RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 RACK1P63244 317 aaKnown RBP6.27□□□□□ -1.41
SMCHD1-206ENST00000581631 DPY19L1Q2PZI1 675 aa6.27□□□□□ -1.41
SMCHD1-206ENST00000581631 FAM26FQ5R3K3 315 aa6.27□□□□□ -1.41
SMCHD1-206ENST00000581631 MBLAC2Q68D91 279 aa6.27□□□□□ -1.41
SMCHD1-206ENST00000581631 MIB1Q86YT6 1006 aa6.27□□□□□ -1.41
SMCHD1-206ENST00000581631 RCC1LQ96I51 464 aaKnown RBP6.27□□□□□ -1.41
SMCHD1-206ENST00000581631 CYP2C8P10632 490 aa6.26□□□□□ -1.41
SMCHD1-206ENST00000581631 C19orf47Q8N9M1 422 aaKnown RBP6.26□□□□□ -1.41
SMCHD1-206ENST00000581631 RNF34Q969K3 372 aa6.26□□□□□ -1.41
SMCHD1-206ENST00000581631 C8orf49Q96NF6 230 aa6.26□□□□□ -1.41
SMCHD1-206ENST00000581631 PHAXQ9H814 394 aaKnown RBP6.26□□□□□ -1.41
SMCHD1-206ENST00000581631 METTL5Q9NRN9 209 aaKnown RBP6.26□□□□□ -1.41
SMCHD1-206ENST00000581631 A0A1W2PQH9 124 aa6.25□□□□□ -1.41
SMCHD1-206ENST00000581631 NTRK1P04629 796 aa6.25□□□□□ -1.41
SMCHD1-206ENST00000581631 PAMP19021 973 aa6.25□□□□□ -1.41
SMCHD1-206ENST00000581631 SEPHS1P49903 392 aa6.25□□□□□ -1.41
SMCHD1-206ENST00000581631 CDSNQ15517 529 aa6.25□□□□□ -1.41
SMCHD1-206ENST00000581631 RGL3Q3MIN7 710 aa6.25□□□□□ -1.41
SMCHD1-206ENST00000581631 GNPTABQ3T906 1256 aa6.25□□□□□ -1.41
SMCHD1-206ENST00000581631 FBXW10Q5XX13 1052 aa6.25□□□□□ -1.41
SMCHD1-206ENST00000581631 CCDC81Q6ZN84 652 aa6.25□□□□□ -1.41
SMCHD1-206ENST00000581631 KYQ8NBH2 561 aa6.25□□□□□ -1.41
SMCHD1-206ENST00000581631 DPF3Q92784 378 aa6.25□□□□□ -1.41
SMCHD1-206ENST00000581631 COPS5Q92905 334 aa6.25□□□□□ -1.41
SMCHD1-206ENST00000581631 FGD4Q96M96 766 aa6.25□□□□□ -1.41
SMCHD1-206ENST00000581631 GBP3Q9H0R5 595 aa6.25□□□□□ -1.41
SMCHD1-206ENST00000581631 GZF1Q9H116 711 aaPredicted RBP6.25□□□□□ -1.41
SMCHD1-206ENST00000581631 PCDHB10Q9UN67 800 aa6.25□□□□□ -1.41
SMCHD1-206ENST00000581631 INVSQ9Y283 1065 aa6.25□□□□□ -1.41
SMCHD1-206ENST00000581631 SLC12A7Q9Y666 1083 aa6.25□□□□□ -1.41
SMCHD1-206ENST00000581631 TRBV23OR9-2A0A075B6M9 112 aa6.24□□□□□ -1.41
SMCHD1-206ENST00000581631 NPHP3-ACAD11A0A0J9YXS1 232 aa6.24□□□□□ -1.41
SMCHD1-206ENST00000581631 SGSM2O43147 1006 aa6.24□□□□□ -1.41
SMCHD1-206ENST00000581631 SMARCA5O60264 1052 aaPredicted RBP6.24□□□□□ -1.41
SMCHD1-206ENST00000581631 SOX9P48436 509 aa6.24□□□□□ -1.41
SMCHD1-206ENST00000581631 GIPRP48546 466 aa6.24□□□□□ -1.41
SMCHD1-206ENST00000581631 AMPD2Q01433 879 aa6.24□□□□□ -1.41
SMCHD1-206ENST00000581631 COL9A2Q14055 689 aaPredicted RBP6.24□□□□□ -1.41
SMCHD1-206ENST00000581631 C9orf131Q5VYM1 1079 aa6.24□□□□□ -1.41
SMCHD1-206ENST00000581631 HEATR6Q6AI08 1181 aaKnown RBP6.24□□□□□ -1.41
SMCHD1-206ENST00000581631 FAM26EQ8N5C1 309 aa6.24□□□□□ -1.41
SMCHD1-206ENST00000581631 SLC16A11Q8NCK7 471 aa6.24□□□□□ -1.41
SMCHD1-206ENST00000581631 MMP19Q99542 508 aa6.24□□□□□ -1.41
SMCHD1-206ENST00000581631 PCDH18Q9HCL0 1135 aa6.24□□□□□ -1.41
SMCHD1-206ENST00000581631 GINM1Q9NU53 330 aa6.24□□□□□ -1.41
SMCHD1-206ENST00000581631 DDX41Q9UJV9 622 aaKnown RBP6.24□□□□□ -1.41
SMCHD1-206ENST00000581631 NPHS1O60500 1241 aa6.23□□□□□ -1.41
SMCHD1-206ENST00000581631 ITGA1P56199 1179 aa6.23□□□□□ -1.41
SMCHD1-206ENST00000581631 CYP4F3Q08477 520 aa6.23□□□□□ -1.41
SMCHD1-206ENST00000581631 DCP2Q8IU60 420 aaKnown RBP6.23□□□□□ -1.41
SMCHD1-206ENST00000581631 LGI4Q8N135 537 aa6.23□□□□□ -1.41
SMCHD1-206ENST00000581631 Q8N1X5 172 aa6.23□□□□□ -1.41
SMCHD1-206ENST00000581631 LOXL4Q96JB6 756 aa6.23□□□□□ -1.41
SMCHD1-206ENST00000581631 BACH2Q9BYV9 841 aa6.23□□□□□ -1.41
SMCHD1-206ENST00000581631 MROH6A6NGR9 719 aa6.22□□□□□ -1.41
SMCHD1-206ENST00000581631 PPM1BO75688 479 aa6.22□□□□□ -1.41
SMCHD1-206ENST00000581631 FUCA1P04066 466 aa6.22□□□□□ -1.41
SMCHD1-206ENST00000581631 ZNF16P17020 682 aaPredicted RBP6.22□□□□□ -1.41
SMCHD1-206ENST00000581631 SLC7A5Q01650 507 aa6.22□□□□□ -1.41
SMCHD1-206ENST00000581631 ETV3LQ6ZN32 361 aa6.22□□□□□ -1.41
SMCHD1-206ENST00000581631 TXNDC5Q8NBS9 432 aaKnown RBP6.22□□□□□ -1.41
SMCHD1-206ENST00000581631 APEX2Q9UBZ4 518 aa6.22□□□□□ -1.41
SMCHD1-206ENST00000581631 KIAA2012Q0VF49 1180 aa6.21□□□□□ -1.42
SMCHD1-206ENST00000581631 Q8N1Y9 231 aa6.21□□□□□ -1.42
SMCHD1-206ENST00000581631 DVL3Q92997 716 aaPredicted RBP6.21□□□□□ -1.42
SMCHD1-206ENST00000581631 SCAND2PQ9GZW5 306 aaPredicted RBP6.21□□□□□ -1.42
SMCHD1-206ENST00000581631 CLEC1BQ9P126 229 aa6.21□□□□□ -1.42
SMCHD1-206ENST00000581631 SUV39H1O43463 412 aa6.2□□□□□ -1.42
SMCHD1-206ENST00000581631 PLS3P13797 630 aa6.2□□□□□ -1.42
SMCHD1-206ENST00000581631 ZNF28P17035 718 aa6.2□□□□□ -1.42
SMCHD1-206ENST00000581631 SLC6A11P48066 632 aa6.2□□□□□ -1.42
SMCHD1-206ENST00000581631 RBM10P98175 930 aaKnown RBP6.2□□□□□ -1.42
SMCHD1-206ENST00000581631 PAK2Q13177 524 aa6.2□□□□□ -1.42
SMCHD1-206ENST00000581631 ADAM9Q13443 819 aa6.2□□□□□ -1.42
SMCHD1-206ENST00000581631 INF2Q27J81 1249 aa6.2□□□□□ -1.42
SMCHD1-206ENST00000581631 MCTP2Q6DN12 878 aa6.2□□□□□ -1.42
SMCHD1-206ENST00000581631 ADAT2Q7Z6V5 191 aaKnown RBP6.2□□□□□ -1.42
SMCHD1-206ENST00000581631 FAM126BQ8IXS8 530 aa6.2□□□□□ -1.42
SMCHD1-206ENST00000581631 TTLL6Q8N841 843 aa6.2□□□□□ -1.42
SMCHD1-206ENST00000581631 RASGRP4Q8TDF6 673 aa6.2□□□□□ -1.42
SMCHD1-206ENST00000581631 USP33Q8TEY7 942 aa6.2□□□□□ -1.42
SMCHD1-206ENST00000581631 MBD6Q96DN6 1003 aa6.2□□□□□ -1.42
SMCHD1-206ENST00000581631 SORCS2Q96PQ0 1159 aa6.2□□□□□ -1.42
SMCHD1-206ENST00000581631 MARCH2Q9P0N8 246 aa6.2□□□□□ -1.42
SMCHD1-206ENST00000581631 PPP4R1LQ9P1A2 415 aa6.2□□□□□ -1.42
SMCHD1-206ENST00000581631 EMC9Q9Y3B6 208 aa6.2□□□□□ -1.42
SMCHD1-206ENST00000581631 B4GALT3O60512 393 aa6.19□□□□□ -1.42
SMCHD1-206ENST00000581631 EIF6P56537 245 aaKnown RBP6.19□□□□□ -1.42
SMCHD1-206ENST00000581631 CR1LQ2VPA4 569 aa6.19□□□□□ -1.42
SMCHD1-206ENST00000581631 LIMS2Q7Z4I7 341 aa6.19□□□□□ -1.42
SMCHD1-206ENST00000581631 STK32CQ86UX6 486 aa6.19□□□□□ -1.42
SMCHD1-206ENST00000581631 OR6P1Q8NGX9 317 aa6.19□□□□□ -1.42
SMCHD1-206ENST00000581631 SEC14L1Q92503 715 aa6.19□□□□□ -1.42
SMCHD1-206ENST00000581631 KRTAP9-8Q9BYQ0 159 aa6.19□□□□□ -1.42
SMCHD1-206ENST00000581631 CD248Q9HCU0 757 aa6.19□□□□□ -1.42
SMCHD1-206ENST00000581631 GPRC5CQ9NQ84 441 aa6.19□□□□□ -1.42
SMCHD1-206ENST00000581631 SRRDQ9UH36 339 aa6.19□□□□□ -1.42
SMCHD1-206ENST00000581631 ST6GALNAC2Q9UJ37 374 aa6.19□□□□□ -1.42
SMCHD1-206ENST00000581631 TSC22D4Q9Y3Q8 395 aa6.19□□□□□ -1.42
SMCHD1-206ENST00000581631 C9orf118A6NHY6 69 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms