RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 ARHGEF16Q5VV41 709 aa21.57■■□□□ 1.04
PPP4R1-215ENST00000580182 IQSEC1Q6DN90 963 aa21.57■■□□□ 1.04
PPP4R1-215ENST00000580182 CCSAPQ6IQ19 270 aaPredicted RBP21.57■■□□□ 1.04
PPP4R1-215ENST00000580182 FBXL16Q8N461 479 aa21.57■■□□□ 1.04
PPP4R1-215ENST00000580182 UPF3AQ9H1J1 476 aaKnown RBP21.57■■□□□ 1.04
PPP4R1-215ENST00000580182 PXMP2Q9NR77 195 aa21.57■■□□□ 1.04
PPP4R1-215ENST00000580182 PCDH10Q9P2E7 1040 aa21.57■■□□□ 1.04
PPP4R1-215ENST00000580182 PHF24Q9UPV7 400 aa21.57■■□□□ 1.04
PPP4R1-215ENST00000580182 DNAH12Q6ZR08 3092 aa21.56■■□□□ 1.04
PPP4R1-215ENST00000580182 RBM47A0AV96 593 aaKnown RBP21.56■■□□□ 1.04
PPP4R1-215ENST00000580182 METAP2P50579 478 aaKnown RBP eCLIP21.56■■□□□ 1.04
PPP4R1-215ENST00000580182 BEX3Q00994 111 aa21.56■■□□□ 1.04
PPP4R1-215ENST00000580182 KCNA10Q16322 511 aa21.56■■□□□ 1.04
PPP4R1-215ENST00000580182 FCHSD1Q86WN1 690 aa21.56■■□□□ 1.04
PPP4R1-215ENST00000580182 MPHOSPH6Q99547 160 aaKnown RBP21.56■■□□□ 1.04
PPP4R1-215ENST00000580182 LARP6Q9BRS8 491 aaKnown RBP21.56■■□□□ 1.04
PPP4R1-215ENST00000580182 WDR11Q9BZH6 1224 aa21.56■■□□□ 1.04
PPP4R1-215ENST00000580182 TM6SF1Q9BZW5 370 aa21.56■■□□□ 1.04
PPP4R1-215ENST00000580182 MAP3K20Q9NYL2 800 aaKnown RBP21.56■■□□□ 1.04
PPP4R1-215ENST00000580182 CYP46A1Q9Y6A2 500 aa21.56■■□□□ 1.04
PPP4R1-215ENST00000580182 DYNC1LI2O43237 492 aaPredicted RBP21.55■■□□□ 1.04
PPP4R1-215ENST00000580182 SLC39A5Q6ZMH5 540 aa21.55■■□□□ 1.04
PPP4R1-215ENST00000580182 TLK2Q86UE8 772 aa21.55■■□□□ 1.04
PPP4R1-215ENST00000580182 GPKOWQ92917 476 aaPredicted RBP eCLIP21.55■■□□□ 1.044e-7■■□□□ 11.4
PPP4R1-215ENST00000580182 NR2E3Q9Y5X4 410 aa21.55■■□□□ 1.04
PPP4R1-215ENST00000580182 A0A1W2PQ45 241 aaPredicted RBP21.54■■□□□ 1.04
PPP4R1-215ENST00000580182 A0A1W2PQY0 241 aa21.54■■□□□ 1.04
PPP4R1-215ENST00000580182 B4DLN1 442 aa21.54■■□□□ 1.04
PPP4R1-215ENST00000580182 NR3C2P08235 984 aa21.54■■□□□ 1.04
PPP4R1-215ENST00000580182 CST5P28325 142 aaPredicted RBP21.54■■□□□ 1.04
PPP4R1-215ENST00000580182 MRPL12P52815 198 aaKnown RBP21.54■■□□□ 1.04
PPP4R1-215ENST00000580182 ACLYP53396 1101 aa21.54■■□□□ 1.04
PPP4R1-215ENST00000580182 RCAN1P53805 252 aa21.54■■□□□ 1.04
PPP4R1-215ENST00000580182 DUSP28Q4G0W2 176 aa21.54■■□□□ 1.04
PPP4R1-215ENST00000580182 GNASQ5JWF2 1037 aa21.54■■□□□ 1.04
PPP4R1-215ENST00000580182 USP17L6PQ6QN14 398 aa21.54■■□□□ 1.04
PPP4R1-215ENST00000580182 SAMD3Q8N6K7 520 aa21.54■■□□□ 1.04
PPP4R1-215ENST00000580182 COPS5Q92905 334 aa21.54■■□□□ 1.04
PPP4R1-215ENST00000580182 ZFP91Q96JP5 570 aaPredicted RBP21.54■■□□□ 1.04
PPP4R1-215ENST00000580182 IWS1Q96ST2 819 aa21.54■■□□□ 1.04
PPP4R1-215ENST00000580182 PDCD2LQ9BRP1 358 aa21.54■■□□□ 1.04
PPP4R1-215ENST00000580182 TSEN34Q9BSV6 310 aaKnown RBP21.54■■□□□ 1.04
PPP4R1-215ENST00000580182 SPC25Q9HBM1 224 aa21.54■■□□□ 1.04
PPP4R1-215ENST00000580182 V9GY48 417 aaPredicted RBP21.54■■□□□ 1.04
PPP4R1-215ENST00000580182 ARIH2O95376 493 aa21.53■■□□□ 1.04
PPP4R1-215ENST00000580182 ASGR1P07306 291 aa21.53■■□□□ 1.04
PPP4R1-215ENST00000580182 MYCLP12524 364 aaPredicted RBP21.53■■□□□ 1.04
PPP4R1-215ENST00000580182 RTP1P59025 263 aa21.53■■□□□ 1.04
PPP4R1-215ENST00000580182 STXBP2Q15833 593 aa21.53■■□□□ 1.04
PPP4R1-215ENST00000580182 WWC2Q6AWC2 1192 aa21.53■■□□□ 1.04
PPP4R1-215ENST00000580182 SEPT14Q6ZU15 432 aa21.53■■□□□ 1.04
PPP4R1-215ENST00000580182 HEATR3Q7Z4Q2 680 aa21.53■■□□□ 1.04
PPP4R1-215ENST00000580182 IL31RAQ8NI17 732 aa21.53■■□□□ 1.04
PPP4R1-215ENST00000580182 ZMYND8Q9ULU4 1186 aaPredicted RBP21.53■■□□□ 1.04
PPP4R1-215ENST00000580182 NID2Q14112 1375 aa21.52■■□□□ 1.04
PPP4R1-215ENST00000580182 MEIS2O14770 477 aa21.52■■□□□ 1.04
PPP4R1-215ENST00000580182 SYN1P17600 705 aa21.52■■□□□ 1.04
PPP4R1-215ENST00000580182 PDIA3P30101 505 aaKnown RBP21.52■■□□□ 1.04
PPP4R1-215ENST00000580182 EVCP57679 992 aa21.52■■□□□ 1.04
PPP4R1-215ENST00000580182 NKX3-2P78367 333 aa21.52■■□□□ 1.04
PPP4R1-215ENST00000580182 CCT2P78371 535 aaKnown RBP21.52■■□□□ 1.04
PPP4R1-215ENST00000580182 PGM5Q15124 567 aa21.52■■□□□ 1.04
PPP4R1-215ENST00000580182 TYW1BQ6NUM6 668 aa21.52■■□□□ 1.04
PPP4R1-215ENST00000580182 AP5M1Q9H0R1 490 aa21.52■■□□□ 1.04
PPP4R1-215ENST00000580182 PDRG1Q9NUG6 133 aa21.52■■□□□ 1.04
PPP4R1-215ENST00000580182 ATP11BQ9Y2G3 1177 aa21.52■■□□□ 1.04
PPP4R1-215ENST00000580182 MOXD2PA6NHM9 499 aa21.51■■□□□ 1.03
PPP4R1-215ENST00000580182 PPFIA3O75145 1194 aa21.51■■□□□ 1.03
PPP4R1-215ENST00000580182 TXNP10599 105 aaKnown RBP21.51■■□□□ 1.03
PPP4R1-215ENST00000580182 FSCN1Q16658 493 aaKnown RBP21.51■■□□□ 1.03
PPP4R1-215ENST00000580182 TRIM60Q495X7 471 aa21.51■■□□□ 1.03
PPP4R1-215ENST00000580182 C8orf34Q49A92 452 aa21.51■■□□□ 1.03
PPP4R1-215ENST00000580182 SMARCC2Q8TAQ2 1214 aa21.51■■□□□ 1.03
PPP4R1-215ENST00000580182 SCFD2Q8WU76 684 aa21.51■■□□□ 1.03
PPP4R1-215ENST00000580182 NCOA5Q9HCD5 579 aaKnown RBP21.51■■□□□ 1.03
PPP4R1-215ENST00000580182 Q9Y3F1 56 aa21.51■■□□□ 1.03
PPP4R1-215ENST00000580182 EIF3JO75822 258 aaKnown RBP21.5■■□□□ 1.03
PPP4R1-215ENST00000580182 RGS20O76081 388 aa21.5■■□□□ 1.03
PPP4R1-215ENST00000580182 SNX17Q15036 470 aa21.5■■□□□ 1.03
PPP4R1-215ENST00000580182 PPP2R5BQ15173 497 aa21.5■■□□□ 1.03
PPP4R1-215ENST00000580182 UBE2SQ16763 222 aa21.5■■□□□ 1.03
PPP4R1-215ENST00000580182 LY6KQ17RY6 165 aa21.5■■□□□ 1.03
PPP4R1-215ENST00000580182 CCDC62Q6P9F0 684 aa21.5■■□□□ 1.03
PPP4R1-215ENST00000580182 VSIG10LQ86VR7 867 aa21.5■■□□□ 1.03
PPP4R1-215ENST00000580182 PCSK9Q8NBP7 692 aaKnown RBP21.5■■□□□ 1.03
PPP4R1-215ENST00000580182 PSTPIP2Q9H939 334 aa21.5■■□□□ 1.03
PPP4R1-215ENST00000580182 STARD7Q9NQZ5 370 aa21.5■■□□□ 1.03
PPP4R1-215ENST00000580182 CCDC196A0A1B0GTZ2 297 aa21.49■■□□□ 1.03
PPP4R1-215ENST00000580182 PIK3CDO00329 1044 aa21.49■■□□□ 1.03
PPP4R1-215ENST00000580182 ANAPC15P60006 121 aa21.49■■□□□ 1.03
PPP4R1-215ENST00000580182 TTLL4Q14679 1199 aa21.49■■□□□ 1.03
PPP4R1-215ENST00000580182 NTRK3Q16288 839 aa21.49■■□□□ 1.03
PPP4R1-215ENST00000580182 OR6J1Q8NGC5 347 aa21.49■■□□□ 1.03
PPP4R1-215ENST00000580182 CUL5Q93034 780 aa21.49■■□□□ 1.03
PPP4R1-215ENST00000580182 PHKBQ93100 1093 aa21.49■■□□□ 1.03
PPP4R1-215ENST00000580182 KIAA1217Q5T5P2 1943 aa21.49■■□□□ 1.03
PPP4R1-215ENST00000580182 STXBP3O00186 592 aa21.48■■□□□ 1.03
PPP4R1-215ENST00000580182 NAPAP54920 295 aa21.48■■□□□ 1.03
PPP4R1-215ENST00000580182 CXCL17Q6UXB2 119 aa21.48■■□□□ 1.03
PPP4R1-215ENST00000580182 GLT1D1Q96MS3 346 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms