RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 TNNQ9UQP3 1299 aa8.6□□□□□ -1.03
CDK5RAP3-209ENST00000578663 CTDP1Q9Y5B0 961 aaPredicted RBP8.6□□□□□ -1.03
CDK5RAP3-209ENST00000578663 ZNF532Q9HCE3 1301 aa8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 TRIP12Q14669 1992 aaPredicted RBP8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 ITPR1Q14643 2758 aa8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 LOC102724159A0A0B4J2E5 919 aa8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 USP17L12C9JPN9 530 aa8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 USP17L21D6R901 530 aa8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 F5H6K3 240 aa8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 IPO8O15397 1037 aaKnown RBP8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 DYNC1LI2O43237 492 aaPredicted RBP8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 PARNO95453 639 aaKnown RBP8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 IQCF3P0C7M6 154 aa8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 CYP2C9P11712 490 aa8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 SMPD1P17405 629 aa8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 PSMC6P62333 389 aa8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 PURAQ00577 322 aaKnown RBP8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 CNTN2Q02246 1040 aa8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 PTPN11Q06124 597 aaPredicted RBP8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 KLRC3Q07444 240 aa8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 BFSP2Q13515 415 aa8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 COL9A3Q14050 684 aaPredicted RBP8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 PWP2Q15269 919 aaKnown RBP8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 NBPF20Q3BBV1 942 aa8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 TKFCQ3LXA3 575 aa8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 NFRKBQ6P4R8 1299 aa8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 RPAP2Q8IXW5 612 aaPredicted RBP8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 CPXCR1Q8N123 301 aa8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 RETREG2Q8NC44 543 aa8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 MORC4Q8TE76 937 aa8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 DDRGK1Q96HY6 314 aa8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 TGS1Q96RS0 853 aaKnown RBP8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 RAVER2Q9HCJ3 691 aaKnown RBP8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 TRMT13Q9NUP7 481 aaKnown RBP8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 FEM1BQ9UK73 627 aa8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 IGF2RP11717 2491 aa8.59□□□□□ -1.03
CDK5RAP3-209ENST00000578663 STXBP3O00186 592 aa8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 RAD21O60216 631 aa8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 EFCAB14O75071 495 aa8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 GJB5O95377 273 aa8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 TRIM27P14373 513 aa8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 CPT1AP50416 773 aa8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 ATXN1P54253 815 aaKnown RBP8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 WDR5P61964 334 aaKnown RBP8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 ATP8B2P98198 1209 aa8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 RBL2Q08999 1139 aa8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 DUSP28Q4G0W2 176 aa8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 TIGD5Q53EQ6 642 aa8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 TAPT1Q6NXT6 567 aa8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 ERC1Q8IUD2 1116 aa8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 CCDC155Q8N6L0 562 aa8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 CAGE1Q8TC20 777 aa8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 AFAP1L1Q8TED9 768 aa8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 FRAT1Q92837 279 aaPredicted RBP8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 NUP88Q99567 741 aaPredicted RBP8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 RAD9AQ99638 391 aa8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 MTG1Q9BT17 334 aaPredicted RBP8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 FTOQ9C0B1 505 aaKnown RBP eCLIP8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 A1CFQ9NQ94 594 aaKnown RBP8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 CTNNA3Q9UI47 895 aa8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 MTUS1Q9ULD2 1270 aa8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 COG6Q9Y2V7 657 aa8.58□□□□□ -1.04
CDK5RAP3-209ENST00000578663 RAD50Q92878 1312 aa8.57□□□□□ -1.04
CDK5RAP3-209ENST00000578663 MYH4Q9Y623 1939 aa8.57□□□□□ -1.04
CDK5RAP3-209ENST00000578663 LINC01553A4QN01 128 aa8.57□□□□□ -1.04
CDK5RAP3-209ENST00000578663 LOC730098B7Z3J9 87 aa8.57□□□□□ -1.04
CDK5RAP3-209ENST00000578663 KPNA6O60684 536 aa8.57□□□□□ -1.04
CDK5RAP3-209ENST00000578663 MBD4O95243 580 aa8.57□□□□□ -1.04
CDK5RAP3-209ENST00000578663 DLX2Q07687 328 aaPredicted RBP8.57□□□□□ -1.04
CDK5RAP3-209ENST00000578663 CLUL1Q15846 466 aa8.57□□□□□ -1.04
CDK5RAP3-209ENST00000578663 BRDTQ58F21 947 aaPredicted RBP8.57□□□□□ -1.04
CDK5RAP3-209ENST00000578663 KIAA0319Q5VV43 1072 aa8.57□□□□□ -1.04
CDK5RAP3-209ENST00000578663 FBXO16Q8IX29 292 aaPredicted RBP8.57□□□□□ -1.04
CDK5RAP3-209ENST00000578663 CRIPAKQ8N1N5 446 aa8.57□□□□□ -1.04
CDK5RAP3-209ENST00000578663 GMCL1P1Q8NEA9 526 aa8.57□□□□□ -1.04
CDK5RAP3-209ENST00000578663 KIFC2Q96AC6 838 aa8.57□□□□□ -1.04
CDK5RAP3-209ENST00000578663 MRPL38Q96DV4 380 aaKnown RBP8.57□□□□□ -1.04
CDK5RAP3-209ENST00000578663 ARMT1Q9H993 441 aa8.57□□□□□ -1.04
CDK5RAP3-209ENST00000578663 RNF146Q9NTX7 359 aa8.57□□□□□ -1.04
CDK5RAP3-209ENST00000578663 ARPP21Q9UBL0 812 aaPredicted RBP8.57□□□□□ -1.04
CDK5RAP3-209ENST00000578663 PCDHGC5Q9Y5F6 944 aa8.57□□□□□ -1.04
CDK5RAP3-209ENST00000578663 LCTP09848 1927 aa8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 IGSF10Q6WRI0 2623 aa8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 CYP2D7A0A087X1C5 515 aa8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 IGKV6D-41A0A0C4DH26 115 aa8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 ABHD14A-ACY1A0A1B0GW23 586 aa8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 NKRFO15226 690 aaKnown RBP eCLIP8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 PRKAB2O43741 272 aa8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 CXCL10P02778 98 aa8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 RASA1P20936 1047 aa8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 ADD2P35612 726 aa8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 SLC4A3P48751 1232 aa8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 CBX2Q14781 532 aaPredicted RBP8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 PTPROQ16827 1216 aa8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 TCEAL5Q5H9L2 206 aa8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 ZKSCAN2Q63HK3 967 aa8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 CNKSR3Q6P9H4 555 aa8.56□□□□□ -1.04
CDK5RAP3-209ENST00000578663 AACSQ86V21 672 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms