RNA–Protein interactions for RNA: ENST00000580299.1

CTC1-207, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 5

Gene CTC1, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-207ENST00000580299 COL28A1Q2UY09 1125 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 ZNF792Q3KQV3 632 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 CCDC144BQ3MJ40 725 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 AASDHQ4L235 1098 aaPredicted RBP2.96□□□□□ -1.94
CTC1-207ENST00000580299 BRDTQ58F21 947 aaPredicted RBP2.96□□□□□ -1.94
CTC1-207ENST00000580299 SPECC1Q5M775 1068 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 LAIR1Q6GTX8 287 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 CES5AQ6NT32 575 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 C19orf48Q6RUI8 117 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 POTEGQ6S5H5 508 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 ATF7IPQ6VMQ6 1270 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 PRR23CQ6ZRP0 262 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 SH3BP5LQ7L8J4 393 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 FBXO33Q7Z6M2 555 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 TLK2Q86UE8 772 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 MYOCDQ8IZQ8 938 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 FIBCD1Q8N539 461 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 SUSD6Q92537 303 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 RUNDC1Q96C34 613 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 VWCEQ96DN2 955 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 DDX11Q96FC9 970 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 UBL7Q96S82 380 aaPredicted RBP2.96□□□□□ -1.94
CTC1-207ENST00000580299 TANGO6Q9C0B7 1094 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 RPAP3Q9H6T3 665 aaPredicted RBP2.96□□□□□ -1.94
CTC1-207ENST00000580299 ERVK-5Q9HDB9 667 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 GPHNQ9NQX3 736 aaPredicted RBP2.96□□□□□ -1.94
CTC1-207ENST00000580299 RXFP3Q9NSD7 469 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 EMILIN3Q9NT22 766 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 TRMT13Q9NUP7 481 aaKnown RBP2.96□□□□□ -1.94
CTC1-207ENST00000580299 CLEC1BQ9P126 229 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 FBXO4Q9UKT5 387 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 ZBTB21Q9ULJ3 1066 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 BARX2Q9UMQ3 279 aaPredicted RBP2.96□□□□□ -1.94
CTC1-207ENST00000580299 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.96□□□□□ -1.94
CTC1-207ENST00000580299 C2CD3Q4AC94 2353 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 ABCA12Q86UK0 2595 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 WDFY3Q8IZQ1 3526 aa2.96□□□□□ -1.94
CTC1-207ENST00000580299 RAD50Q92878 1312 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 FNDC1Q4ZHG4 1894 aaPredicted RBP2.95□□□□□ -1.94
CTC1-207ENST00000580299 ITPR3Q14573 2671 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 C2orf16Q68DN1 1984 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 C5orf67F2Z3F1 127 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 SNPHO15079 494 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 GRM6O15303 877 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 TREHO43280 583 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 KCNK5O95279 499 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 PGK2P07205 417 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 ASGR2P07307 311 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 CSF1RP07333 972 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 RETP07949 1114 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 IFIT1P09914 478 aaKnown RBP2.95□□□□□ -1.94
CTC1-207ENST00000580299 SELPP16109 830 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 GTF2F1P35269 517 aaKnown RBP eCLIP2.95□□□□□ -1.94
CTC1-207ENST00000580299 MTHFRP42898 656 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 LIMK1P53667 647 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 PSMC6P62333 389 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 NKX3-2P78367 333 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 TNFAIP2Q03169 654 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 KCNC4Q03721 635 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 PTPN11Q06124 597 aaPredicted RBP2.95□□□□□ -1.94
CTC1-207ENST00000580299 ZNF252P-AS1Q0IIN9 211 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 TDGQ13569 410 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 NONOQ15233 471 aaKnown RBP eCLIP2.95□□□□□ -1.94
CTC1-207ENST00000580299 CSRP2Q16527 193 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 TPRNQ4KMQ1 711 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 CC2D1BQ5T0F9 858 aaKnown RBP2.95□□□□□ -1.94
CTC1-207ENST00000580299 MAMDC4Q6UXC1 1216 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 LRRC8DQ7L1W4 858 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 ZDHHC14Q8IZN3 488 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 MAGEB6Q8N7X4 407 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 C12orf50Q8NA57 414 aaPredicted RBP2.95□□□□□ -1.94
CTC1-207ENST00000580299 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.95□□□□□ -1.94
CTC1-207ENST00000580299 GATA6Q92908 595 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 ACSF2Q96CM8 615 aaPredicted RBP2.95□□□□□ -1.94
CTC1-207ENST00000580299 CDCA3Q99618 268 aaPredicted RBP2.95□□□□□ -1.94
CTC1-207ENST00000580299 NOL10Q9BSC4 688 aaKnown RBP2.95□□□□□ -1.94
CTC1-207ENST00000580299 MTG1Q9BT17 334 aaPredicted RBP2.95□□□□□ -1.94
CTC1-207ENST00000580299 MKNK1Q9BUB5 465 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 PLVAPQ9BX97 442 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 FAM126AQ9BYI3 521 aaPredicted RBP2.95□□□□□ -1.94
CTC1-207ENST00000580299 KIAA1683Q9H0B3 1180 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 DHX36Q9H2U1 1008 aaKnown RBP2.95□□□□□ -1.94
CTC1-207ENST00000580299 TLE6Q9H808 572 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 PARD6AQ9NPB6 346 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 GPR108Q9NPR9 543 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 SEMA4GQ9NTN9 838 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 GNL3LQ9NVN8 582 aaKnown RBP2.95□□□□□ -1.94
CTC1-207ENST00000580299 SPATA6Q9NWH7 488 aaPredicted RBP2.95□□□□□ -1.94
CTC1-207ENST00000580299 ZSCAN32Q9NX65 697 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.95□□□□□ -1.94
CTC1-207ENST00000580299 KCNK4Q9NYG8 393 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 PI4KBQ9UBF8 816 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 DUSP12Q9UNI6 340 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 MAP3K2Q9Y2U5 619 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 SIT1Q9Y3P8 196 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 GPSM3Q9Y4H4 160 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 KAT6AQ92794 2004 aa2.95□□□□□ -1.94
CTC1-207ENST00000580299 EMSYQ7Z589 1322 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 KIAA1217Q5T5P2 1943 aa2.94□□□□□ -1.94
CTC1-207ENST00000580299 NEURL1BA8MQ27 555 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms