RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 SEMA6BQ9H3T3 888 aa16.9■□□□□ 0.3
SMARCE1-216ENST00000580419 JMJD4Q9H9V9 463 aa16.9■□□□□ 0.3
SMARCE1-216ENST00000580419 CHD9Q3L8U1 2897 aa16.89■□□□□ 0.29
SMARCE1-216ENST00000580419 CYP21A2P08686 494 aa16.89■□□□□ 0.29
SMARCE1-216ENST00000580419 SMARCA1P28370 1054 aa16.89■□□□□ 0.29
SMARCE1-216ENST00000580419 HSD17B4P51659 736 aa16.89■□□□□ 0.29
SMARCE1-216ENST00000580419 SART3Q15020 963 aaKnown RBP16.89■□□□□ 0.29
SMARCE1-216ENST00000580419 TMEM240Q5SV17 173 aa16.89■□□□□ 0.29
SMARCE1-216ENST00000580419 SLC17A8Q8NDX2 589 aa16.89■□□□□ 0.29
SMARCE1-216ENST00000580419 MTG1Q9BT17 334 aaPredicted RBP16.89■□□□□ 0.29
SMARCE1-216ENST00000580419 NOC4LQ9BVI4 516 aaKnown RBP16.89■□□□□ 0.29
SMARCE1-216ENST00000580419 ALDH8A1Q9H2A2 487 aaPredicted RBP16.89■□□□□ 0.29
SMARCE1-216ENST00000580419 MTIF3Q9H2K0 278 aaKnown RBP16.89■□□□□ 0.29
SMARCE1-216ENST00000580419 RIOX1Q9H6W3 641 aa16.89■□□□□ 0.29
SMARCE1-216ENST00000580419 IL23AQ9NPF7 189 aa16.89■□□□□ 0.29
SMARCE1-216ENST00000580419 EYSQ5T1H1 3165 aa16.89■□□□□ 0.29
SMARCE1-216ENST00000580419 KLRF2D3W0D1 207 aa16.88■□□□□ 0.29
SMARCE1-216ENST00000580419 ZBTB5O15062 677 aa16.88■□□□□ 0.29
SMARCE1-216ENST00000580419 EIF3JO75822 258 aaKnown RBP16.88■□□□□ 0.29
SMARCE1-216ENST00000580419 STXBP2Q15833 593 aa16.88■□□□□ 0.29
SMARCE1-216ENST00000580419 KCNV1Q6PIU1 500 aa16.88■□□□□ 0.29
SMARCE1-216ENST00000580419 STOX1Q6ZVD7 989 aa16.88■□□□□ 0.29
SMARCE1-216ENST00000580419 C16orf59Q7L2K0 433 aa16.88■□□□□ 0.29
SMARCE1-216ENST00000580419 SESTD1Q86VW0 696 aa16.88■□□□□ 0.29
SMARCE1-216ENST00000580419 RPUSD2Q8IZ73 545 aaKnown RBP16.88■□□□□ 0.29
SMARCE1-216ENST00000580419 NCOA7Q8NI08 942 aa16.88■□□□□ 0.29
SMARCE1-216ENST00000580419 HERVK_113Q902F9 699 aa16.88■□□□□ 0.29
SMARCE1-216ENST00000580419 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.88■□□□□ 0.293e-7■■■□□ 15.4
SMARCE1-216ENST00000580419 HIPK3Q9H422 1215 aa16.88■□□□□ 0.29
SMARCE1-216ENST00000580419 GPHNQ9NQX3 736 aaPredicted RBP16.88■□□□□ 0.29
SMARCE1-216ENST00000580419 MAD2L2Q9UI95 211 aa16.88■□□□□ 0.29
SMARCE1-216ENST00000580419 ERICH2A1L162 156 aa16.87■□□□□ 0.29
SMARCE1-216ENST00000580419 PITPNM1O00562 1244 aa16.87■□□□□ 0.29
SMARCE1-216ENST00000580419 TXNP10599 105 aaKnown RBP16.87■□□□□ 0.29
SMARCE1-216ENST00000580419 TROAPQ12815 778 aa16.87■□□□□ 0.29
SMARCE1-216ENST00000580419 GRM4Q14833 912 aa16.87■□□□□ 0.29
SMARCE1-216ENST00000580419 USH1GQ495M9 461 aa16.87■□□□□ 0.29
SMARCE1-216ENST00000580419 OR6J1Q8NGC5 347 aa16.87■□□□□ 0.29
SMARCE1-216ENST00000580419 RMDN3Q96TC7 470 aa16.87■□□□□ 0.29
SMARCE1-216ENST00000580419 B4GALT4O60513 344 aa16.86■□□□□ 0.29
SMARCE1-216ENST00000580419 TGFB3P10600 412 aa16.86■□□□□ 0.29
SMARCE1-216ENST00000580419 CSF2RAP15509 400 aa16.86■□□□□ 0.29
SMARCE1-216ENST00000580419 RFC2P35250 354 aa16.86■□□□□ 0.29
SMARCE1-216ENST00000580419 TMEM63BQ5T3F8 832 aa16.86■□□□□ 0.29
SMARCE1-216ENST00000580419 CYB5R4Q7L1T6 521 aa16.86■□□□□ 0.29
SMARCE1-216ENST00000580419 RALYLQ86SE5 291 aaKnown RBP16.86■□□□□ 0.29
SMARCE1-216ENST00000580419 TMTC2Q8N394 836 aa16.86■□□□□ 0.29
SMARCE1-216ENST00000580419 TTYH1Q9H313 450 aaPredicted RBP16.86■□□□□ 0.29
SMARCE1-216ENST00000580419 CHD7Q9P2D1 2997 aa16.85■□□□□ 0.29
SMARCE1-216ENST00000580419 E7EWF7 191 aa16.85■□□□□ 0.29
SMARCE1-216ENST00000580419 OPLAHO14841 1288 aa16.85■□□□□ 0.29
SMARCE1-216ENST00000580419 GH1P01241 217 aa16.85■□□□□ 0.29
SMARCE1-216ENST00000580419 HOXD8P13378 290 aaPredicted RBP16.85■□□□□ 0.29
SMARCE1-216ENST00000580419 PTH1RQ03431 593 aa16.85■□□□□ 0.29
SMARCE1-216ENST00000580419 TEX2Q8IWB9 1127 aa16.85■□□□□ 0.29
SMARCE1-216ENST00000580419 STAG2Q8N3U4 1231 aa16.85■□□□□ 0.29
SMARCE1-216ENST00000580419 CDX2Q99626 313 aaPredicted RBP16.85■□□□□ 0.29
SMARCE1-216ENST00000580419 CPVLQ9H3G5 476 aa16.85■□□□□ 0.29
SMARCE1-216ENST00000580419 PXMP2Q9NR77 195 aa16.85■□□□□ 0.29
SMARCE1-216ENST00000580419 DDX49Q9Y6V7 483 aaKnown RBP16.85■□□□□ 0.29
SMARCE1-216ENST00000580419 MYH7BA7E2Y1 1941 aa16.85■□□□□ 0.29
SMARCE1-216ENST00000580419 NCOR1O75376 2440 aa16.85■□□□□ 0.29
SMARCE1-216ENST00000580419 TTC28Q96AY4 2481 aa16.84■□□□□ 0.29
SMARCE1-216ENST00000580419 PNMA6FA0A0J9YX94 578 aa16.84■□□□□ 0.29
SMARCE1-216ENST00000580419 IFIT3O14879 490 aaKnown RBP16.84■□□□□ 0.29
SMARCE1-216ENST00000580419 STAM2O75886 525 aa16.84■□□□□ 0.29
SMARCE1-216ENST00000580419 PARNO95453 639 aaKnown RBP16.84■□□□□ 0.29
SMARCE1-216ENST00000580419 FGBP02675 491 aa16.84■□□□□ 0.29
SMARCE1-216ENST00000580419 NR3C2P08235 984 aa16.84■□□□□ 0.29
SMARCE1-216ENST00000580419 DNAJB2P25686 324 aa16.84■□□□□ 0.29
SMARCE1-216ENST00000580419 CYP2C18P33260 490 aa16.84■□□□□ 0.29
SMARCE1-216ENST00000580419 RBL2Q08999 1139 aa16.84■□□□□ 0.29
SMARCE1-216ENST00000580419 WTAPQ15007 396 aa16.84■□□□□ 0.29
SMARCE1-216ENST00000580419 ZNF365Q70YC5 407 aa16.84■□□□□ 0.29
SMARCE1-216ENST00000580419 MB21D2Q8IYB1 491 aaPredicted RBP16.84■□□□□ 0.29
SMARCE1-216ENST00000580419 IGDCC4Q8TDY8 1250 aa16.84■□□□□ 0.29
SMARCE1-216ENST00000580419 TAAR1Q96RJ0 339 aa16.84■□□□□ 0.29
SMARCE1-216ENST00000580419 TRPV6Q9H1D0 765 aa16.84■□□□□ 0.29
SMARCE1-216ENST00000580419 COL20A1Q9P218 1284 aa16.84■□□□□ 0.29
SMARCE1-216ENST00000580419 PCDHA1Q9Y5I3 950 aa16.84■□□□□ 0.29
SMARCE1-216ENST00000580419 TRANK1O15050 2925 aa16.84■□□□□ 0.29
SMARCE1-216ENST00000580419 DHX16O60231 1041 aaKnown RBP16.83■□□□□ 0.28
SMARCE1-216ENST00000580419 ARHGAP1Q07960 439 aa16.83■□□□□ 0.28
SMARCE1-216ENST00000580419 LAMC2Q13753 1193 aa16.83■□□□□ 0.28
SMARCE1-216ENST00000580419 TRIP12Q14669 1992 aaPredicted RBP16.83■□□□□ 0.28
SMARCE1-216ENST00000580419 RAB30Q15771 203 aa16.83■□□□□ 0.28
SMARCE1-216ENST00000580419 ARHGEF16Q5VV41 709 aa16.83■□□□□ 0.28
SMARCE1-216ENST00000580419 CATIPQ7Z7H3 387 aa16.83■□□□□ 0.28
SMARCE1-216ENST00000580419 VSIG10LQ86VR7 867 aa16.83■□□□□ 0.28
SMARCE1-216ENST00000580419 TBC1D5Q92609 795 aa16.83■□□□□ 0.28
SMARCE1-216ENST00000580419 LZTS2Q9BRK4 669 aa16.83■□□□□ 0.28
SMARCE1-216ENST00000580419 SPZ1Q9BXG8 430 aa16.83■□□□□ 0.28
SMARCE1-216ENST00000580419 PPP1R12CQ9BZL4 782 aa16.83■□□□□ 0.28
SMARCE1-216ENST00000580419 DDX41Q9UJV9 622 aaKnown RBP16.83■□□□□ 0.28
SMARCE1-216ENST00000580419 TANC1Q9C0D5 1861 aa16.82■□□□□ 0.28
SMARCE1-216ENST00000580419 VCANP13611 3396 aa16.82■□□□□ 0.28
SMARCE1-216ENST00000580419 FRMPD4Q14CM0 1322 aa16.82■□□□□ 0.28
SMARCE1-216ENST00000580419 DDAH1O94760 285 aa16.82■□□□□ 0.28
SMARCE1-216ENST00000580419 ARIH2O95376 493 aa16.82■□□□□ 0.28
SMARCE1-216ENST00000580419 CASTP20810 708 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms