RNA–Protein interactions for RNA: ENST00000582513.5

TRAPPC8-210, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 3,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-210ENST00000582513 MINPP1Q9UNW1 487 aa17.08■□□□□ 0.33
TRAPPC8-210ENST00000582513 MAPK8IP1Q9UQF2 711 aa17.08■□□□□ 0.33
TRAPPC8-210ENST00000582513 TIAM2Q8IVF5 1701 aa17.08■□□□□ 0.33
TRAPPC8-210ENST00000582513 SYNRGQ9UMZ2 1314 aa17.08■□□□□ 0.32
TRAPPC8-210ENST00000582513 TTC38Q5R3I4 469 aa17.08■□□□□ 0.32
TRAPPC8-210ENST00000582513 TRIM68Q6AZZ1 485 aa17.08■□□□□ 0.32
TRAPPC8-210ENST00000582513 GSPT2Q8IYD1 628 aaKnown RBP17.08■□□□□ 0.32
TRAPPC8-210ENST00000582513 OSBPL9Q96SU4 736 aa17.08■□□□□ 0.32
TRAPPC8-210ENST00000582513 PRPF3O43395 683 aaKnown RBP17.08■□□□□ 0.32
TRAPPC8-210ENST00000582513 STX10O60499 249 aa17.08■□□□□ 0.32
TRAPPC8-210ENST00000582513 RBL2Q08999 1139 aa17.08■□□□□ 0.32
TRAPPC8-210ENST00000582513 NPY5RQ15761 445 aa17.08■□□□□ 0.32
TRAPPC8-210ENST00000582513 KANK3Q6NY19 840 aa17.08■□□□□ 0.32
TRAPPC8-210ENST00000582513 ARAP2Q8WZ64 1704 aa17.07■□□□□ 0.32
TRAPPC8-210ENST00000582513 hCG_2014768A0A024R1R8 64 aa17.07■□□□□ 0.32
TRAPPC8-210ENST00000582513 MECOMQ03112 1051 aa17.07■□□□□ 0.32
TRAPPC8-210ENST00000582513 SLC51AQ86UW1 340 aa17.07■□□□□ 0.32
TRAPPC8-210ENST00000582513 SPATA20Q8TB22 786 aa17.07■□□□□ 0.32
TRAPPC8-210ENST00000582513 RUFY1Q96T51 708 aa17.07■□□□□ 0.32
TRAPPC8-210ENST00000582513 CTNND2Q9UQB3 1225 aa17.07■□□□□ 0.32
TRAPPC8-210ENST00000582513 ZNF804BA4D1E1 1349 aa17.07■□□□□ 0.32
TRAPPC8-210ENST00000582513 EIF3HO15372 352 aaKnown RBP eCLIP17.07■□□□□ 0.32
TRAPPC8-210ENST00000582513 PRDX5P30044 214 aa17.07■□□□□ 0.32
TRAPPC8-210ENST00000582513 PPFIA1Q13136 1202 aa17.07■□□□□ 0.32
TRAPPC8-210ENST00000582513 CWF19L1Q69YN2 538 aaKnown RBP17.07■□□□□ 0.32
TRAPPC8-210ENST00000582513 ELOA2Q8IYF1 753 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC8-210ENST00000582513 TRIML1Q8N9V2 468 aa17.07■□□□□ 0.32
TRAPPC8-210ENST00000582513 BATF3Q9NR55 127 aa17.07■□□□□ 0.32
TRAPPC8-210ENST00000582513 BCORQ6W2J9 1755 aa17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 SYF2O95926 243 aaKnown RBP17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 NLRP5P59047 1200 aa17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 MXRA7P84157 204 aa17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 MIS18BP1Q6P0N0 1132 aa17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 CCDC50Q8IVM0 306 aa17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 DOT1LQ8TEK3 1739 aa17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 CICQ96RK0 1608 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 A0A1B0GTH6 734 aa17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 CTAGE15A4D2H0 777 aa17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 CTAGE8P0CG41 777 aa17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 TMTC3Q6ZXV5 915 aa17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 APTXQ7Z2E3 356 aaKnown RBP17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 CTAGE6Q86UF2 777 aa17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 CTAGE4Q8IX94 777 aa17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 RASGRP4Q8TDF6 673 aa17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 L3MBTL1Q9Y468 752 aa17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 PCDHGC5Q9Y5F6 944 aa17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 AKR1B15C9JRZ8 316 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 CUL3Q13618 768 aa17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 MSL1Q68DK7 614 aa17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 KCTD16Q68DU8 428 aa17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 RAD9BQ6WBX8 426 aa17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 MAEAQ7L5Y9 396 aa17.06■□□□□ 0.32
TRAPPC8-210ENST00000582513 NUTM2BA6NNL0 878 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC8-210ENST00000582513 NUTM2EB1AL46 878 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC8-210ENST00000582513 ERCC5P28715 1186 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC8-210ENST00000582513 CUL4BQ13620 913 aa17.05■□□□□ 0.32
TRAPPC8-210ENST00000582513 SPATA1Q5VX52 437 aa17.05■□□□□ 0.32
TRAPPC8-210ENST00000582513 LZTS2Q9BRK4 669 aa17.05■□□□□ 0.32
TRAPPC8-210ENST00000582513 BCL9LQ86UU0 1499 aa17.05■□□□□ 0.32
TRAPPC8-210ENST00000582513 CLTAP09496 248 aa17.05■□□□□ 0.32
TRAPPC8-210ENST00000582513 CTCFP49711 727 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC8-210ENST00000582513 PPFIBP1Q86W92 1011 aa17.05■□□□□ 0.32
TRAPPC8-210ENST00000582513 FCHSD1Q86WN1 690 aa17.05■□□□□ 0.32
TRAPPC8-210ENST00000582513 GPKOWQ92917 476 aaPredicted RBP eCLIP17.05■□□□□ 0.322e-6■■■■□ 21.7
TRAPPC8-210ENST00000582513 VCPKMTQ9H867 229 aa17.05■□□□□ 0.32
TRAPPC8-210ENST00000582513 RHBDL2Q9NX52 303 aa17.05■□□□□ 0.32
TRAPPC8-210ENST00000582513 NHSL1Q5SYE7 1610 aa17.05■□□□□ 0.32
TRAPPC8-210ENST00000582513 PPP1R3GB7ZBB8 358 aa17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 RCAN1P53805 252 aa17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 UBE4AQ14139 1066 aa17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 RASSF8Q8NHQ8 419 aa17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 HNRNPLLQ8WVV9 542 aaKnown RBP17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 MTA3Q9BTC8 594 aa17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 DNAAF2Q9NVR5 837 aaKnown RBP17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 XDHP47989 1333 aa17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 CNTNAP5Q8WYK1 1306 aa17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 CASP14P31944 242 aa17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 IL17AQ16552 155 aa17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 RRAGBQ5VZM2 374 aa17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 GET4Q7L5D6 327 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 RBM12BQ8IXT5 1001 aaKnown RBP17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 NSUN4Q96CB9 384 aaKnown RBP17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 RBM41Q96IZ5 413 aaKnown RBP17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 ALS2CR12Q96Q35 445 aa17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 VPS16Q9H269 839 aa17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 HDAC6Q9UBN7 1215 aa17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 STRCQ7RTU9 1775 aa17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 ZNF569Q5MCW4 686 aa17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 HIBCHQ6NVY1 386 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 TLDC1Q6P9B6 456 aa17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 SH3RF1Q7Z6J0 888 aa17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 TNFRSF25Q93038 417 aa17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 BRIP1Q9BX63 1249 aa17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 DCP1AQ9NPI6 582 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 ANKIB1Q9P2G1 1089 aa17.04■□□□□ 0.32
TRAPPC8-210ENST00000582513 TSPY2A6NKD2 308 aa17.03■□□□□ 0.32
TRAPPC8-210ENST00000582513 GALNT17Q6IS24 598 aa17.03■□□□□ 0.32
TRAPPC8-210ENST00000582513 TXNRD3Q86VQ6 643 aa17.03■□□□□ 0.32
TRAPPC8-210ENST00000582513 MFN1Q8IWA4 741 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms