RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 PURAQ00577 322 aaKnown RBP12.75□□□□□ -0.37
TOP3A-210ENST00000580713 TKFCQ3LXA3 575 aa12.75□□□□□ -0.37
TOP3A-210ENST00000580713 BRDTQ58F21 947 aaPredicted RBP12.75□□□□□ -0.37
TOP3A-210ENST00000580713 SLFN13Q68D06 897 aa12.75□□□□□ -0.37
TOP3A-210ENST00000580713 ZNF444Q8N0Y2 327 aaPredicted RBP12.75□□□□□ -0.37
TOP3A-210ENST00000580713 OR6J1Q8NGC5 347 aa12.75□□□□□ -0.37
TOP3A-210ENST00000580713 TGS1Q96RS0 853 aaKnown RBP12.75□□□□□ -0.37
TOP3A-210ENST00000580713 WDR11Q9BZH6 1224 aa12.75□□□□□ -0.37
TOP3A-210ENST00000580713 SUGCTQ9HAC7 445 aa12.75□□□□□ -0.37
TOP3A-210ENST00000580713 METRNQ9UJH8 293 aa12.75□□□□□ -0.37
TOP3A-210ENST00000580713 CHGBP05060 677 aa12.74□□□□□ -0.37
TOP3A-210ENST00000580713 STAT2P52630 851 aa12.74□□□□□ -0.37
TOP3A-210ENST00000580713 WDR5P61964 334 aaKnown RBP12.74□□□□□ -0.37
TOP3A-210ENST00000580713 DUSP28Q4G0W2 176 aa12.74□□□□□ -0.37
TOP3A-210ENST00000580713 CEP85Q6P2H3 762 aa12.74□□□□□ -0.37
TOP3A-210ENST00000580713 NSMFQ6X4W1 530 aa12.74□□□□□ -0.37
TOP3A-210ENST00000580713 EP400NLQ6ZTU2 488 aa12.74□□□□□ -0.37
TOP3A-210ENST00000580713 CHURC1Q8WUH1 139 aa12.74□□□□□ -0.37
TOP3A-210ENST00000580713 RWDD1Q9H446 243 aaPredicted RBP12.74□□□□□ -0.37
TOP3A-210ENST00000580713 GRXCR2A6NFK2 248 aa12.73□□□□□ -0.37
TOP3A-210ENST00000580713 TTLL1O95922 423 aa12.73□□□□□ -0.37
TOP3A-210ENST00000580713 SNAP25P60880 206 aa12.73□□□□□ -0.37
TOP3A-210ENST00000580713 ERVK-21P61565 698 aa12.73□□□□□ -0.37
TOP3A-210ENST00000580713 UBE3CQ15386 1083 aa12.73□□□□□ -0.37
TOP3A-210ENST00000580713 PUS10Q3MIT2 529 aaKnown RBP12.73□□□□□ -0.37
TOP3A-210ENST00000580713 MUM1L1Q5H9M0 696 aa12.73□□□□□ -0.37
TOP3A-210ENST00000580713 FAM117BQ6P1L5 589 aa12.73□□□□□ -0.37
TOP3A-210ENST00000580713 FAM160B2Q86V87 743 aa12.73□□□□□ -0.37
TOP3A-210ENST00000580713 RPAP2Q8IXW5 612 aaPredicted RBP12.73□□□□□ -0.37
TOP3A-210ENST00000580713 CCDC155Q8N6L0 562 aa12.73□□□□□ -0.37
TOP3A-210ENST00000580713 GMCL1P1Q8NEA9 526 aa12.73□□□□□ -0.37
TOP3A-210ENST00000580713 CEP95Q96GE4 821 aa12.73□□□□□ -0.37
TOP3A-210ENST00000580713 PURBQ96QR8 312 aaKnown RBP12.73□□□□□ -0.37
TOP3A-210ENST00000580713 RAD9AQ99638 391 aa12.73□□□□□ -0.37
TOP3A-210ENST00000580713 RYDENQ9NUL5 291 aaKnown RBP12.73□□□□□ -0.37
TOP3A-210ENST00000580713 CYP39A1Q9NYL5 469 aa12.73□□□□□ -0.37
TOP3A-210ENST00000580713 RAD50Q92878 1312 aa12.72□□□□□ -0.37
TOP3A-210ENST00000580713 IGKV6D-41A0A0C4DH26 115 aa12.72□□□□□ -0.37
TOP3A-210ENST00000580713 H3BQ06 376 aaPredicted RBP12.72□□□□□ -0.37
TOP3A-210ENST00000580713 PRDM1O75626 825 aa12.72□□□□□ -0.37
TOP3A-210ENST00000580713 DEFB103AP81534 67 aa12.72□□□□□ -0.37
TOP3A-210ENST00000580713 HDAC1Q13547 482 aaPredicted RBP12.72□□□□□ -0.37
TOP3A-210ENST00000580713 LRRFIP1Q32MZ4 808 aaKnown RBP12.72□□□□□ -0.37
TOP3A-210ENST00000580713 SBK1Q52WX2 424 aa12.72□□□□□ -0.37
TOP3A-210ENST00000580713 ZSCAN25Q6NSZ9 544 aa12.72□□□□□ -0.37
TOP3A-210ENST00000580713 NFRKBQ6P4R8 1299 aa12.72□□□□□ -0.37
TOP3A-210ENST00000580713 CENPQQ7L2Z9 268 aaPredicted RBP12.72□□□□□ -0.37
TOP3A-210ENST00000580713 TET1Q8NFU7 2136 aa12.72□□□□□ -0.37
TOP3A-210ENST00000580713 STAG1Q8WVM7 1258 aa12.72□□□□□ -0.37
TOP3A-210ENST00000580713 MKL1Q969V6 931 aa12.72□□□□□ -0.37
TOP3A-210ENST00000580713 KIF1BPQ96EK5 621 aa12.72□□□□□ -0.37
TOP3A-210ENST00000580713 PUS7LQ9H0K6 701 aaKnown RBP12.72□□□□□ -0.37
TOP3A-210ENST00000580713 ZNF287Q9HBT7 754 aa12.72□□□□□ -0.37
TOP3A-210ENST00000580713 MTMR4Q9NYA4 1195 aa12.72□□□□□ -0.37
TOP3A-210ENST00000580713 COL4A4P53420 1690 aaPredicted RBP12.72□□□□□ -0.37
TOP3A-210ENST00000580713 LINC01553A4QN01 128 aa12.71□□□□□ -0.37
TOP3A-210ENST00000580713 KPNA6O60684 536 aa12.71□□□□□ -0.37
TOP3A-210ENST00000580713 IGHDP01880 384 aa12.71□□□□□ -0.37
TOP3A-210ENST00000580713 SLC1A4P43007 532 aa12.71□□□□□ -0.37
TOP3A-210ENST00000580713 PTPN11Q06124 597 aaPredicted RBP12.71□□□□□ -0.37
TOP3A-210ENST00000580713 PTGISQ16647 500 aa12.71□□□□□ -0.37
TOP3A-210ENST00000580713 FBXO22Q8NEZ5 403 aa12.71□□□□□ -0.37
TOP3A-210ENST00000580713 SLC39A7Q92504 469 aa12.71□□□□□ -0.37
TOP3A-210ENST00000580713 MFSD14AQ96MC6 490 aa12.71□□□□□ -0.37
TOP3A-210ENST00000580713 ADD3Q9UEY8 706 aaKnown RBP12.71□□□□□ -0.37
TOP3A-210ENST00000580713 CCPG1Q9ULG6 757 aa12.71□□□□□ -0.37
TOP3A-210ENST00000580713 SYNPO2Q9UMS6 1093 aa12.71□□□□□ -0.37
TOP3A-210ENST00000580713 FAM50BQ9Y247 325 aa12.71□□□□□ -0.37
TOP3A-210ENST00000580713 POTEB3A0JP26 581 aa12.7□□□□□ -0.38
TOP3A-210ENST00000580713 HMMRO75330 724 aa12.7□□□□□ -0.38
TOP3A-210ENST00000580713 GJB5O95377 273 aa12.7□□□□□ -0.38
TOP3A-210ENST00000580713 C7P10643 843 aa12.7□□□□□ -0.38
TOP3A-210ENST00000580713 MCCP23508 829 aa12.7□□□□□ -0.38
TOP3A-210ENST00000580713 ALDH5A1P51649 535 aaPredicted RBP12.7□□□□□ -0.38
TOP3A-210ENST00000580713 PPP2R5BQ15173 497 aa12.7□□□□□ -0.38
TOP3A-210ENST00000580713 CNKSR3Q6P9H4 555 aa12.7□□□□□ -0.38
TOP3A-210ENST00000580713 POTEBQ6S5H4 581 aa12.7□□□□□ -0.38
TOP3A-210ENST00000580713 HFE2Q6ZVN8 426 aa12.7□□□□□ -0.38
TOP3A-210ENST00000580713 CAGE1Q8TC20 777 aa12.7□□□□□ -0.38
TOP3A-210ENST00000580713 MORC4Q8TE76 937 aa12.7□□□□□ -0.38
TOP3A-210ENST00000580713 AFAP1L1Q8TED9 768 aa12.7□□□□□ -0.38
TOP3A-210ENST00000580713 ANKS1AQ92625 1134 aa12.7□□□□□ -0.38
TOP3A-210ENST00000580713 HAUS7Q99871 368 aa12.7□□□□□ -0.38
TOP3A-210ENST00000580713 UPF3BQ9BZI7 483 aaKnown RBP12.7□□□□□ -0.38
TOP3A-210ENST00000580713 CTNNA3Q9UI47 895 aa12.7□□□□□ -0.38
TOP3A-210ENST00000580713 MYH4Q9Y623 1939 aa12.7□□□□□ -0.38
TOP3A-210ENST00000580713 GREB1LQ9C091 1923 aaPredicted RBP12.69□□□□□ -0.38
TOP3A-210ENST00000580713 ABHD14A-ACY1A0A1B0GW23 586 aa12.69□□□□□ -0.38
TOP3A-210ENST00000580713 GSG1L2A8MUP6 293 aa12.69□□□□□ -0.38
TOP3A-210ENST00000580713 TSPY3P0CV98 308 aa12.69□□□□□ -0.38
TOP3A-210ENST00000580713 TSPY8P0CW00 308 aa12.69□□□□□ -0.38
TOP3A-210ENST00000580713 SELPP16109 830 aa12.69□□□□□ -0.38
TOP3A-210ENST00000580713 ATP5JP18859 108 aa12.69□□□□□ -0.38
TOP3A-210ENST00000580713 TDO2P48775 406 aa12.69□□□□□ -0.38
TOP3A-210ENST00000580713 BAATQ14032 418 aaPredicted RBP12.69□□□□□ -0.38
TOP3A-210ENST00000580713 PTPROQ16827 1216 aa12.69□□□□□ -0.38
TOP3A-210ENST00000580713 GIMAP6Q6P9H5 292 aa12.69□□□□□ -0.38
TOP3A-210ENST00000580713 KCTD1Q719H9 257 aa12.69□□□□□ -0.38
TOP3A-210ENST00000580713 LRRC8DQ7L1W4 858 aa12.69□□□□□ -0.38
TOP3A-210ENST00000580713 SIRT2Q8IXJ6 389 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms