RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 A0A1W2PPC1 479 aa11.41□□□□□ -0.58
GGA3-209ENST00000580646 ASB14A6NK59 587 aa11.41□□□□□ -0.58
GGA3-209ENST00000580646 NFIBO00712 420 aa11.41□□□□□ -0.58
GGA3-209ENST00000580646 ADAMTS4O75173 837 aa11.41□□□□□ -0.58
GGA3-209ENST00000580646 DUSP11O75319 330 aaKnown RBP11.41□□□□□ -0.58
GGA3-209ENST00000580646 ADD1P35611 737 aaKnown RBP11.41□□□□□ -0.58
GGA3-209ENST00000580646 MAGEA10P43363 369 aaPredicted RBP11.41□□□□□ -0.58
GGA3-209ENST00000580646 BAATQ14032 418 aaPredicted RBP11.41□□□□□ -0.58
GGA3-209ENST00000580646 PWP2Q15269 919 aaKnown RBP11.41□□□□□ -0.58
GGA3-209ENST00000580646 CCDC144BQ3MJ40 725 aa11.41□□□□□ -0.58
GGA3-209ENST00000580646 CPLX2Q6PUV4 134 aaKnown RBP11.41□□□□□ -0.58
GGA3-209ENST00000580646 MCF2L2Q86YR7 1114 aa11.41□□□□□ -0.58
GGA3-209ENST00000580646 RAB11FIP4Q86YS3 637 aa11.41□□□□□ -0.58
GGA3-209ENST00000580646 FAM177A1Q8N128 213 aaPredicted RBP11.41□□□□□ -0.58
GGA3-209ENST00000580646 KLHDC9Q8NEP7 349 aa11.41□□□□□ -0.58
GGA3-209ENST00000580646 GTF3C6Q969F1 213 aa11.41□□□□□ -0.58
GGA3-209ENST00000580646 ZSCAN31Q96LW9 406 aaPredicted RBP11.41□□□□□ -0.58
GGA3-209ENST00000580646 TSEN34Q9BSV6 310 aaKnown RBP11.41□□□□□ -0.58
GGA3-209ENST00000580646 KATNBL1Q9H079 304 aa11.41□□□□□ -0.58
GGA3-209ENST00000580646 SLKQ9H2G2 1235 aaPredicted RBP11.41□□□□□ -0.58
GGA3-209ENST00000580646 VAT1LQ9HCJ6 419 aa11.41□□□□□ -0.58
GGA3-209ENST00000580646 SH2B1Q9NRF2 756 aaPredicted RBP11.41□□□□□ -0.58
GGA3-209ENST00000580646 NAP1L2Q9ULW6 460 aaPredicted RBP11.41□□□□□ -0.58
GGA3-209ENST00000580646 ATP11BQ9Y2G3 1177 aa11.41□□□□□ -0.58
GGA3-209ENST00000580646 MRPL11Q9Y3B7 192 aaKnown RBP11.41□□□□□ -0.58
GGA3-209ENST00000580646 LRRC37A2A6NM11 1700 aa11.4□□□□□ -0.58
GGA3-209ENST00000580646 ASTN1O14525 1302 aa11.4□□□□□ -0.58
GGA3-209ENST00000580646 SYNRGQ9UMZ2 1314 aa11.4□□□□□ -0.58
GGA3-209ENST00000580646 ADCY6O43306 1168 aa11.4□□□□□ -0.58
GGA3-209ENST00000580646 PRPF3O43395 683 aaKnown RBP11.4□□□□□ -0.58
GGA3-209ENST00000580646 PPP1R11O60927 126 aaPredicted RBP11.4□□□□□ -0.58
GGA3-209ENST00000580646 CDKL5O76039 1030 aa11.4□□□□□ -0.58
GGA3-209ENST00000580646 SCRN1Q12765 414 aa11.4□□□□□ -0.58
GGA3-209ENST00000580646 SNX17Q15036 470 aa11.4□□□□□ -0.58
GGA3-209ENST00000580646 ME3Q16798 604 aa11.4□□□□□ -0.58
GGA3-209ENST00000580646 C1orf53Q5VUE5 145 aa11.4□□□□□ -0.58
GGA3-209ENST00000580646 PPP1R18Q6NYC8 613 aa11.4□□□□□ -0.58
GGA3-209ENST00000580646 HOMER1Q86YM7 354 aa11.4□□□□□ -0.58
GGA3-209ENST00000580646 CLEC4DQ8WXI8 215 aa11.4□□□□□ -0.58
GGA3-209ENST00000580646 PURBQ96QR8 312 aaKnown RBP11.4□□□□□ -0.58
GGA3-209ENST00000580646 SPC25Q9HBM1 224 aa11.4□□□□□ -0.58
GGA3-209ENST00000580646 PCDHA1Q9Y5I3 950 aa11.4□□□□□ -0.58
GGA3-209ENST00000580646 ALPK3Q96L96 1907 aa11.4□□□□□ -0.58
GGA3-209ENST00000580646 STK36Q9NRP7 1315 aa11.39□□□□□ -0.59
GGA3-209ENST00000580646 KIAA1217Q5T5P2 1943 aa11.39□□□□□ -0.59
GGA3-209ENST00000580646 A0A1W2PQ45 241 aaPredicted RBP11.39□□□□□ -0.59
GGA3-209ENST00000580646 A0A1W2PQY0 241 aa11.39□□□□□ -0.59
GGA3-209ENST00000580646 PTPDC1A2A3K4 754 aa11.39□□□□□ -0.59
GGA3-209ENST00000580646 CPLX1O14810 134 aa11.39□□□□□ -0.59
GGA3-209ENST00000580646 GJA9P57773 515 aa11.39□□□□□ -0.59
GGA3-209ENST00000580646 CCT2P78371 535 aaKnown RBP11.39□□□□□ -0.59
GGA3-209ENST00000580646 IRX5P78411 483 aaPredicted RBP11.39□□□□□ -0.59
GGA3-209ENST00000580646 MDM2Q00987 491 aaPredicted RBP11.39□□□□□ -0.59
GGA3-209ENST00000580646 TNFAIP2Q03169 654 aa11.39□□□□□ -0.59
GGA3-209ENST00000580646 KCNA10Q16322 511 aa11.39□□□□□ -0.59
GGA3-209ENST00000580646 PFKFB3Q16875 520 aaPredicted RBP11.39□□□□□ -0.59
GGA3-209ENST00000580646 USH1GQ495M9 461 aa11.39□□□□□ -0.59
GGA3-209ENST00000580646 TRIM60Q495X7 471 aa11.39□□□□□ -0.59
GGA3-209ENST00000580646 CCSAPQ6IQ19 270 aaPredicted RBP11.39□□□□□ -0.59
GGA3-209ENST00000580646 TRIM22Q8IYM9 498 aa11.39□□□□□ -0.59
GGA3-209ENST00000580646 CMTR1Q8N1G2 835 aaKnown RBP11.39□□□□□ -0.59
GGA3-209ENST00000580646 MORC4Q8TE76 937 aa11.39□□□□□ -0.59
GGA3-209ENST00000580646 UBE2OQ9C0C9 1292 aaKnown RBP11.39□□□□□ -0.59
GGA3-209ENST00000580646 UPF3AQ9H1J1 476 aaKnown RBP11.39□□□□□ -0.59
GGA3-209ENST00000580646 ADD3Q9UEY8 706 aaKnown RBP11.39□□□□□ -0.59
GGA3-209ENST00000580646 PRKAG2Q9UGJ0 569 aa11.39□□□□□ -0.59
GGA3-209ENST00000580646 DDX49Q9Y6V7 483 aaKnown RBP11.39□□□□□ -0.59
GGA3-209ENST00000580646 FRMPD3Q5JV73 1810 aa11.39□□□□□ -0.59
GGA3-209ENST00000580646 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.38□□□□□ -0.59
GGA3-209ENST00000580646 MYADML2A6NDP7 307 aa11.38□□□□□ -0.59
GGA3-209ENST00000580646 MOXD2PA6NHM9 499 aa11.38□□□□□ -0.59
GGA3-209ENST00000580646 PIK3CDO00329 1044 aa11.38□□□□□ -0.59
GGA3-209ENST00000580646 SOX1O00570 391 aaPredicted RBP11.38□□□□□ -0.59
GGA3-209ENST00000580646 C6orf222P0C671 652 aaPredicted RBP11.38□□□□□ -0.59
GGA3-209ENST00000580646 CALML3P27482 149 aa11.38□□□□□ -0.59
GGA3-209ENST00000580646 CST5P28325 142 aaPredicted RBP11.38□□□□□ -0.59
GGA3-209ENST00000580646 HSD17B4P51659 736 aa11.38□□□□□ -0.59
GGA3-209ENST00000580646 ACLYP53396 1101 aa11.38□□□□□ -0.59
GGA3-209ENST00000580646 RPS6P62753 249 aaKnown RBP11.38□□□□□ -0.59
GGA3-209ENST00000580646 AKAP17AQ02040 695 aaKnown RBP11.38□□□□□ -0.59
GGA3-209ENST00000580646 TLE2Q04725 743 aa11.38□□□□□ -0.59
GGA3-209ENST00000580646 IQSEC1Q6DN90 963 aa11.38□□□□□ -0.59
GGA3-209ENST00000580646 TAPT1Q6NXT6 567 aa11.38□□□□□ -0.59
GGA3-209ENST00000580646 RNF207Q6ZRF8 634 aa11.38□□□□□ -0.59
GGA3-209ENST00000580646 NOL8Q76FK4 1167 aaKnown RBP11.38□□□□□ -0.59
GGA3-209ENST00000580646 EEPD1Q7L9B9 569 aa11.38□□□□□ -0.59
GGA3-209ENST00000580646 CCDC82Q8N4S0 544 aa11.38□□□□□ -0.59
GGA3-209ENST00000580646 PCSK9Q8NBP7 692 aaKnown RBP11.38□□□□□ -0.59
GGA3-209ENST00000580646 LBHD1Q9BQE6 289 aaPredicted RBP11.38□□□□□ -0.59
GGA3-209ENST00000580646 LLPHQ9BRT6 129 aaKnown RBP11.38□□□□□ -0.59
GGA3-209ENST00000580646 GLT8D2Q9H1C3 349 aa11.38□□□□□ -0.59
GGA3-209ENST00000580646 NCOA5Q9HCD5 579 aaKnown RBP11.38□□□□□ -0.59
GGA3-209ENST00000580646 PDGFCQ9NRA1 345 aa11.38□□□□□ -0.59
GGA3-209ENST00000580646 BARHL2Q9NY43 387 aa11.38□□□□□ -0.59
GGA3-209ENST00000580646 V9GY48 417 aaPredicted RBP11.38□□□□□ -0.59
GGA3-209ENST00000580646 ESYT2A0FGR8 921 aa11.37□□□□□ -0.59
GGA3-209ENST00000580646 OPLAHO14841 1288 aa11.37□□□□□ -0.59
GGA3-209ENST00000580646 CTAGE5O15320 804 aa11.37□□□□□ -0.59
GGA3-209ENST00000580646 DEXIO95424 95 aa11.37□□□□□ -0.59
GGA3-209ENST00000580646 LARGE1O95461 756 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms