6
CDK5RAP3-227ENST00000583352 TMEM67Q5HYA8 995 aa11.33□□□□□ -0.6
CDK5RAP3-227ENST00000583352 DGKHQ86XP1 1220 aa11.33□□□□□ -0.6
CDK5RAP3-227ENST00000583352 TBC1D10CQ8IV04 446 aa11.33□□□□□ -0.6
CDK5RAP3-227ENST00000583352 MICALL1Q8N3F8 863 aa11.33□□□□□ -0.6
CDK5RAP3-227ENST00000583352 RGS22Q8NE09 1264 aa11.33□□□□□ -0.6
CDK5RAP3-227ENST00000583352 ADAMTS19Q8TE59 1207 aa11.33□□□□□ -0.6
CDK5RAP3-227ENST00000583352 COPS5Q92905 334 aa11.33□□□□□ -0.6
CDK5RAP3-227ENST00000583352 RILPL2Q969X0 211 aa11.33□□□□□ -0.6
CDK5RAP3-227ENST00000583352 SLC9A7Q96T83 725 aa11.33□□□□□ -0.6
CDK5RAP3-227ENST00000583352 KIF2CQ99661 725 aa11.33□□□□□ -0.6
CDK5RAP3-227ENST00000583352 SCN10AQ9Y5Y9 1956 aa11.33□□□□□ -0.6
CDK5RAP3-227ENST00000583352 IQCF3P0C7M6 154 aa11.32□□□□□ -0.6
CDK5RAP3-227ENST00000583352 GOLGA8HP0CJ92 632 aa11.32□□□□□ -0.6
CDK5RAP3-227ENST00000583352 CDC37Q16543 378 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-227ENST00000583352 CCDC155Q8N6L0 562 aa11.32□□□□□ -0.6
CDK5RAP3-227ENST00000583352 PHOSPHO2Q8TCD6 241 aa11.32□□□□□ -0.6
CDK5RAP3-227ENST00000583352 PPP1R13LQ8WUF5 828 aa11.32□□□□□ -0.6
CDK5RAP3-227ENST00000583352 ZKSCAN3Q9BRR0 538 aa11.32□□□□□ -0.6
CDK5RAP3-227ENST00000583352 FTOQ9C0B1 505 aaKnown RBP eCLIP11.32□□□□□ -0.6
CDK5RAP3-227ENST00000583352 UBA5Q9GZZ9 404 aa11.32□□□□□ -0.6
CDK5RAP3-227ENST00000583352 MAF1Q9H063 256 aa11.32□□□□□ -0.6
CDK5RAP3-227ENST00000583352 ABCB11O95342 1321 aa11.32□□□□□ -0.6
CDK5RAP3-227ENST00000583352 NEDD4P46934 1319 aa11.32□□□□□ -0.6
CDK5RAP3-227ENST00000583352 DNAH12Q6ZR08 3092 aa11.32□□□□□ -0.6
CDK5RAP3-227ENST00000583352 SCN5AQ14524 2016 aa11.31□□□□□ -0.6
CDK5RAP3-227ENST00000583352 KIF28PB7ZC32 967 aa11.31□□□□□ -0.6
CDK5RAP3-227ENST00000583352 ZNF213O14771 459 aa11.31□□□□□ -0.6
CDK5RAP3-227ENST00000583352 GTPBP6O43824 516 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-227ENST00000583352 GH1P01241 217 aa11.31□□□□□ -0.6
CDK5RAP3-227ENST00000583352 CA3P07451 260 aa11.31□□□□□ -0.6
CDK5RAP3-227ENST00000583352 CHMP4BP1P59074 171 aa11.31□□□□□ -0.6
CDK5RAP3-227ENST00000583352 CASC1Q6TDU7 716 aa11.31□□□□□ -0.6
CDK5RAP3-227ENST00000583352 IQCA1Q86XH1 822 aa11.31□□□□□ -0.6
CDK5RAP3-227ENST00000583352 MCF2L2Q86YR7 1114 aa11.31□□□□□ -0.6
CDK5RAP3-227ENST00000583352 PNMA1Q8ND90 353 aa11.31□□□□□ -0.6
CDK5RAP3-227ENST00000583352 UHRF1Q96T88 793 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-227ENST00000583352 ESYT1Q9BSJ8 1104 aa11.31□□□□□ -0.6
CDK5RAP3-227ENST00000583352 CPVLQ9H3G5 476 aa11.31□□□□□ -0.6
CDK5RAP3-227ENST00000583352 KAT14Q9H8E8 782 aa11.31□□□□□ -0.6
CDK5RAP3-227ENST00000583352 TANC1Q9C0D5 1861 aa11.31□□□□□ -0.6
CDK5RAP3-227ENST00000583352 DHX16O60231 1041 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-227ENST00000583352 KDM4AO75164 1064 aa11.3□□□□□ -0.6
CDK5RAP3-227ENST00000583352 BAIAP3O94812 1187 aa11.3□□□□□ -0.6
CDK5RAP3-227ENST00000583352 ARIH2O95376 493 aa11.3□□□□□ -0.6
CDK5RAP3-227ENST00000583352 MMP3P08254 477 aa11.3□□□□□ -0.6
CDK5RAP3-227ENST00000583352 CASTP20810 708 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-227ENST00000583352 SKIV2LQ15477 1246 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-227ENST00000583352 PTGISQ16647 500 aa11.3□□□□□ -0.6
CDK5RAP3-227ENST00000583352 AAK1Q2M2I8 961 aa11.3□□□□□ -0.6
CDK5RAP3-227ENST00000583352 ASPRV1Q53RT3 343 aa11.3□□□□□ -0.6
CDK5RAP3-227ENST00000583352 CCDC62Q6P9F0 684 aa11.3□□□□□ -0.6
CDK5RAP3-227ENST00000583352 SEPT14Q6ZU15 432 aa11.3□□□□□ -0.6
CDK5RAP3-227ENST00000583352 HERC6Q8IVU3 1022 aa11.3□□□□□ -0.6
CDK5RAP3-227ENST00000583352 CAGE1Q8TC20 777 aa11.3□□□□□ -0.6
CDK5RAP3-227ENST00000583352 SYTL5Q8TDW5 730 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-227ENST00000583352 NSUN6Q8TEA1 469 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 276.9 ms