RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 CCDC38Q502W7 563 aa7.75□□□□□ -1.17
KRT39-203ENST00000578078 RC3H1Q5TC82 1133 aaKnown RBP7.75□□□□□ -1.17
KRT39-203ENST00000578078 Q6ZUG5 572 aa7.75□□□□□ -1.17
KRT39-203ENST00000578078 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.75□□□□□ -1.17
KRT39-203ENST00000578078 JDP2Q8WYK2 163 aa7.75□□□□□ -1.17
KRT39-203ENST00000578078 FAM204AQ9H8W3 233 aa7.75□□□□□ -1.17
KRT39-203ENST00000578078 ACTR5Q9H9F9 607 aaPredicted RBP7.75□□□□□ -1.17
KRT39-203ENST00000578078 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.75□□□□□ -1.17
KRT39-203ENST00000578078 ZNF358Q9NW07 568 aa7.75□□□□□ -1.17
KRT39-203ENST00000578078 SIRPGQ9P1W8 387 aa7.75□□□□□ -1.17
KRT39-203ENST00000578078 TAF6LQ9Y6J9 622 aa7.75□□□□□ -1.17
KRT39-203ENST00000578078 MYH15Q9Y2K3 1946 aa7.74□□□□□ -1.17
KRT39-203ENST00000578078 POTEFA5A3E0 1075 aa7.74□□□□□ -1.17
KRT39-203ENST00000578078 TNFRSF10BO14763 440 aa7.74□□□□□ -1.17
KRT39-203ENST00000578078 MEFVO15553 781 aaPredicted RBP7.74□□□□□ -1.17
KRT39-203ENST00000578078 PPFIA3O75145 1194 aa7.74□□□□□ -1.17
KRT39-203ENST00000578078 PPFIA2O75334 1257 aa7.74□□□□□ -1.17
KRT39-203ENST00000578078 FGFR2P21802 821 aa7.74□□□□□ -1.17
KRT39-203ENST00000578078 CDR1P51861 262 aa7.74□□□□□ -1.17
KRT39-203ENST00000578078 NAIF1Q69YI7 327 aaPredicted RBP7.74□□□□□ -1.17
KRT39-203ENST00000578078 ARMCX5Q6P1M9 558 aa7.74□□□□□ -1.17
KRT39-203ENST00000578078 DHX32Q7L7V1 743 aaKnown RBP7.74□□□□□ -1.17
KRT39-203ENST00000578078 DHX40Q8IX18 779 aaKnown RBP7.74□□□□□ -1.17
KRT39-203ENST00000578078 GJD3Q8N144 294 aa7.74□□□□□ -1.17
KRT39-203ENST00000578078 NECAB1Q8N987 351 aa7.74□□□□□ -1.17
KRT39-203ENST00000578078 LRRN4CLQ8ND94 238 aa7.74□□□□□ -1.17
KRT39-203ENST00000578078 RASGRP4Q8TDF6 673 aa7.74□□□□□ -1.17
KRT39-203ENST00000578078 SCG3Q8WXD2 468 aaKnown RBP7.74□□□□□ -1.17
KRT39-203ENST00000578078 OSBP2Q969R2 916 aa7.74□□□□□ -1.17
KRT39-203ENST00000578078 RSRC1Q96IZ7 334 aaKnown RBP7.74□□□□□ -1.17
KRT39-203ENST00000578078 RPGRIP1Q96KN7 1286 aa7.74□□□□□ -1.17
KRT39-203ENST00000578078 TCEANC2Q96MN5 208 aa7.74□□□□□ -1.17
KRT39-203ENST00000578078 ANKRD27Q96NW4 1050 aa7.74□□□□□ -1.17
KRT39-203ENST00000578078 OSBPL9Q96SU4 736 aa7.74□□□□□ -1.17
KRT39-203ENST00000578078 MOV10L1Q9BXT6 1211 aaKnown RBP7.74□□□□□ -1.17
KRT39-203ENST00000578078 NYXQ9GZU5 481 aa7.74□□□□□ -1.17
KRT39-203ENST00000578078 MYO1AQ9UBC5 1043 aa7.74□□□□□ -1.17
KRT39-203ENST00000578078 GOLGA6L7A0A1B0GV03 622 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 VPS37CA5D8V6 355 aaPredicted RBP7.73□□□□□ -1.17
KRT39-203ENST00000578078 E7EWF7 191 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 PDLIM1O00151 329 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 EIF3HO15372 352 aaKnown RBP eCLIP7.73□□□□□ -1.17
KRT39-203ENST00000578078 GPAA1O43292 621 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 KINO60870 393 aaKnown RBP7.73□□□□□ -1.17
KRT39-203ENST00000578078 CUTAO60888 179 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 ZPR1O75312 459 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 RPS6KA4O75676 772 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 IDH1O75874 414 aaKnown RBP7.73□□□□□ -1.17
KRT39-203ENST00000578078 RASSF9O75901 435 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 ADD2P35612 726 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 PHKA1P46020 1223 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 UBE3CQ15386 1083 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 WHAMMP3Q1A5X7 153 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 SLC9C2Q5TAH2 1124 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 EMC10Q5UCC4 262 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 FOXR1Q6PIV2 292 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 BRICD5Q6PL45 260 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 CPLX2Q6PUV4 134 aaKnown RBP7.73□□□□□ -1.17
KRT39-203ENST00000578078 PI16Q6UXB8 463 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 CCDC170Q8IYT3 715 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 CCHCR1Q8TD31 782 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 LEO1Q8WVC0 666 aaPredicted RBP7.73□□□□□ -1.17
KRT39-203ENST00000578078 SAAL1Q96ER3 474 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 BORCS6Q96GS4 357 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 ZNF408Q9H9D4 720 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 NEUROD4Q9HD90 331 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 SEC31BQ9NQW1 1179 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 EVA1BQ9NVM1 165 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 NARFQ9UHQ1 456 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 CDC23Q9UJX2 597 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 CCNL1Q9UK58 526 aaPredicted RBP7.73□□□□□ -1.17
KRT39-203ENST00000578078 TAF1P21675 1872 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 TARSL2A2RTX5 802 aaKnown RBP7.73□□□□□ -1.17
KRT39-203ENST00000578078 ACTN4O43707 911 aaKnown RBP7.73□□□□□ -1.17
KRT39-203ENST00000578078 AHCYL1O43865 530 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 RNF40O75150 1001 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 FESP07332 822 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 CCNYL3P0C7X3 344 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 IMPDH2P12268 514 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 EIF4BP23588 611 aaKnown RBP7.73□□□□□ -1.17
KRT39-203ENST00000578078 LIG3P49916 1009 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 ST3GAL1Q11201 340 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 MAP3K12Q12852 859 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 STK3Q13188 491 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 SF3B3Q15393 1217 aaKnown RBP7.73□□□□□ -1.17
KRT39-203ENST00000578078 ERFEQ4G0M1 354 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 CEP85LQ5SZL2 805 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 LARP1BQ659C4 914 aaKnown RBP7.73□□□□□ -1.17
KRT39-203ENST00000578078 SPTY2D1Q68D10 685 aaPredicted RBP7.73□□□□□ -1.17
KRT39-203ENST00000578078 CDCA2Q69YH5 1023 aaPredicted RBP7.73□□□□□ -1.17
KRT39-203ENST00000578078 GPR153Q6NV75 609 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 TLDC1Q6P9B6 456 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 CRELD2Q6UXH1 353 aaPredicted RBP7.73□□□□□ -1.17
KRT39-203ENST00000578078 STOX1Q6ZVD7 989 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 SH3BP5LQ7L8J4 393 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 SPATA5Q8NB90 893 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 FAM76AQ8TAV0 307 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 BRF1Q92994 677 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 KIFC2Q96AC6 838 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 SEC16BQ96JE7 1060 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms