RNA–Protein interactions for RNA: ENST00000580824.5

CDC6-204, Transcript of cell division cycle 6, humanhuman

TSL 3

Gene CDC6, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-204ENST00000580824 NAPAP54920 295 aa17.72■□□□□ 0.43
CDC6-204ENST00000580824 TYW1BQ6NUM6 668 aa17.72■□□□□ 0.43
CDC6-204ENST00000580824 CCDC148Q8NFR7 591 aa17.72■□□□□ 0.43
CDC6-204ENST00000580824 CRISPLD2Q9H0B8 497 aa17.72■□□□□ 0.43
CDC6-204ENST00000580824 VTA1Q9NP79 307 aa17.72■□□□□ 0.43
CDC6-204ENST00000580824 RIC8AQ9NPQ8 531 aa17.72■□□□□ 0.43
CDC6-204ENST00000580824 LARGE1O95461 756 aa17.71■□□□□ 0.43
CDC6-204ENST00000580824 SGPL1O95470 568 aa17.71■□□□□ 0.43
CDC6-204ENST00000580824 CCND3P30281 292 aaPredicted RBP17.71■□□□□ 0.43
CDC6-204ENST00000580824 ACVR2BQ13705 512 aa17.71■□□□□ 0.43
CDC6-204ENST00000580824 U2AF1L4Q8WU68 220 aaKnown RBP17.71■□□□□ 0.43
CDC6-204ENST00000580824 PURBQ96QR8 312 aaKnown RBP17.71■□□□□ 0.43
CDC6-204ENST00000580824 TAAR1Q96RJ0 339 aa17.71■□□□□ 0.43
CDC6-204ENST00000580824 ZMYND12Q9H0C1 365 aa17.71■□□□□ 0.43
CDC6-204ENST00000580824 PXMP2Q9NR77 195 aa17.71■□□□□ 0.43
CDC6-204ENST00000580824 DDX20Q9UHI6 824 aaKnown RBP17.71■□□□□ 0.43
CDC6-204ENST00000580824 BRCA2P51587 3418 aa17.7■□□□□ 0.42
CDC6-204ENST00000580824 CTDNEP1O95476 244 aa17.7■□□□□ 0.42
CDC6-204ENST00000580824 AKR1A1P14550 325 aa17.7■□□□□ 0.42
CDC6-204ENST00000580824 HOXA13P31271 388 aaPredicted RBP17.7■□□□□ 0.42
CDC6-204ENST00000580824 ADCY7P51828 1080 aa17.7■□□□□ 0.42
CDC6-204ENST00000580824 LHX8Q68G74 356 aa17.7■□□□□ 0.42
CDC6-204ENST00000580824 MCTP2Q6DN12 878 aa17.7■□□□□ 0.42
CDC6-204ENST00000580824 NOL8Q76FK4 1167 aaKnown RBP17.7■□□□□ 0.42
CDC6-204ENST00000580824 SMARCC2Q8TAQ2 1214 aa17.7■□□□□ 0.42
CDC6-204ENST00000580824 DEFB118Q96PH6 123 aa17.7■□□□□ 0.42
CDC6-204ENST00000580824 LLPHQ9BRT6 129 aaKnown RBP17.7■□□□□ 0.42
CDC6-204ENST00000580824 KIAA1217Q5T5P2 1943 aa17.69■□□□□ 0.42
CDC6-204ENST00000580824 FOSP01100 380 aaPredicted RBP17.69■□□□□ 0.42
CDC6-204ENST00000580824 GNA11P29992 359 aa17.69■□□□□ 0.42
CDC6-204ENST00000580824 PDE4DQ08499 809 aa17.69■□□□□ 0.42
CDC6-204ENST00000580824 ARHGEF16Q5VV41 709 aa17.69■□□□□ 0.42
CDC6-204ENST00000580824 XRRA1Q6P2D8 792 aa17.69■□□□□ 0.42
CDC6-204ENST00000580824 USP17L6PQ6QN14 398 aa17.69■□□□□ 0.42
CDC6-204ENST00000580824 NECAB1Q8N987 351 aa17.69■□□□□ 0.42
CDC6-204ENST00000580824 ANKLE1Q8NAG6 615 aa17.69■□□□□ 0.42
CDC6-204ENST00000580824 NSUN7Q8NE18 718 aaKnown RBP17.69■□□□□ 0.42
CDC6-204ENST00000580824 WASF1Q92558 559 aa17.69■□□□□ 0.42
CDC6-204ENST00000580824 PDCD2LQ9BRP1 358 aa17.69■□□□□ 0.42
CDC6-204ENST00000580824 OGDHLQ9ULD0 1010 aa17.69■□□□□ 0.42
CDC6-204ENST00000580824 FAM184BQ9ULE4 1060 aa17.69■□□□□ 0.42
CDC6-204ENST00000580824 RBM47A0AV96 593 aaKnown RBP17.68■□□□□ 0.42
CDC6-204ENST00000580824 SMCO2A6NFE2 343 aa17.68■□□□□ 0.42
CDC6-204ENST00000580824 EIF3JO75822 258 aaKnown RBP17.68■□□□□ 0.42
CDC6-204ENST00000580824 STAM2O75886 525 aa17.68■□□□□ 0.42
CDC6-204ENST00000580824 MYCP01106 439 aaPredicted RBP17.68■□□□□ 0.42
CDC6-204ENST00000580824 NR3C2P08235 984 aa17.68■□□□□ 0.42
CDC6-204ENST00000580824 ST3GAL1Q11201 340 aa17.68■□□□□ 0.42
CDC6-204ENST00000580824 AP3B2Q13367 1082 aa17.68■□□□□ 0.42
CDC6-204ENST00000580824 STXBP2Q15833 593 aa17.68■□□□□ 0.42
CDC6-204ENST00000580824 PRAMEF19Q5SWL8 479 aa17.68■□□□□ 0.42
CDC6-204ENST00000580824 GALNT17Q6IS24 598 aa17.68■□□□□ 0.42
CDC6-204ENST00000580824 VSIG10LQ86VR7 867 aa17.68■□□□□ 0.42
CDC6-204ENST00000580824 BICD2Q8TD16 824 aa17.68■□□□□ 0.42
CDC6-204ENST00000580824 C6orf50Q9HD87 102 aa17.68■□□□□ 0.42
CDC6-204ENST00000580824 ZHX1Q9UKY1 873 aaPredicted RBP17.68■□□□□ 0.42
CDC6-204ENST00000580824 POTEFA5A3E0 1075 aa17.67■□□□□ 0.42
CDC6-204ENST00000580824 SPDYE3A6NKU9 549 aa17.67■□□□□ 0.42
CDC6-204ENST00000580824 EIF2AK2P19525 551 aaKnown RBP17.67■□□□□ 0.42
CDC6-204ENST00000580824 CNGA1P29973 690 aa17.67■□□□□ 0.42
CDC6-204ENST00000580824 CLK2P49760 499 aaKnown RBP17.67■□□□□ 0.42
CDC6-204ENST00000580824 PGM5Q15124 567 aa17.67■□□□□ 0.42
CDC6-204ENST00000580824 CCDC144BQ3MJ40 725 aa17.67■□□□□ 0.42
CDC6-204ENST00000580824 IQSEC1Q6DN90 963 aa17.67■□□□□ 0.42
CDC6-204ENST00000580824 TAPT1Q6NXT6 567 aa17.67■□□□□ 0.42
CDC6-204ENST00000580824 FCHSD1Q86WN1 690 aa17.67■□□□□ 0.42
CDC6-204ENST00000580824 SHISA4Q96DD7 197 aa17.67■□□□□ 0.42
CDC6-204ENST00000580824 EHMT1Q9H9B1 1298 aa17.67■□□□□ 0.42
CDC6-204ENST00000580824 DUSP11O75319 330 aaKnown RBP17.66■□□□□ 0.42
CDC6-204ENST00000580824 RARBP10826 455 aa17.66■□□□□ 0.42
CDC6-204ENST00000580824 XBP1P17861 261 aa17.66■□□□□ 0.42
CDC6-204ENST00000580824 CCND2P30279 289 aa17.66■□□□□ 0.42
CDC6-204ENST00000580824 NKX3-2P78367 333 aa17.66■□□□□ 0.42
CDC6-204ENST00000580824 PCNX4Q63HM2 1172 aa17.66■□□□□ 0.42
CDC6-204ENST00000580824 FBXO16Q8IX29 292 aaPredicted RBP17.66■□□□□ 0.42
CDC6-204ENST00000580824 DAGLBQ8NCG7 672 aa17.66■□□□□ 0.42
CDC6-204ENST00000580824 SCFD2Q8WU76 684 aa17.66■□□□□ 0.42
CDC6-204ENST00000580824 VPS54Q9P1Q0 977 aa17.66■□□□□ 0.42
CDC6-204ENST00000580824 ORC3Q9UBD5 711 aaPredicted RBP17.66■□□□□ 0.42
CDC6-204ENST00000580824 Q9Y3F1 56 aa17.66■□□□□ 0.42
CDC6-204ENST00000580824 NKRFO15226 690 aaKnown RBP eCLIP17.65■□□□□ 0.42
CDC6-204ENST00000580824 FDPSP14324 419 aaKnown RBP17.65■□□□□ 0.42
CDC6-204ENST00000580824 RGS19P49795 217 aa17.65■□□□□ 0.42
CDC6-204ENST00000580824 SOX10P56693 466 aa17.65■□□□□ 0.42
CDC6-204ENST00000580824 HMGN5P82970 282 aaKnown RBP17.65■□□□□ 0.42
CDC6-204ENST00000580824 REXO1Q8N1G1 1221 aaKnown RBP17.65■□□□□ 0.42
CDC6-204ENST00000580824 PPFIA3O75145 1194 aa17.64■□□□□ 0.41
CDC6-204ENST00000580824 CD2BP2O95400 341 aaKnown RBP17.64■□□□□ 0.41
CDC6-204ENST00000580824 TNFAIP2Q03169 654 aa17.64■□□□□ 0.41
CDC6-204ENST00000580824 UBE2SQ16763 222 aa17.64■□□□□ 0.41
CDC6-204ENST00000580824 DUSP28Q4G0W2 176 aa17.64■□□□□ 0.41
CDC6-204ENST00000580824 KCNV1Q6PIU1 500 aa17.64■□□□□ 0.41
CDC6-204ENST00000580824 CCDC83Q8IWF9 413 aa17.64■□□□□ 0.41
CDC6-204ENST00000580824 ARRDC4Q8NCT1 418 aa17.64■□□□□ 0.41
CDC6-204ENST00000580824 IL31RAQ8NI17 732 aa17.64■□□□□ 0.41
CDC6-204ENST00000580824 TMX3Q96JJ7 454 aa17.64■□□□□ 0.41
CDC6-204ENST00000580824 UPF3AQ9H1J1 476 aaKnown RBP17.64■□□□□ 0.41
CDC6-204ENST00000580824 PCDHA6Q9UN73 950 aa17.64■□□□□ 0.41
CDC6-204ENST00000580824 GNEQ9Y223 722 aaKnown RBP17.64■□□□□ 0.41
CDC6-204ENST00000580824 PCDHA8Q9Y5H6 950 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms