RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 IWS1Q96ST2 819 aa18.31■□□□□ 0.52
CCDC57-213ENST00000581625 RMDN3Q96TC7 470 aa18.31■□□□□ 0.52
CCDC57-213ENST00000581625 EHMT1Q9H9B1 1298 aa18.31■□□□□ 0.52
CCDC57-213ENST00000581625 PXMP2Q9NR77 195 aa18.31■□□□□ 0.52
CCDC57-213ENST00000581625 INHAP05111 366 aa18.3■□□□□ 0.52
CCDC57-213ENST00000581625 EDNRBP24530 442 aa18.3■□□□□ 0.52
CCDC57-213ENST00000581625 CLK2P49760 499 aaKnown RBP18.3■□□□□ 0.52
CCDC57-213ENST00000581625 UBE2SQ16763 222 aa18.3■□□□□ 0.52
CCDC57-213ENST00000581625 ARHGEF16Q5VV41 709 aa18.3■□□□□ 0.52
CCDC57-213ENST00000581625 USP17L6PQ6QN14 398 aa18.3■□□□□ 0.52
CCDC57-213ENST00000581625 ARMCX2Q7L311 632 aa18.3■□□□□ 0.52
CCDC57-213ENST00000581625 FCHSD1Q86WN1 690 aa18.3■□□□□ 0.52
CCDC57-213ENST00000581625 MORC4Q8TE76 937 aa18.3■□□□□ 0.52
CCDC57-213ENST00000581625 ARMC5Q96C12 935 aa18.3■□□□□ 0.52
CCDC57-213ENST00000581625 INTS4Q96HW7 963 aaKnown RBP18.3■□□□□ 0.52
CCDC57-213ENST00000581625 PHF20Q9BVI0 1012 aa18.3■□□□□ 0.52
CCDC57-213ENST00000581625 PCDHA4Q9UN74 947 aa18.3■□□□□ 0.52
CCDC57-213ENST00000581625 SMC3Q9UQE7 1217 aa18.3■□□□□ 0.52
CCDC57-213ENST00000581625 CNPY2Q9Y2B0 182 aa18.3■□□□□ 0.52
CCDC57-213ENST00000581625 LRRC37A2A6NM11 1700 aa18.29■□□□□ 0.52
CCDC57-213ENST00000581625 CYP2C19P33261 490 aa18.29■□□□□ 0.52
CCDC57-213ENST00000581625 COL13A1Q5TAT6 717 aaPredicted RBP18.29■□□□□ 0.52
CCDC57-213ENST00000581625 MAP3K21Q5TCX8 1036 aa18.29■□□□□ 0.52
CCDC57-213ENST00000581625 SH3TC2Q8TF17 1288 aa18.29■□□□□ 0.52
CCDC57-213ENST00000581625 SHISA4Q96DD7 197 aa18.29■□□□□ 0.52
CCDC57-213ENST00000581625 PURBQ96QR8 312 aaKnown RBP18.29■□□□□ 0.52
CCDC57-213ENST00000581625 TAAR1Q96RJ0 339 aa18.29■□□□□ 0.52
CCDC57-213ENST00000581625 PDCD2LQ9BRP1 358 aa18.29■□□□□ 0.52
CCDC57-213ENST00000581625 BRMS1Q9HCU9 246 aa18.29■□□□□ 0.52
CCDC57-213ENST00000581625 BIN2Q9UBW5 565 aaPredicted RBP18.29■□□□□ 0.52
CCDC57-213ENST00000581625 RPTORQ8N122 1335 aa18.28■□□□□ 0.52
CCDC57-213ENST00000581625 PRKAR2AP13861 404 aaKnown RBP18.28■□□□□ 0.52
CCDC57-213ENST00000581625 PDE4DQ08499 809 aa18.28■□□□□ 0.52
CCDC57-213ENST00000581625 ZNF333Q96JL9 665 aa18.28■□□□□ 0.52
CCDC57-213ENST00000581625 ABHD16BQ9H3Z7 469 aa18.28■□□□□ 0.52
CCDC57-213ENST00000581625 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.28■□□□□ 0.52
CCDC57-213ENST00000581625 CYBAP13498 195 aa18.27■□□□□ 0.52
CCDC57-213ENST00000581625 EIF2AK2P19525 551 aaKnown RBP18.27■□□□□ 0.52
CCDC57-213ENST00000581625 CACNB2Q08289 660 aaPredicted RBP18.27■□□□□ 0.52
CCDC57-213ENST00000581625 PGM5Q15124 567 aa18.27■□□□□ 0.52
CCDC57-213ENST00000581625 XRRA1Q6P2D8 792 aa18.27■□□□□ 0.52
CCDC57-213ENST00000581625 BLIDQ8IZY5 108 aa18.27■□□□□ 0.52
CCDC57-213ENST00000581625 C8orf76Q96K31 380 aa18.27■□□□□ 0.52
CCDC57-213ENST00000581625 VTA1Q9NP79 307 aa18.27■□□□□ 0.52
CCDC57-213ENST00000581625 PCDHA6Q9UN73 950 aa18.27■□□□□ 0.52
CCDC57-213ENST00000581625 PCDHA8Q9Y5H6 950 aa18.27■□□□□ 0.52
CCDC57-213ENST00000581625 DTNBO60941 627 aa18.26■□□□□ 0.51
CCDC57-213ENST00000581625 STAM2O75886 525 aa18.26■□□□□ 0.51
CCDC57-213ENST00000581625 SNAI1O95863 264 aaPredicted RBP18.26■□□□□ 0.51
CCDC57-213ENST00000581625 MMP1P03956 469 aa18.26■□□□□ 0.51
CCDC57-213ENST00000581625 NR3C2P08235 984 aa18.26■□□□□ 0.51
CCDC57-213ENST00000581625 GJB2P29033 226 aa18.26■□□□□ 0.51
CCDC57-213ENST00000581625 CCND2P30279 289 aa18.26■□□□□ 0.51
CCDC57-213ENST00000581625 NPY5RQ15761 445 aa18.26■□□□□ 0.51
CCDC57-213ENST00000581625 STXBP2Q15833 593 aa18.26■□□□□ 0.51
CCDC57-213ENST00000581625 ANO3Q9BYT9 981 aa18.26■□□□□ 0.51
CCDC57-213ENST00000581625 HMX1Q9NP08 348 aaPredicted RBP18.26■□□□□ 0.51
CCDC57-213ENST00000581625 KCNJ14Q9UNX9 436 aa18.26■□□□□ 0.51
CCDC57-213ENST00000581625 HSP90AA1P07900 732 aaKnown RBP18.25■□□□□ 0.51
CCDC57-213ENST00000581625 KRT2P35908 639 aa18.25■□□□□ 0.51
CCDC57-213ENST00000581625 SREBF1P36956 1147 aa18.25■□□□□ 0.51
CCDC57-213ENST00000581625 TRIM32Q13049 653 aa18.25■□□□□ 0.51
CCDC57-213ENST00000581625 BECN1Q14457 450 aa18.25■□□□□ 0.51
CCDC57-213ENST00000581625 SAFBQ15424 915 aaKnown RBP eCLIP18.25■□□□□ 0.51
CCDC57-213ENST00000581625 PCNX4Q63HM2 1172 aa18.25■□□□□ 0.51
CCDC57-213ENST00000581625 KRT40Q6A162 431 aa18.25■□□□□ 0.51
CCDC57-213ENST00000581625 M0R2N6 131 aa18.24■□□□□ 0.51
CCDC57-213ENST00000581625 MSCO60682 206 aa18.24■□□□□ 0.51
CCDC57-213ENST00000581625 EIF3JO75822 258 aaKnown RBP18.24■□□□□ 0.51
CCDC57-213ENST00000581625 ACVR2BQ13705 512 aa18.24■□□□□ 0.51
CCDC57-213ENST00000581625 JAKMIP3Q5VZ66 844 aa18.24■□□□□ 0.51
CCDC57-213ENST00000581625 KRT25Q7Z3Z0 450 aa18.24■□□□□ 0.51
CCDC57-213ENST00000581625 FBXO18Q8NFZ0 1043 aa18.24■□□□□ 0.51
CCDC57-213ENST00000581625 KATNBL1Q9H079 304 aa18.24■□□□□ 0.51
CCDC57-213ENST00000581625 GJB4Q9NTQ9 266 aa18.24■□□□□ 0.51
CCDC57-213ENST00000581625 TMEM260Q9NX78 707 aa18.24■□□□□ 0.51
CCDC57-213ENST00000581625 ZHX1Q9UKY1 873 aaPredicted RBP18.24■□□□□ 0.51
CCDC57-213ENST00000581625 CENPFP49454 3210 aa18.24■□□□□ 0.51
CCDC57-213ENST00000581625 SEPT4O43236 478 aa18.23■□□□□ 0.51
CCDC57-213ENST00000581625 ZNF865P0CJ78 1059 aaPredicted RBP18.23■□□□□ 0.51
CCDC57-213ENST00000581625 AKR1A1P14550 325 aa18.23■□□□□ 0.51
CCDC57-213ENST00000581625 PDCP20941 246 aa18.23■□□□□ 0.51
CCDC57-213ENST00000581625 GNPTABQ3T906 1256 aa18.23■□□□□ 0.51
CCDC57-213ENST00000581625 VSIG10LQ86VR7 867 aa18.23■□□□□ 0.51
CCDC57-213ENST00000581625 FBXO16Q8IX29 292 aaPredicted RBP18.23■□□□□ 0.51
CCDC57-213ENST00000581625 DIS3L2Q8IYB7 885 aaKnown RBP18.23■□□□□ 0.51
CCDC57-213ENST00000581625 IL31RAQ8NI17 732 aa18.23■□□□□ 0.51
CCDC57-213ENST00000581625 RASGRP4Q8TDF6 673 aa18.23■□□□□ 0.51
CCDC57-213ENST00000581625 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.23■□□□□ 0.51
CCDC57-213ENST00000581625 MYCLP12524 364 aaPredicted RBP18.22■□□□□ 0.51
CCDC57-213ENST00000581625 CCL5P13501 91 aa18.22■□□□□ 0.51
CCDC57-213ENST00000581625 FOSBP53539 338 aa18.22■□□□□ 0.51
CCDC57-213ENST00000581625 ARHGAP4P98171 946 aa18.22■□□□□ 0.51
CCDC57-213ENST00000581625 NONOQ15233 471 aaKnown RBP eCLIP18.22■□□□□ 0.51
CCDC57-213ENST00000581625 TNS4Q8IZW8 715 aa18.22■□□□□ 0.51
CCDC57-213ENST00000581625 TRPV1Q8NER1 839 aa18.22■□□□□ 0.51
CCDC57-213ENST00000581625 PGBD1Q96JS3 809 aa18.22■□□□□ 0.51
CCDC57-213ENST00000581625 PAK6Q9NQU5 681 aaPredicted RBP18.22■□□□□ 0.51
CCDC57-213ENST00000581625 FAM184BQ9ULE4 1060 aa18.22■□□□□ 0.51
CCDC57-213ENST00000581625 MCM3APO60318 1980 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms