RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 TAPT1Q6NXT6 567 aa18.9■□□□□ 0.62
RNF43-206ENST00000582293 PPP1R18Q6NYC8 613 aa18.9■□□□□ 0.62
RNF43-206ENST00000582293 FCHSD1Q86WN1 690 aa18.9■□□□□ 0.62
RNF43-206ENST00000582293 FBXO16Q8IX29 292 aaPredicted RBP18.9■□□□□ 0.62
RNF43-206ENST00000582293 NSUN7Q8NE18 718 aaKnown RBP18.9■□□□□ 0.62
RNF43-206ENST00000582293 RMDN3Q96TC7 470 aa18.9■□□□□ 0.62
RNF43-206ENST00000582293 TMEM106CQ9BVX2 250 aa18.9■□□□□ 0.62
RNF43-206ENST00000582293 ABHD16BQ9H3Z7 469 aa18.9■□□□□ 0.62
RNF43-206ENST00000582293 PSTPIP2Q9H939 334 aa18.9■□□□□ 0.62
RNF43-206ENST00000582293 PDGFCQ9NRA1 345 aa18.9■□□□□ 0.62
RNF43-206ENST00000582293 DDX20Q9UHI6 824 aaKnown RBP18.9■□□□□ 0.62
RNF43-206ENST00000582293 CPLX1O14810 134 aa18.89■□□□□ 0.61
RNF43-206ENST00000582293 FDPSP14324 419 aaKnown RBP18.89■□□□□ 0.61
RNF43-206ENST00000582293 MNX1P50219 401 aaPredicted RBP18.89■□□□□ 0.61
RNF43-206ENST00000582293 NAPAP54920 295 aa18.89■□□□□ 0.61
RNF43-206ENST00000582293 SSRP1Q08945 709 aaKnown RBP18.89■□□□□ 0.61
RNF43-206ENST00000582293 ANO1Q5XXA6 986 aa18.89■□□□□ 0.61
RNF43-206ENST00000582293 EEPD1Q7L9B9 569 aa18.89■□□□□ 0.61
RNF43-206ENST00000582293 NSUN6Q8TEA1 469 aaKnown RBP18.89■□□□□ 0.61
RNF43-206ENST00000582293 LENG1Q96BZ8 264 aaPredicted RBP18.89■□□□□ 0.61
RNF43-206ENST00000582293 PDCD2LQ9BRP1 358 aa18.89■□□□□ 0.61
RNF43-206ENST00000582293 RIC8AQ9NPQ8 531 aa18.89■□□□□ 0.61
RNF43-206ENST00000582293 RBM27Q9P2N5 1060 aaKnown RBP18.89■□□□□ 0.61
RNF43-206ENST00000582293 ZHX1Q9UKY1 873 aaPredicted RBP18.89■□□□□ 0.61
RNF43-206ENST00000582293 CNPY2Q9Y2B0 182 aa18.89■□□□□ 0.61
RNF43-206ENST00000582293 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.88■□□□□ 0.61
RNF43-206ENST00000582293 JAK2O60674 1132 aa18.88■□□□□ 0.61
RNF43-206ENST00000582293 PTGS1P23219 599 aa18.88■□□□□ 0.61
RNF43-206ENST00000582293 CNGA1P29973 690 aa18.88■□□□□ 0.61
RNF43-206ENST00000582293 CLK2P49760 499 aaKnown RBP18.88■□□□□ 0.61
RNF43-206ENST00000582293 VPS54Q9P1Q0 977 aa18.88■□□□□ 0.61
RNF43-206ENST00000582293 OGDHLQ9ULD0 1010 aa18.88■□□□□ 0.61
RNF43-206ENST00000582293 STK36Q9NRP7 1315 aa18.88■□□□□ 0.61
RNF43-206ENST00000582293 KIAA0100Q14667 2235 aaKnown RBP18.88■□□□□ 0.61
RNF43-206ENST00000582293 ESYT2A0FGR8 921 aa18.87■□□□□ 0.61
RNF43-206ENST00000582293 SMCO2A6NFE2 343 aa18.87■□□□□ 0.61
RNF43-206ENST00000582293 RGS20O76081 388 aa18.87■□□□□ 0.61
RNF43-206ENST00000582293 DEXIO95424 95 aa18.87■□□□□ 0.61
RNF43-206ENST00000582293 NR3C2P08235 984 aa18.87■□□□□ 0.61
RNF43-206ENST00000582293 PGM5Q15124 567 aa18.87■□□□□ 0.61
RNF43-206ENST00000582293 NPY5RQ15761 445 aa18.87■□□□□ 0.61
RNF43-206ENST00000582293 CCDC144BQ3MJ40 725 aa18.87■□□□□ 0.61
RNF43-206ENST00000582293 ARHGEF16Q5VV41 709 aa18.87■□□□□ 0.61
RNF43-206ENST00000582293 TRIM22Q8IYM9 498 aa18.87■□□□□ 0.61
RNF43-206ENST00000582293 IWS1Q96ST2 819 aa18.87■□□□□ 0.61
RNF43-206ENST00000582293 ZMYND12Q9H0C1 365 aa18.87■□□□□ 0.61
RNF43-206ENST00000582293 VTA1Q9NP79 307 aa18.87■□□□□ 0.61
RNF43-206ENST00000582293 RBM47A0AV96 593 aaKnown RBP18.86■□□□□ 0.61
RNF43-206ENST00000582293 AKR1A1P14550 325 aa18.86■□□□□ 0.61
RNF43-206ENST00000582293 ADCYAP1R1P41586 468 aa18.86■□□□□ 0.61
RNF43-206ENST00000582293 ADCY7P51828 1080 aa18.86■□□□□ 0.61
RNF43-206ENST00000582293 IRX5P78411 483 aaPredicted RBP18.86■□□□□ 0.61
RNF43-206ENST00000582293 AKAP17AQ02040 695 aaKnown RBP18.86■□□□□ 0.61
RNF43-206ENST00000582293 CPLX2Q6PUV4 134 aaKnown RBP18.86■□□□□ 0.61
RNF43-206ENST00000582293 UBE2Q1Q7Z7E8 422 aa18.86■□□□□ 0.61
RNF43-206ENST00000582293 VSIG10LQ86VR7 867 aa18.86■□□□□ 0.61
RNF43-206ENST00000582293 CCDC83Q8IWF9 413 aa18.86■□□□□ 0.61
RNF43-206ENST00000582293 SMARCC2Q8TAQ2 1214 aa18.86■□□□□ 0.61
RNF43-206ENST00000582293 CUL5Q93034 780 aa18.86■□□□□ 0.61
RNF43-206ENST00000582293 ZFP91Q96JP5 570 aaPredicted RBP18.86■□□□□ 0.61
RNF43-206ENST00000582293 ZSCAN31Q96LW9 406 aaPredicted RBP18.86■□□□□ 0.61
RNF43-206ENST00000582293 GJB4Q9NTQ9 266 aa18.86■□□□□ 0.61
RNF43-206ENST00000582293 TMEM260Q9NX78 707 aa18.86■□□□□ 0.61
RNF43-206ENST00000582293 ST18O60284 1047 aa18.85■□□□□ 0.61
RNF43-206ENST00000582293 CDKL5O76039 1030 aa18.85■□□□□ 0.61
RNF43-206ENST00000582293 MRPS9P82933 396 aaKnown RBP18.85■□□□□ 0.61
RNF43-206ENST00000582293 PDE4DQ08499 809 aa18.85■□□□□ 0.61
RNF43-206ENST00000582293 PGBD1Q96JS3 809 aa18.85■□□□□ 0.61
RNF43-206ENST00000582293 SH3GLB2Q9NR46 395 aa18.85■□□□□ 0.61
RNF43-206ENST00000582293 FAM184BQ9ULE4 1060 aa18.85■□□□□ 0.61
RNF43-206ENST00000582293 PCDHA6Q9UN73 950 aa18.85■□□□□ 0.61
RNF43-206ENST00000582293 GNEQ9Y223 722 aaKnown RBP18.85■□□□□ 0.61
RNF43-206ENST00000582293 PCDHA8Q9Y5H6 950 aa18.85■□□□□ 0.61
RNF43-206ENST00000582293 KIAA1217Q5T5P2 1943 aa18.84■□□□□ 0.61
RNF43-206ENST00000582293 MSCO60682 206 aa18.84■□□□□ 0.61
RNF43-206ENST00000582293 ADAMTS4O75173 837 aa18.84■□□□□ 0.61
RNF43-206ENST00000582293 ARIH2O95376 493 aa18.84■□□□□ 0.61
RNF43-206ENST00000582293 SMPD1P17405 629 aa18.84■□□□□ 0.61
RNF43-206ENST00000582293 RGS19P49795 217 aa18.84■□□□□ 0.61
RNF43-206ENST00000582293 MRPL12P52815 198 aaKnown RBP18.84■□□□□ 0.61
RNF43-206ENST00000582293 GJC2Q5T442 439 aaPredicted RBP18.84■□□□□ 0.61
RNF43-206ENST00000582293 IFFO2Q5TF58 517 aa18.84■□□□□ 0.61
RNF43-206ENST00000582293 IL27Q8NEV9 243 aa18.84■□□□□ 0.61
RNF43-206ENST00000582293 DIS3LQ8TF46 1054 aaKnown RBP18.84■□□□□ 0.61
RNF43-206ENST00000582293 TMX3Q96JJ7 454 aa18.84■□□□□ 0.61
RNF43-206ENST00000582293 SH2B1Q9NRF2 756 aaPredicted RBP18.84■□□□□ 0.61
RNF43-206ENST00000582293 ORC3Q9UBD5 711 aaPredicted RBP18.84■□□□□ 0.61
RNF43-206ENST00000582293 M0R2N6 131 aa18.83■□□□□ 0.6
RNF43-206ENST00000582293 CTAGE5O15320 804 aa18.83■□□□□ 0.6
RNF43-206ENST00000582293 TFRCP02786 760 aaKnown RBP18.83■□□□□ 0.6
RNF43-206ENST00000582293 MYCLP12524 364 aaPredicted RBP18.83■□□□□ 0.6
RNF43-206ENST00000582293 STXBP2Q15833 593 aa18.83■□□□□ 0.6
RNF43-206ENST00000582293 CCDC62Q6P9F0 684 aa18.83■□□□□ 0.6
RNF43-206ENST00000582293 TEX2Q8IWB9 1127 aa18.83■□□□□ 0.6
RNF43-206ENST00000582293 MKI67P46013 3256 aaKnown RBP18.82■□□□□ 0.6
RNF43-206ENST00000582293 SYNRGQ9UMZ2 1314 aa18.82■□□□□ 0.6
RNF43-206ENST00000582293 MYADML2A6NDP7 307 aa18.82■□□□□ 0.6
RNF43-206ENST00000582293 DUSP11O75319 330 aaKnown RBP18.82■□□□□ 0.6
RNF43-206ENST00000582293 EIF3JO75822 258 aaKnown RBP18.82■□□□□ 0.6
RNF43-206ENST00000582293 PGK1P00558 417 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms