RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 NOL7Q9UMY1 257 aaKnown RBP16.31■□□□□ 0.2
SKA2-205ENST00000580541 STAM2O75886 525 aa16.3■□□□□ 0.2
SKA2-205ENST00000580541 HOXC6P09630 235 aa16.3■□□□□ 0.2
SKA2-205ENST00000580541 USP11P51784 963 aa16.3■□□□□ 0.2
SKA2-205ENST00000580541 UBE2SQ16763 222 aa16.3■□□□□ 0.2
SKA2-205ENST00000580541 SLC30A10Q6XR72 485 aa16.3■□□□□ 0.2
SKA2-205ENST00000580541 NOSTRINQ8IVI9 506 aa16.3■□□□□ 0.2
SKA2-205ENST00000580541 GJD2Q9UKL4 321 aa16.3■□□□□ 0.2
SKA2-205ENST00000580541 MTMR6Q9Y217 621 aa16.3■□□□□ 0.2
SKA2-205ENST00000580541 DOCK3Q8IZD9 2030 aa16.29■□□□□ 0.2
SKA2-205ENST00000580541 MGAMO43451 1857 aa16.29■□□□□ 0.2
SKA2-205ENST00000580541 M0R2N6 131 aa16.29■□□□□ 0.2
SKA2-205ENST00000580541 PGK2P07205 417 aa16.29■□□□□ 0.2
SKA2-205ENST00000580541 ZSCAN22P10073 491 aaPredicted RBP16.29■□□□□ 0.2
SKA2-205ENST00000580541 ZNF76P36508 570 aa16.29■□□□□ 0.2
SKA2-205ENST00000580541 TRAPPC10P48553 1259 aa16.29■□□□□ 0.2
SKA2-205ENST00000580541 NPY5RQ15761 445 aa16.29■□□□□ 0.2
SKA2-205ENST00000580541 STXBP2Q15833 593 aa16.29■□□□□ 0.2
SKA2-205ENST00000580541 ZNF792Q3KQV3 632 aa16.29■□□□□ 0.2
SKA2-205ENST00000580541 PIK3AP1Q6ZUJ8 805 aa16.29■□□□□ 0.2
SKA2-205ENST00000580541 TAAR1Q96RJ0 339 aa16.29■□□□□ 0.2
SKA2-205ENST00000580541 APBA2Q99767 749 aa16.29■□□□□ 0.2
SKA2-205ENST00000580541 ANO3Q9BYT9 981 aa16.29■□□□□ 0.2
SKA2-205ENST00000580541 PXMP2Q9NR77 195 aa16.29■□□□□ 0.2
SKA2-205ENST00000580541 SRRDQ9UH36 339 aa16.29■□□□□ 0.2
SKA2-205ENST00000580541 TSKSQ9UJT2 592 aa16.29■□□□□ 0.2
SKA2-205ENST00000580541 ECM2O94769 699 aaPredicted RBP16.28■□□□□ 0.2
SKA2-205ENST00000580541 HSPA1AP0DMV8 641 aaKnown RBP16.28■□□□□ 0.2
SKA2-205ENST00000580541 HSPA1BP0DMV9 641 aaKnown RBP16.28■□□□□ 0.2
SKA2-205ENST00000580541 CCND2P30279 289 aa16.28■□□□□ 0.2
SKA2-205ENST00000580541 SREBF1P36956 1147 aa16.28■□□□□ 0.2
SKA2-205ENST00000580541 FLT3LGP49771 235 aa16.28■□□□□ 0.2
SKA2-205ENST00000580541 ALDH5A1P51649 535 aaPredicted RBP16.28■□□□□ 0.2
SKA2-205ENST00000580541 CNTN2Q02246 1040 aa16.28■□□□□ 0.2
SKA2-205ENST00000580541 PDE4DQ08499 809 aa16.28■□□□□ 0.2
SKA2-205ENST00000580541 NR5A1Q13285 461 aa16.28■□□□□ 0.2
SKA2-205ENST00000580541 IRF5Q13568 498 aa16.28■□□□□ 0.2
SKA2-205ENST00000580541 RILPL1Q5EBL4 403 aa16.28■□□□□ 0.2
SKA2-205ENST00000580541 RAET1EQ8TD07 263 aa16.28■□□□□ 0.2
SKA2-205ENST00000580541 OXER1Q8TDS5 423 aa16.28■□□□□ 0.2
SKA2-205ENST00000580541 USP6NLQ92738 828 aa16.28■□□□□ 0.2
SKA2-205ENST00000580541 SHISA4Q96DD7 197 aa16.28■□□□□ 0.2
SKA2-205ENST00000580541 TMEM260Q9NX78 707 aa16.28■□□□□ 0.2
SKA2-205ENST00000580541 CHMP5Q9NZZ3 219 aa16.28■□□□□ 0.2
SKA2-205ENST00000580541 PLXNB2O15031 1838 aa16.28■□□□□ 0.2
SKA2-205ENST00000580541 COBLO75128 1261 aa16.27■□□□□ 0.2
SKA2-205ENST00000580541 EIF3JO75822 258 aaKnown RBP16.27■□□□□ 0.2
SKA2-205ENST00000580541 NR3C2P08235 984 aa16.27■□□□□ 0.2
SKA2-205ENST00000580541 CYP3A4P08684 503 aa16.27■□□□□ 0.2
SKA2-205ENST00000580541 GCFC2P16383 781 aaKnown RBP16.27■□□□□ 0.2
SKA2-205ENST00000580541 CYP2B6P20813 491 aa16.27■□□□□ 0.2
SKA2-205ENST00000580541 ARHGAP4P98171 946 aa16.27■□□□□ 0.2
SKA2-205ENST00000580541 PCNX4Q63HM2 1172 aa16.27■□□□□ 0.2
SKA2-205ENST00000580541 OLFML2BQ68BL8 750 aa16.27■□□□□ 0.2
SKA2-205ENST00000580541 MAMDC4Q6UXC1 1216 aa16.27■□□□□ 0.2
SKA2-205ENST00000580541 NEK8Q86SG6 692 aa16.27■□□□□ 0.2
SKA2-205ENST00000580541 RASGRP4Q8TDF6 673 aa16.27■□□□□ 0.2
SKA2-205ENST00000580541 TBCKQ8TEA7 893 aa16.27■□□□□ 0.2
SKA2-205ENST00000580541 MAML3Q96JK9 1138 aa16.27■□□□□ 0.2
SKA2-205ENST00000580541 PDCD2LQ9BRP1 358 aa16.27■□□□□ 0.2
SKA2-205ENST00000580541 ARHGAP39Q9C0H5 1083 aa16.27■□□□□ 0.2
SKA2-205ENST00000580541 RBBP6Q7Z6E9 1792 aaKnown RBP16.27■□□□□ 0.2
SKA2-205ENST00000580541 SYNGAP1Q96PV0 1343 aa16.26■□□□□ 0.19
SKA2-205ENST00000580541 SOWAHBA6NEL2 793 aa16.26■□□□□ 0.19
SKA2-205ENST00000580541 FOXN1O15353 648 aa16.26■□□□□ 0.19
SKA2-205ENST00000580541 MAFGO15525 162 aa16.26■□□□□ 0.19
SKA2-205ENST00000580541 BRD1O95696 1058 aa16.26■□□□□ 0.19
SKA2-205ENST00000580541 HSPA8P11142 646 aaKnown RBP16.26■□□□□ 0.19
SKA2-205ENST00000580541 MYCLP12524 364 aaPredicted RBP16.26■□□□□ 0.19
SKA2-205ENST00000580541 EIF2AK2P19525 551 aaKnown RBP16.26■□□□□ 0.19
SKA2-205ENST00000580541 ORC2Q13416 577 aaPredicted RBP16.26■□□□□ 0.19
SKA2-205ENST00000580541 PGM5Q15124 567 aa16.26■□□□□ 0.19
SKA2-205ENST00000580541 PKN2Q16513 984 aaKnown RBP16.26■□□□□ 0.19
SKA2-205ENST00000580541 GNPTABQ3T906 1256 aa16.26■□□□□ 0.19
SKA2-205ENST00000580541 MFSD14CQ5VZR4 134 aa16.26■□□□□ 0.19
SKA2-205ENST00000580541 ATL3Q6DD88 541 aa16.26■□□□□ 0.19
SKA2-205ENST00000580541 MOXD1Q6UVY6 613 aa16.26■□□□□ 0.19
SKA2-205ENST00000580541 NLRX1Q86UT6 975 aa16.26■□□□□ 0.19
SKA2-205ENST00000580541 VSIG10LQ86VR7 867 aa16.26■□□□□ 0.19
SKA2-205ENST00000580541 TNFRSF25Q93038 417 aa16.26■□□□□ 0.19
SKA2-205ENST00000580541 CDHR1Q96JP9 859 aa16.26■□□□□ 0.19
SKA2-205ENST00000580541 COL20A1Q9P218 1284 aa16.26■□□□□ 0.19
SKA2-205ENST00000580541 CNPY2Q9Y2B0 182 aa16.26■□□□□ 0.19
SKA2-205ENST00000580541 TRIM17Q9Y577 477 aa16.26■□□□□ 0.19
SKA2-205ENST00000580541 FRMPD4Q14CM0 1322 aa16.25■□□□□ 0.19
SKA2-205ENST00000580541 RPTORQ8N122 1335 aa16.25■□□□□ 0.19
SKA2-205ENST00000580541 ZNF236Q9UL36 1845 aa16.25■□□□□ 0.19
SKA2-205ENST00000580541 F13A1P00488 732 aa16.25■□□□□ 0.19
SKA2-205ENST00000580541 CTGFP29279 349 aa16.25■□□□□ 0.19
SKA2-205ENST00000580541 DDIT3P35638 169 aa16.25■□□□□ 0.19
SKA2-205ENST00000580541 PRKCZQ05513 592 aa16.25■□□□□ 0.19
SKA2-205ENST00000580541 INF2Q27J81 1249 aa16.25■□□□□ 0.19
SKA2-205ENST00000580541 KCNV1Q6PIU1 500 aa16.25■□□□□ 0.19
SKA2-205ENST00000580541 FERMT3Q86UX7 667 aa16.25■□□□□ 0.19
SKA2-205ENST00000580541 MORC4Q8TE76 937 aa16.25■□□□□ 0.19
SKA2-205ENST00000580541 PXYLP1Q8TE99 480 aa16.25■□□□□ 0.19
SKA2-205ENST00000580541 ZNF396Q96N95 335 aaPredicted RBP16.25■□□□□ 0.19
SKA2-205ENST00000580541 TINF2Q9BSI4 451 aa16.25■□□□□ 0.19
SKA2-205ENST00000580541 ABHD16BQ9H3Z7 469 aa16.25■□□□□ 0.19
SKA2-205ENST00000580541 NRBP1Q9UHY1 535 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms