RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 PITPNM1O00562 1244 aa15.65■□□□□ 0.1
TRAF4-214ENST00000580073 IGFBP4P22692 258 aa15.65■□□□□ 0.1
TRAF4-214ENST00000580073 BFSP2Q13515 415 aa15.65■□□□□ 0.1
TRAF4-214ENST00000580073 TTLL4Q14679 1199 aa15.65■□□□□ 0.1
TRAF4-214ENST00000580073 TTBK2Q6IQ55 1244 aa15.65■□□□□ 0.1
TRAF4-214ENST00000580073 RETREG2Q8NC44 543 aa15.65■□□□□ 0.1
TRAF4-214ENST00000580073 SLC9A7Q96T83 725 aa15.65■□□□□ 0.1
TRAF4-214ENST00000580073 TRPV6Q9H1D0 765 aa15.65■□□□□ 0.1
TRAF4-214ENST00000580073 WNT8AQ9H1J5 351 aa15.65■□□□□ 0.1
TRAF4-214ENST00000580073 NKX2-4Q9H2Z4 354 aa15.65■□□□□ 0.1
TRAF4-214ENST00000580073 VCANP13611 3396 aa15.65■□□□□ 0.1
TRAF4-214ENST00000580073 GRIN2DO15399 1336 aa15.65■□□□□ 0.1
TRAF4-214ENST00000580073 ABCB11O95342 1321 aa15.65■□□□□ 0.1
TRAF4-214ENST00000580073 UMODL1Q5DID0 1318 aa15.65■□□□□ 0.1
TRAF4-214ENST00000580073 PTPRSQ13332 1948 aa15.64■□□□□ 0.09
TRAF4-214ENST00000580073 TNFRSF10AO00220 468 aa15.64■□□□□ 0.09
TRAF4-214ENST00000580073 HIP1O00291 1037 aa15.64■□□□□ 0.09
TRAF4-214ENST00000580073 SNHG28P0DPA3 235 aa15.64■□□□□ 0.09
TRAF4-214ENST00000580073 ATP2A2P16615 1042 aaKnown RBP15.64■□□□□ 0.09
TRAF4-214ENST00000580073 SDSP20132 328 aa15.64■□□□□ 0.09
TRAF4-214ENST00000580073 RPS6P62753 249 aaKnown RBP15.64■□□□□ 0.09
TRAF4-214ENST00000580073 USP38Q8NB14 1042 aa15.64■□□□□ 0.09
TRAF4-214ENST00000580073 RGS22Q8NE09 1264 aa15.64■□□□□ 0.09
TRAF4-214ENST00000580073 RILPL2Q969X0 211 aa15.64■□□□□ 0.09
TRAF4-214ENST00000580073 FAM227BQ96M60 508 aa15.64■□□□□ 0.09
TRAF4-214ENST00000580073 INCENPQ9NQS7 918 aa15.64■□□□□ 0.09
TRAF4-214ENST00000580073 CXXC1Q9P0U4 656 aaPredicted RBP15.64■□□□□ 0.09
TRAF4-214ENST00000580073 ZNF213O14771 459 aa15.63■□□□□ 0.09
TRAF4-214ENST00000580073 GTPBP6O43824 516 aaPredicted RBP15.63■□□□□ 0.09
TRAF4-214ENST00000580073 EDNRBP24530 442 aa15.63■□□□□ 0.09
TRAF4-214ENST00000580073 HAND2P61296 217 aa15.63■□□□□ 0.09
TRAF4-214ENST00000580073 MRPS5P82675 430 aaKnown RBP15.63■□□□□ 0.09
TRAF4-214ENST00000580073 NMIQ13287 307 aaPredicted RBP15.63■□□□□ 0.09
TRAF4-214ENST00000580073 AAK1Q2M2I8 961 aa15.63■□□□□ 0.09
TRAF4-214ENST00000580073 DGKHQ86XP1 1220 aa15.63■□□□□ 0.09
TRAF4-214ENST00000580073 MCF2L2Q86YR7 1114 aa15.63■□□□□ 0.09
TRAF4-214ENST00000580073 CLEC4DQ8WXI8 215 aa15.63■□□□□ 0.09
TRAF4-214ENST00000580073 PPM1EQ8WY54 764 aa15.63■□□□□ 0.09
TRAF4-214ENST00000580073 SIP14410 1827 aa15.63■□□□□ 0.09
TRAF4-214ENST00000580073 A6NJR5 290 aa15.62■□□□□ 0.09
TRAF4-214ENST00000580073 BAIAP3O94812 1187 aa15.62■□□□□ 0.09
TRAF4-214ENST00000580073 PARNO95453 639 aaKnown RBP15.62■□□□□ 0.09
TRAF4-214ENST00000580073 TXNP10599 105 aaKnown RBP15.62■□□□□ 0.09
TRAF4-214ENST00000580073 ASPRV1Q53RT3 343 aa15.62■□□□□ 0.09
TRAF4-214ENST00000580073 TMEM67Q5HYA8 995 aa15.62■□□□□ 0.09
TRAF4-214ENST00000580073 CAGE1Q8TC20 777 aa15.62■□□□□ 0.09
TRAF4-214ENST00000580073 PHOSPHO2Q8TCD6 241 aa15.62■□□□□ 0.09
TRAF4-214ENST00000580073 SCLYQ96I15 445 aa15.62■□□□□ 0.09
TRAF4-214ENST00000580073 KAT14Q9H8E8 782 aa15.62■□□□□ 0.09
TRAF4-214ENST00000580073 DIAPH3Q9NSV4 1193 aa15.62■□□□□ 0.09
TRAF4-214ENST00000580073 TRMT13Q9NUP7 481 aaKnown RBP15.62■□□□□ 0.09
TRAF4-214ENST00000580073 KIF28PB7ZC32 967 aa15.61■□□□□ 0.09
TRAF4-214ENST00000580073 CDC37Q16543 378 aaPredicted RBP15.61■□□□□ 0.09
TRAF4-214ENST00000580073 NBPF20Q3BBV1 942 aa15.61■□□□□ 0.09
TRAF4-214ENST00000580073 USH1GQ495M9 461 aa15.61■□□□□ 0.09
TRAF4-214ENST00000580073 ZNF589Q86UQ0 364 aaPredicted RBP15.61■□□□□ 0.09
TRAF4-214ENST00000580073 TBC1D10CQ8IV04 446 aa15.61■□□□□ 0.09
TRAF4-214ENST00000580073 PNMA1Q8ND90 353 aa15.61■□□□□ 0.09
TRAF4-214ENST00000580073 NSUN6Q8TEA1 469 aaKnown RBP15.61■□□□□ 0.09
TRAF4-214ENST00000580073 ASB2Q96Q27 587 aa15.61■□□□□ 0.09
TRAF4-214ENST00000580073 PURBQ96QR8 312 aaKnown RBP15.61■□□□□ 0.09
TRAF4-214ENST00000580073 IWS1Q96ST2 819 aa15.61■□□□□ 0.09
TRAF4-214ENST00000580073 KATNAL1Q9BW62 490 aa15.61■□□□□ 0.09
TRAF4-214ENST00000580073 IL25Q9H293 177 aa15.61■□□□□ 0.09
TRAF4-214ENST00000580073 YBX2Q9Y2T7 364 aaKnown RBP15.61■□□□□ 0.09
TRAF4-214ENST00000580073 DDX49Q9Y6V7 483 aaKnown RBP15.61■□□□□ 0.09
TRAF4-214ENST00000580073 MICAL3Q7RTP6 2002 aa15.6■□□□□ 0.09
TRAF4-214ENST00000580073 DHX16O60231 1041 aaKnown RBP15.6■□□□□ 0.09
TRAF4-214ENST00000580073 GH1P01241 217 aa15.6■□□□□ 0.09
TRAF4-214ENST00000580073 CYP2C9P11712 490 aa15.6■□□□□ 0.09
TRAF4-214ENST00000580073 PTGS1P23219 599 aa15.6■□□□□ 0.09
TRAF4-214ENST00000580073 KCNJ6P48051 423 aa15.6■□□□□ 0.09
TRAF4-214ENST00000580073 DEFB128Q7Z7B8 93 aa15.6■□□□□ 0.09
TRAF4-214ENST00000580073 TET1Q8NFU7 2136 aa15.6■□□□□ 0.09
TRAF4-214ENST00000580073 AFAP1L1Q8TED9 768 aa15.6■□□□□ 0.09
TRAF4-214ENST00000580073 FTOQ9C0B1 505 aaKnown RBP eCLIP15.6■□□□□ 0.09
TRAF4-214ENST00000580073 CNNM2Q9H8M5 875 aa15.6■□□□□ 0.09
TRAF4-214ENST00000580073 CTNNA3Q9UI47 895 aa15.6■□□□□ 0.09
TRAF4-214ENST00000580073 NEDD4P46934 1319 aa15.6■□□□□ 0.09
TRAF4-214ENST00000580073 TCF20Q9UGU0 1960 aaKnown RBP15.6■□□□□ 0.09
TRAF4-214ENST00000580073 CASTP20810 708 aaKnown RBP15.59■□□□□ 0.09
TRAF4-214ENST00000580073 STXBP2Q15833 593 aa15.59■□□□□ 0.09
TRAF4-214ENST00000580073 IMMTQ16891 758 aaKnown RBP15.59■□□□□ 0.09
TRAF4-214ENST00000580073 SESTD1Q86VW0 696 aa15.59■□□□□ 0.09
TRAF4-214ENST00000580073 UBAC1Q9BSL1 405 aa15.59■□□□□ 0.09
TRAF4-214ENST00000580073 KRT23Q9C075 422 aa15.59■□□□□ 0.09
TRAF4-214ENST00000580073 MRPL11Q9Y3B7 192 aaKnown RBP15.59■□□□□ 0.09
TRAF4-214ENST00000580073 KAT6AQ92794 2004 aa15.58■□□□□ 0.09
TRAF4-214ENST00000580073 TTC28Q96AY4 2481 aa15.58■□□□□ 0.09
TRAF4-214ENST00000580073 PARP1P09874 1014 aaKnown RBP15.58■□□□□ 0.08
TRAF4-214ENST00000580073 RABGGTBP53611 331 aa15.58■□□□□ 0.08
TRAF4-214ENST00000580073 TRAF1Q13077 416 aa15.58■□□□□ 0.08
TRAF4-214ENST00000580073 ADGRE1Q14246 886 aa15.58■□□□□ 0.08
TRAF4-214ENST00000580073 CCDC85BQ15834 202 aaPredicted RBP15.58■□□□□ 0.08
TRAF4-214ENST00000580073 TMEM63BQ5T3F8 832 aa15.58■□□□□ 0.08
TRAF4-214ENST00000580073 MICALL1Q8N3F8 863 aa15.58■□□□□ 0.08
TRAF4-214ENST00000580073 ADAMTS19Q8TE59 1207 aa15.58■□□□□ 0.08
TRAF4-214ENST00000580073 UHRF1Q96T88 793 aaPredicted RBP15.58■□□□□ 0.08
TRAF4-214ENST00000580073 SPTBN5Q9NRC6 3674 aaKnown RBP15.57■□□□□ 0.08
TRAF4-214ENST00000580073 NCOR1O75376 2440 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms