RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 DYNC1LI2O43237 492 aaPredicted RBP13.42□□□□□ -0.26
GGA3-204ENST00000578208 ADCY6O43306 1168 aa13.42□□□□□ -0.26
GGA3-204ENST00000578208 ASGR1P07306 291 aa13.42□□□□□ -0.26
GGA3-204ENST00000578208 SMPD1P17405 629 aa13.42□□□□□ -0.26
GGA3-204ENST00000578208 EIF2AK2P19525 551 aaKnown RBP13.42□□□□□ -0.26
GGA3-204ENST00000578208 RPS6KB1P23443 525 aa13.42□□□□□ -0.26
GGA3-204ENST00000578208 ACLYP53396 1101 aa13.42□□□□□ -0.26
GGA3-204ENST00000578208 RCAN1P53805 252 aa13.42□□□□□ -0.26
GGA3-204ENST00000578208 TTLL4Q14679 1199 aa13.42□□□□□ -0.26
GGA3-204ENST00000578208 KCNA10Q16322 511 aa13.42□□□□□ -0.26
GGA3-204ENST00000578208 FSCN1Q16658 493 aaKnown RBP13.42□□□□□ -0.26
GGA3-204ENST00000578208 DUSP28Q4G0W2 176 aa13.42□□□□□ -0.26
GGA3-204ENST00000578208 BRDTQ58F21 947 aaPredicted RBP13.42□□□□□ -0.26
GGA3-204ENST00000578208 CCDC82Q8N4S0 544 aa13.42□□□□□ -0.26
GGA3-204ENST00000578208 SRBD1Q8N5C6 995 aaKnown RBP13.42□□□□□ -0.26
GGA3-204ENST00000578208 COL20A1Q9P218 1284 aa13.42□□□□□ -0.26
GGA3-204ENST00000578208 GNEQ9Y223 722 aaKnown RBP13.42□□□□□ -0.26
GGA3-204ENST00000578208 Q9Y3F1 56 aa13.42□□□□□ -0.26
GGA3-204ENST00000578208 ALPK3Q96L96 1907 aa13.42□□□□□ -0.26
GGA3-204ENST00000578208 MKI67P46013 3256 aaKnown RBP13.42□□□□□ -0.26
GGA3-204ENST00000578208 CCDC196A0A1B0GTZ2 297 aa13.41□□□□□ -0.26
GGA3-204ENST00000578208 MYADML2A6NDP7 307 aa13.41□□□□□ -0.26
GGA3-204ENST00000578208 OPLAHO14841 1288 aa13.41□□□□□ -0.26
GGA3-204ENST00000578208 CPA1P15085 419 aa13.41□□□□□ -0.26
GGA3-204ENST00000578208 SYN1P17600 705 aa13.41□□□□□ -0.26
GGA3-204ENST00000578208 HOXA13P31271 388 aaPredicted RBP13.41□□□□□ -0.26
GGA3-204ENST00000578208 METAP2P50579 478 aaKnown RBP eCLIP13.41□□□□□ -0.26
GGA3-204ENST00000578208 GHRHRQ02643 423 aa13.41□□□□□ -0.26
GGA3-204ENST00000578208 CHRDL2Q6WN34 429 aa13.41□□□□□ -0.26
GGA3-204ENST00000578208 CMTR1Q8N1G2 835 aaKnown RBP13.41□□□□□ -0.26
GGA3-204ENST00000578208 SMARCC2Q8TAQ2 1214 aa13.41□□□□□ -0.26
GGA3-204ENST00000578208 BRF1Q92994 677 aa13.41□□□□□ -0.26
GGA3-204ENST00000578208 USP26Q9BXU7 913 aa13.41□□□□□ -0.26
GGA3-204ENST00000578208 PXMP2Q9NR77 195 aa13.41□□□□□ -0.26
GGA3-204ENST00000578208 BRPF3Q9ULD4 1205 aa13.41□□□□□ -0.26
GGA3-204ENST00000578208 MROH7Q68CQ1 1323 aa13.4□□□□□ -0.26
GGA3-204ENST00000578208 A0A0U1RQG5 324 aaPredicted RBP13.4□□□□□ -0.26
GGA3-204ENST00000578208 RBM47A0AV96 593 aaKnown RBP13.4□□□□□ -0.26
GGA3-204ENST00000578208 CABYRO75952 493 aa13.4□□□□□ -0.26
GGA3-204ENST00000578208 NR3C2P08235 984 aa13.4□□□□□ -0.26
GGA3-204ENST00000578208 TXNP10599 105 aaKnown RBP13.4□□□□□ -0.26
GGA3-204ENST00000578208 CCND2P30279 289 aa13.4□□□□□ -0.26
GGA3-204ENST00000578208 CPT1AP50416 773 aa13.4□□□□□ -0.26
GGA3-204ENST00000578208 BEX3Q00994 111 aa13.4□□□□□ -0.26
GGA3-204ENST00000578208 APOBRQ0VD83 1088 aa13.4□□□□□ -0.26
GGA3-204ENST00000578208 SNX17Q15036 470 aa13.4□□□□□ -0.26
GGA3-204ENST00000578208 TRIM60Q495X7 471 aa13.4□□□□□ -0.26
GGA3-204ENST00000578208 C1orf53Q5VUE5 145 aa13.4□□□□□ -0.26
GGA3-204ENST00000578208 SEPT14Q6ZU15 432 aa13.4□□□□□ -0.26
GGA3-204ENST00000578208 HEATR3Q7Z4Q2 680 aa13.4□□□□□ -0.26
GGA3-204ENST00000578208 FCHSD1Q86WN1 690 aa13.4□□□□□ -0.26
GGA3-204ENST00000578208 OR6J1Q8NGC5 347 aa13.4□□□□□ -0.26
GGA3-204ENST00000578208 PRDM5Q9NQX1 630 aaPredicted RBP13.4□□□□□ -0.26
GGA3-204ENST00000578208 CYP46A1Q9Y6A2 500 aa13.4□□□□□ -0.26
GGA3-204ENST00000578208 ELP1O95163 1332 aa13.39□□□□□ -0.27
GGA3-204ENST00000578208 CNTNAP5Q8WYK1 1306 aa13.39□□□□□ -0.27
GGA3-204ENST00000578208 PQBP1O60828 265 aaKnown RBP13.39□□□□□ -0.27
GGA3-204ENST00000578208 EIF3JO75822 258 aaKnown RBP13.39□□□□□ -0.27
GGA3-204ENST00000578208 MYCLP12524 364 aaPredicted RBP13.39□□□□□ -0.27
GGA3-204ENST00000578208 NKX3-2P78367 333 aa13.39□□□□□ -0.27
GGA3-204ENST00000578208 CCSAPQ6IQ19 270 aaPredicted RBP13.39□□□□□ -0.27
GGA3-204ENST00000578208 RUFY3Q7L099 469 aa13.39□□□□□ -0.27
GGA3-204ENST00000578208 LBHD1Q9BQE6 289 aaPredicted RBP13.39□□□□□ -0.27
GGA3-204ENST00000578208 PDCD2LQ9BRP1 358 aa13.39□□□□□ -0.27
GGA3-204ENST00000578208 POLR3EQ9NVU0 708 aa13.39□□□□□ -0.27
GGA3-204ENST00000578208 COLQQ9Y215 455 aaPredicted RBP13.39□□□□□ -0.27
GGA3-204ENST00000578208 MRVI1Q9Y6F6 885 aa13.39□□□□□ -0.27
GGA3-204ENST00000578208 hCG_1642624A0A1W2PR95 340 aa13.38□□□□□ -0.27
GGA3-204ENST00000578208 DCDC2CA8MYV0 355 aa13.38□□□□□ -0.27
GGA3-204ENST00000578208 hCG_1984214I3L0E3 225 aa13.38□□□□□ -0.27
GGA3-204ENST00000578208 IRX5P78411 483 aaPredicted RBP13.38□□□□□ -0.27
GGA3-204ENST00000578208 PGM5Q15124 567 aa13.38□□□□□ -0.27
GGA3-204ENST00000578208 PPP1R18Q6NYC8 613 aa13.38□□□□□ -0.27
GGA3-204ENST00000578208 KCNV1Q6PIU1 500 aa13.38□□□□□ -0.27
GGA3-204ENST00000578208 FBXL16Q8N461 479 aa13.38□□□□□ -0.27
GGA3-204ENST00000578208 ZNF713Q8N859 430 aaPredicted RBP13.38□□□□□ -0.27
GGA3-204ENST00000578208 TM6SF1Q9BZW5 370 aa13.38□□□□□ -0.27
GGA3-204ENST00000578208 PSTPIP2Q9H939 334 aa13.38□□□□□ -0.27
GGA3-204ENST00000578208 ZSWIM6Q9HCJ5 1215 aa13.38□□□□□ -0.27
GGA3-204ENST00000578208 CTAGE5O15320 804 aa13.37□□□□□ -0.27
GGA3-204ENST00000578208 TLR3O15455 904 aaKnown RBP13.37□□□□□ -0.27
GGA3-204ENST00000578208 GH1P01241 217 aa13.37□□□□□ -0.27
GGA3-204ENST00000578208 MYL3P08590 195 aa13.37□□□□□ -0.27
GGA3-204ENST00000578208 CLTBP09497 229 aa13.37□□□□□ -0.27
GGA3-204ENST00000578208 MAGEA10P43363 369 aaPredicted RBP13.37□□□□□ -0.27
GGA3-204ENST00000578208 NAPAP54920 295 aa13.37□□□□□ -0.27
GGA3-204ENST00000578208 AKAP17AQ02040 695 aaKnown RBP13.37□□□□□ -0.27
GGA3-204ENST00000578208 TLE2Q04725 743 aa13.37□□□□□ -0.27
GGA3-204ENST00000578208 GNPTABQ3T906 1256 aa13.37□□□□□ -0.27
GGA3-204ENST00000578208 HABP4Q5JVS0 413 aaKnown RBP13.37□□□□□ -0.27
GGA3-204ENST00000578208 CXCL17Q6UXB2 119 aa13.37□□□□□ -0.27
GGA3-204ENST00000578208 GPKOWQ92917 476 aaPredicted RBP eCLIP13.37□□□□□ -0.27
GGA3-204ENST00000578208 SEZ6LQ9BYH1 1024 aa13.37□□□□□ -0.27
GGA3-204ENST00000578208 AGXT2Q9BYV1 514 aa13.37□□□□□ -0.27
GGA3-204ENST00000578208 EHMT1Q9H9B1 1298 aa13.37□□□□□ -0.27
GGA3-204ENST00000578208 RBM27Q9P2N5 1060 aaKnown RBP13.37□□□□□ -0.27
GGA3-204ENST00000578208 BAZ2BQ9UIF8 2168 aaKnown RBP13.37□□□□□ -0.27
GGA3-204ENST00000578208 NID2Q14112 1375 aa13.36□□□□□ -0.27
GGA3-204ENST00000578208 SPDYE3A6NKU9 549 aa13.36□□□□□ -0.27
GGA3-204ENST00000578208 ARVCFO00192 962 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms