RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 BICD2Q8TD16 824 aa14.37□□□□□ -0.11
SRSF1-204ENST00000581979 KCNG4Q8TDN1 519 aa14.37□□□□□ -0.11
SRSF1-204ENST00000581979 NUP88Q99567 741 aaPredicted RBP14.37□□□□□ -0.11
SRSF1-204ENST00000581979 JMJD4Q9H9V9 463 aa14.37□□□□□ -0.11
SRSF1-204ENST00000581979 NOL7Q9UMY1 257 aaKnown RBP14.37□□□□□ -0.11
SRSF1-204ENST00000581979 PCDHA4Q9UN74 947 aa14.37□□□□□ -0.11
SRSF1-204ENST00000581979 PNMA6FA0A0J9YX94 578 aa14.36□□□□□ -0.11
SRSF1-204ENST00000581979 SPTLC2O15270 562 aa14.36□□□□□ -0.11
SRSF1-204ENST00000581979 DSG3P32926 999 aa14.36□□□□□ -0.11
SRSF1-204ENST00000581979 ME1P48163 572 aa14.36□□□□□ -0.11
SRSF1-204ENST00000581979 CACNB2Q08289 660 aaPredicted RBP14.36□□□□□ -0.11
SRSF1-204ENST00000581979 CCL14Q16627 93 aa14.36□□□□□ -0.11
SRSF1-204ENST00000581979 SPICE1Q8N0Z3 855 aa14.36□□□□□ -0.11
SRSF1-204ENST00000581979 SHCBP1Q8NEM2 672 aa14.36□□□□□ -0.11
SRSF1-204ENST00000581979 PGBD1Q96JS3 809 aa14.36□□□□□ -0.11
SRSF1-204ENST00000581979 MOV10L1Q9BXT6 1211 aaKnown RBP14.36□□□□□ -0.11
SRSF1-204ENST00000581979 SPATC1LQ9H0A9 340 aa14.36□□□□□ -0.11
SRSF1-204ENST00000581979 OGDHLQ9ULD0 1010 aa14.36□□□□□ -0.11
SRSF1-204ENST00000581979 IVNS1ABPQ9Y6Y0 642 aa14.36□□□□□ -0.11
SRSF1-204ENST00000581979 PARP14Q460N5 1801 aa14.36□□□□□ -0.11
SRSF1-204ENST00000581979 TMEM232C9JQI7 657 aa14.35□□□□□ -0.11
SRSF1-204ENST00000581979 DAGLBQ8NCG7 672 aa14.35□□□□□ -0.11
SRSF1-204ENST00000581979 TNFRSF25Q93038 417 aa14.35□□□□□ -0.11
SRSF1-204ENST00000581979 PAWRQ96IZ0 340 aaKnown RBP14.35□□□□□ -0.11
SRSF1-204ENST00000581979 C6orf50Q9HD87 102 aa14.35□□□□□ -0.11
SRSF1-204ENST00000581979 TMEM63CQ9P1W3 806 aa14.35□□□□□ -0.11
SRSF1-204ENST00000581979 ADAMTS5Q9UNA0 930 aa14.35□□□□□ -0.11
SRSF1-204ENST00000581979 FAM205CA6NFA0 338 aa14.35□□□□□ -0.11
SRSF1-204ENST00000581979 SMCO2A6NFE2 343 aa14.35□□□□□ -0.11
SRSF1-204ENST00000581979 ZBTB5O15062 677 aa14.35□□□□□ -0.11
SRSF1-204ENST00000581979 STRNO43815 780 aa14.35□□□□□ -0.11
SRSF1-204ENST00000581979 FLOT1O75955 427 aa14.35□□□□□ -0.11
SRSF1-204ENST00000581979 IGHA2P01877 340 aa14.35□□□□□ -0.11
SRSF1-204ENST00000581979 ATP2B1P20020 1258 aa14.35□□□□□ -0.11
SRSF1-204ENST00000581979 GNA11P29992 359 aa14.35□□□□□ -0.11
SRSF1-204ENST00000581979 MNX1P50219 401 aaPredicted RBP14.35□□□□□ -0.11
SRSF1-204ENST00000581979 SLC39A14Q15043 492 aa14.35□□□□□ -0.11
SRSF1-204ENST00000581979 EARS2Q5JPH6 523 aaKnown RBP14.35□□□□□ -0.11
SRSF1-204ENST00000581979 WDR78Q5VTH9 848 aa14.35□□□□□ -0.11
SRSF1-204ENST00000581979 NECAB2Q7Z6G3 386 aa14.35□□□□□ -0.11
SRSF1-204ENST00000581979 ZNF236Q9UL36 1845 aa14.35□□□□□ -0.11
SRSF1-204ENST00000581979 TOB1P50616 345 aaPredicted RBP14.34□□□□□ -0.11
SRSF1-204ENST00000581979 SYDE2Q5VT97 1194 aa14.34□□□□□ -0.11
SRSF1-204ENST00000581979 PIK3AP1Q6ZUJ8 805 aa14.34□□□□□ -0.11
SRSF1-204ENST00000581979 DIS3LQ8TF46 1054 aaKnown RBP14.34□□□□□ -0.11
SRSF1-204ENST00000581979 ATG4CQ96DT6 458 aa14.34□□□□□ -0.11
SRSF1-204ENST00000581979 MTMR8Q96EF0 704 aa14.34□□□□□ -0.11
SRSF1-204ENST00000581979 ZMYND12Q9H0C1 365 aa14.34□□□□□ -0.11
SRSF1-204ENST00000581979 FLRT1Q9NZU1 646 aa14.34□□□□□ -0.11
SRSF1-204ENST00000581979 PCDHA7Q9UN72 937 aa14.34□□□□□ -0.11
SRSF1-204ENST00000581979 CEP131Q9UPN4 1083 aa14.34□□□□□ -0.11
SRSF1-204ENST00000581979 COLQQ9Y215 455 aaPredicted RBP14.34□□□□□ -0.11
SRSF1-204ENST00000581979 CCDC194A0A1B0GVG4 234 aa14.33□□□□□ -0.12
SRSF1-204ENST00000581979 PPP6R2O75170 966 aa14.33□□□□□ -0.12
SRSF1-204ENST00000581979 STAT2P52630 851 aa14.33□□□□□ -0.12
SRSF1-204ENST00000581979 PTPAQ15257 358 aa14.33□□□□□ -0.12
SRSF1-204ENST00000581979 CDC37Q16543 378 aaPredicted RBP14.33□□□□□ -0.12
SRSF1-204ENST00000581979 QRICH1Q2TAL8 776 aa14.33□□□□□ -0.12
SRSF1-204ENST00000581979 ZSCAN23Q3MJ62 389 aa14.33□□□□□ -0.12
SRSF1-204ENST00000581979 FAM83BQ5T0W9 1011 aa14.33□□□□□ -0.12
SRSF1-204ENST00000581979 LHX8Q68G74 356 aa14.33□□□□□ -0.12
SRSF1-204ENST00000581979 PPP1R18Q6NYC8 613 aa14.33□□□□□ -0.12
SRSF1-204ENST00000581979 MROH8Q9H579 483 aa14.33□□□□□ -0.12
SRSF1-204ENST00000581979 PCDHA6Q9UN73 950 aa14.33□□□□□ -0.12
SRSF1-204ENST00000581979 PCDHB6Q9Y5E3 794 aa14.33□□□□□ -0.12
SRSF1-204ENST00000581979 PCDHA8Q9Y5H6 950 aa14.33□□□□□ -0.12
SRSF1-204ENST00000581979 NR2E3Q9Y5X4 410 aa14.33□□□□□ -0.12
SRSF1-204ENST00000581979 ESYT2A0FGR8 921 aa14.32□□□□□ -0.12
SRSF1-204ENST00000581979 ADAMTS3O15072 1205 aa14.32□□□□□ -0.12
SRSF1-204ENST00000581979 LIG1P18858 919 aa14.32□□□□□ -0.12
SRSF1-204ENST00000581979 ERCC3P19447 782 aa14.32□□□□□ -0.12
SRSF1-204ENST00000581979 MARCKSP29966 332 aaPredicted RBP14.32□□□□□ -0.12
SRSF1-204ENST00000581979 CCND3P30281 292 aaPredicted RBP14.32□□□□□ -0.12
SRSF1-204ENST00000581979 ADCY7P51828 1080 aa14.32□□□□□ -0.12
SRSF1-204ENST00000581979 CCDC183Q5T5S1 534 aa14.32□□□□□ -0.12
SRSF1-204ENST00000581979 MFSD14CQ5VZR4 134 aa14.32□□□□□ -0.12
SRSF1-204ENST00000581979 ADALQ6DHV7 355 aa14.32□□□□□ -0.12
SRSF1-204ENST00000581979 BTNL9Q6UXG8 535 aa14.32□□□□□ -0.12
SRSF1-204ENST00000581979 ABRAQ8N0Z2 381 aa14.32□□□□□ -0.12
SRSF1-204ENST00000581979 NPLOC4Q8TAT6 608 aa14.32□□□□□ -0.12
SRSF1-204ENST00000581979 RASGRP4Q8TDF6 673 aa14.32□□□□□ -0.12
SRSF1-204ENST00000581979 M0R2N6 131 aa14.32□□□□□ -0.12
SRSF1-204ENST00000581979 EVI5O60447 810 aa14.32□□□□□ -0.12
SRSF1-204ENST00000581979 PPP1R11O60927 126 aaPredicted RBP14.32□□□□□ -0.12
SRSF1-204ENST00000581979 ADORA2AP29274 412 aa14.32□□□□□ -0.12
SRSF1-204ENST00000581979 TMEM132BQ14DG7 1078 aa14.32□□□□□ -0.12
SRSF1-204ENST00000581979 TTC38Q5R3I4 469 aa14.32□□□□□ -0.12
SRSF1-204ENST00000581979 CCDC73Q6ZRK6 1079 aa14.32□□□□□ -0.12
SRSF1-204ENST00000581979 CHURC1Q8WUH1 139 aa14.32□□□□□ -0.12
SRSF1-204ENST00000581979 FBXO28Q9NVF7 368 aa14.32□□□□□ -0.12
SRSF1-204ENST00000581979 PPP1R9AQ9ULJ8 1098 aa14.32□□□□□ -0.12
SRSF1-204ENST00000581979 RANBP2P49792 3224 aaKnown RBP14.31□□□□□ -0.12
SRSF1-204ENST00000581979 ALPK3Q96L96 1907 aa14.31□□□□□ -0.12
SRSF1-204ENST00000581979 A0A1W2PQ27 194 aa14.31□□□□□ -0.12
SRSF1-204ENST00000581979 A0A1W2PQ64 194 aa14.31□□□□□ -0.12
SRSF1-204ENST00000581979 A0A1W2PQD8 194 aa14.31□□□□□ -0.12
SRSF1-204ENST00000581979 VWA5AO00534 786 aa14.31□□□□□ -0.12
SRSF1-204ENST00000581979 SLC25A27O95847 323 aa14.31□□□□□ -0.12
SRSF1-204ENST00000581979 TRAPPC10P48553 1259 aa14.31□□□□□ -0.12
SRSF1-204ENST00000581979 SNAP25P60880 206 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms