RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 ZBED2Q9BTP6 218 aa14.43□□□□□ -0.1
CDK5RAP3-216ENST00000579853 TRIP12Q14669 1992 aaPredicted RBP14.42□□□□□ -0.1
CDK5RAP3-216ENST00000579853 PTPDC1A2A3K4 754 aa14.42□□□□□ -0.1
CDK5RAP3-216ENST00000579853 PRR33A8MZF0 331 aa14.42□□□□□ -0.1
CDK5RAP3-216ENST00000579853 LPXNO60711 386 aa14.42□□□□□ -0.1
CDK5RAP3-216ENST00000579853 EFCAB14O75071 495 aa14.42□□□□□ -0.1
CDK5RAP3-216ENST00000579853 PDE4DQ08499 809 aa14.42□□□□□ -0.1
CDK5RAP3-216ENST00000579853 DNERQ8NFT8 737 aa14.42□□□□□ -0.1
CDK5RAP3-216ENST00000579853 RANBP17Q9H2T7 1088 aaKnown RBP14.42□□□□□ -0.1
CDK5RAP3-216ENST00000579853 LCTP09848 1927 aa14.42□□□□□ -0.1
CDK5RAP3-216ENST00000579853 M0R2C6 588 aa14.41□□□□□ -0.1
CDK5RAP3-216ENST00000579853 SNAP25P60880 206 aa14.41□□□□□ -0.1
CDK5RAP3-216ENST00000579853 PTGISQ16647 500 aa14.41□□□□□ -0.1
CDK5RAP3-216ENST00000579853 CCDC96Q2M329 555 aa14.41□□□□□ -0.1
CDK5RAP3-216ENST00000579853 BTNL9Q6UXG8 535 aa14.41□□□□□ -0.1
CDK5RAP3-216ENST00000579853 PURBQ96QR8 312 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP3-216ENST00000579853 RAD9AQ99638 391 aa14.41□□□□□ -0.1
CDK5RAP3-216ENST00000579853 C11orf16Q9NQ32 467 aa14.41□□□□□ -0.1
CDK5RAP3-216ENST00000579853 SMARCA5O60264 1052 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP3-216ENST00000579853 ARHGEF15O94989 841 aa14.4□□□□□ -0.1
CDK5RAP3-216ENST00000579853 TXNP10599 105 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-216ENST00000579853 ALADP13716 330 aa14.4□□□□□ -0.1
CDK5RAP3-216ENST00000579853 SELPP16109 830 aa14.4□□□□□ -0.1
CDK5RAP3-216ENST00000579853 WDR5P61964 334 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-216ENST00000579853 CNKSR3Q6P9H4 555 aa14.4□□□□□ -0.1
CDK5RAP3-216ENST00000579853 RNF207Q6ZRF8 634 aa14.4□□□□□ -0.1
CDK5RAP3-216ENST00000579853 CHMP4CQ96CF2 233 aa14.4□□□□□ -0.1
CDK5RAP3-216ENST00000579853 TGS1Q96RS0 853 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-216ENST00000579853 MAF1Q9H063 256 aa14.4□□□□□ -0.1
CDK5RAP3-216ENST00000579853 UBE2ZQ9H832 354 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP3-216ENST00000579853 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.4□□□□□ -0.1
CDK5RAP3-216ENST00000579853 C5orf42Q9H799 3197 aa14.39□□□□□ -0.11
CDK5RAP3-216ENST00000579853 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP3-216ENST00000579853 ABHD14A-ACY1A0A1B0GW23 586 aa14.39□□□□□ -0.11
CDK5RAP3-216ENST00000579853 NFIBO00712 420 aa14.39□□□□□ -0.11
CDK5RAP3-216ENST00000579853 GJB5O95377 273 aa14.39□□□□□ -0.11
CDK5RAP3-216ENST00000579853 EDNRBP24530 442 aa14.39□□□□□ -0.11
CDK5RAP3-216ENST00000579853 CALML3P27482 149 aa14.39□□□□□ -0.11
CDK5RAP3-216ENST00000579853 NOVP48745 357 aa14.39□□□□□ -0.11
CDK5RAP3-216ENST00000579853 RBL2Q08999 1139 aa14.39□□□□□ -0.11
CDK5RAP3-216ENST00000579853 PUS10Q3MIT2 529 aaKnown RBP14.39□□□□□ -0.11
CDK5RAP3-216ENST00000579853 SYDE2Q5VT97 1194 aa14.39□□□□□ -0.11
CDK5RAP3-216ENST00000579853 SESTD1Q86VW0 696 aa14.39□□□□□ -0.11
CDK5RAP3-216ENST00000579853 FAM178BQ8IXR5 827 aa14.39□□□□□ -0.11
CDK5RAP3-216ENST00000579853 GJD3Q8N144 294 aa14.39□□□□□ -0.11
CDK5RAP3-216ENST00000579853 IL17RBQ9NRM6 502 aa14.39□□□□□ -0.11
CDK5RAP3-216ENST00000579853 CTNNA3Q9UI47 895 aa14.39□□□□□ -0.11
CDK5RAP3-216ENST00000579853 FAM86C2PA6NEL3 165 aa14.38□□□□□ -0.11
CDK5RAP3-216ENST00000579853 RANBP6O60518 1105 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-216ENST00000579853 ERVK-21P61565 698 aa14.38□□□□□ -0.11
CDK5RAP3-216ENST00000579853 LEXMQ3ZCV2 418 aa14.38□□□□□ -0.11
CDK5RAP3-216ENST00000579853 LRRC8DQ7L1W4 858 aa14.38□□□□□ -0.11
CDK5RAP3-216ENST00000579853 GDPD5Q8WTR4 605 aa14.38□□□□□ -0.11
CDK5RAP3-216ENST00000579853 KHSRPQ92945 711 aaKnown RBP eCLIP14.38□□□□□ -0.117e-7■□□□□ 9.1
CDK5RAP3-216ENST00000579853 CRBNQ96SW2 442 aa14.38□□□□□ -0.11
CDK5RAP3-216ENST00000579853 MTMR7Q9Y216 660 aa14.38□□□□□ -0.11
CDK5RAP3-216ENST00000579853 COL4A4P53420 1690 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-216ENST00000579853 WDR19Q8NEZ3 1342 aa14.38□□□□□ -0.11
CDK5RAP3-216ENST00000579853 LCHNA4D1U4 455 aa14.37□□□□□ -0.11
CDK5RAP3-216ENST00000579853 ORC4O43929 436 aa14.37□□□□□ -0.11
CDK5RAP3-216ENST00000579853 CXCL10P02778 98 aa14.37□□□□□ -0.11
CDK5RAP3-216ENST00000579853 RPS6P62753 249 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-216ENST00000579853 IKBKEQ14164 716 aa14.37□□□□□ -0.11
CDK5RAP3-216ENST00000579853 CSPP1Q1MSJ5 1256 aa14.37□□□□□ -0.11
CDK5RAP3-216ENST00000579853 ZMYM1Q5SVZ6 1142 aa14.37□□□□□ -0.11
CDK5RAP3-216ENST00000579853 SLC30A10Q6XR72 485 aa14.37□□□□□ -0.11
CDK5RAP3-216ENST00000579853 RGS22Q8NE09 1264 aa14.37□□□□□ -0.11
CDK5RAP3-216ENST00000579853 KCNH6Q9H252 994 aa14.37□□□□□ -0.11
CDK5RAP3-216ENST00000579853 SUGCTQ9HAC7 445 aa14.37□□□□□ -0.11
CDK5RAP3-216ENST00000579853 ANAPC4Q9UJX5 808 aa14.37□□□□□ -0.11
CDK5RAP3-216ENST00000579853 WDR87Q6ZQQ6 2873 aa14.37□□□□□ -0.11
CDK5RAP3-216ENST00000579853 TTC41PQ6P2S7 1318 aa14.37□□□□□ -0.11
CDK5RAP3-216ENST00000579853 NMT2O60551 498 aa14.36□□□□□ -0.11
CDK5RAP3-216ENST00000579853 GH1P01241 217 aa14.36□□□□□ -0.11
CDK5RAP3-216ENST00000579853 TOP1P11387 765 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-216ENST00000579853 CASTP20810 708 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-216ENST00000579853 SSTR3P32745 418 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP3-216ENST00000579853 SLC16A2P36021 539 aa14.36□□□□□ -0.11
CDK5RAP3-216ENST00000579853 CHMP4BP1P59074 171 aa14.36□□□□□ -0.11
CDK5RAP3-216ENST00000579853 TTBK2Q6IQ55 1244 aa14.36□□□□□ -0.11
CDK5RAP3-216ENST00000579853 CLEC4DQ8WXI8 215 aa14.36□□□□□ -0.11
CDK5RAP3-216ENST00000579853 COPS5Q92905 334 aa14.36□□□□□ -0.11
CDK5RAP3-216ENST00000579853 SEC62Q99442 399 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-216ENST00000579853 FSD1Q9BTV5 496 aa14.36□□□□□ -0.11
CDK5RAP3-216ENST00000579853 KATNAL1Q9BW62 490 aa14.36□□□□□ -0.11
CDK5RAP3-216ENST00000579853 DCTPP1Q9H773 170 aa14.36□□□□□ -0.11
CDK5RAP3-216ENST00000579853 CD320Q9NPF0 282 aa14.36□□□□□ -0.11
CDK5RAP3-216ENST00000579853 FAM50BQ9Y247 325 aa14.36□□□□□ -0.11
CDK5RAP3-216ENST00000579853 INSL6Q9Y581 213 aa14.36□□□□□ -0.11
CDK5RAP3-216ENST00000579853 PTPRSQ13332 1948 aa14.36□□□□□ -0.11
CDK5RAP3-216ENST00000579853 USP34Q70CQ2 3546 aa14.35□□□□□ -0.11
CDK5RAP3-216ENST00000579853 LINC01553A4QN01 128 aa14.35□□□□□ -0.11
CDK5RAP3-216ENST00000579853 MMP3P08254 477 aa14.35□□□□□ -0.11
CDK5RAP3-216ENST00000579853 KCNA5P22460 613 aa14.35□□□□□ -0.11
CDK5RAP3-216ENST00000579853 DEFB103AP81534 67 aa14.35□□□□□ -0.11
CDK5RAP3-216ENST00000579853 CTDSPL2Q05D32 466 aa14.35□□□□□ -0.11
CDK5RAP3-216ENST00000579853 DGKDQ16760 1214 aa14.35□□□□□ -0.11
CDK5RAP3-216ENST00000579853 PTPROQ16827 1216 aa14.35□□□□□ -0.11
CDK5RAP3-216ENST00000579853 TSHZ3Q63HK5 1081 aa14.35□□□□□ -0.11
CDK5RAP3-216ENST00000579853 GDF6Q6KF10 455 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms