RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 CT47A1Q5JQC4 288 aaPredicted RBP16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 AMIGO3Q86WK7 504 aa16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 EHBP1Q8NDI1 1231 aa16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 MTA3Q9BTC8 594 aa16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 THAP9Q9H5L6 903 aa16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 C6orf50Q9HD87 102 aa16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 THRAP3Q9Y2W1 955 aaKnown RBP16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 TDP2O95551 362 aa16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 SRGNP10124 158 aa16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 GIMAP8Q8ND71 665 aaPredicted RBP16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 USP21Q9UK80 565 aa16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 PCDHA13Q9Y5I0 950 aa16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 FAM114A1Q8IWE2 563 aa16.35■□□□□ 0.21
CUEDC1-206ENST00000577830 KCNG1Q9UIX4 513 aa16.35■□□□□ 0.21
CUEDC1-206ENST00000577830 NHSL1Q5SYE7 1610 aa16.35■□□□□ 0.21
CUEDC1-206ENST00000577830 STXBP3O00186 592 aa16.35■□□□□ 0.21
CUEDC1-206ENST00000577830 ORC4O43929 436 aa16.35■□□□□ 0.21
CUEDC1-206ENST00000577830 SLURP2P0DP57 97 aa16.35■□□□□ 0.21
CUEDC1-206ENST00000577830 AMPD3Q01432 767 aa16.35■□□□□ 0.21
CUEDC1-206ENST00000577830 NEK8Q86SG6 692 aa16.35■□□□□ 0.21
CUEDC1-206ENST00000577830 TEX11Q8IYF3 940 aa16.35■□□□□ 0.21
CUEDC1-206ENST00000577830 SH2D3CQ8N5H7 860 aa16.35■□□□□ 0.21
CUEDC1-206ENST00000577830 DNAJC7Q99615 494 aa16.35■□□□□ 0.21
CUEDC1-206ENST00000577830 CCNL1Q9UK58 526 aaPredicted RBP16.35■□□□□ 0.21
CUEDC1-206ENST00000577830 ZSCAN5CA6NGD5 496 aaPredicted RBP16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 USP17L5A8MUK1 530 aa16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 PSMD14O00487 310 aa16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 ZNF263O14978 683 aa16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 SLC16A2P36021 539 aa16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 LIG3P49916 1009 aa16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 GNAQP50148 359 aa16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 RAPGEF1Q13905 1077 aa16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 CALCRLQ16602 461 aa16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 KLHL7Q8IXQ5 586 aa16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 NDST4Q9H3R1 872 aa16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 GOLPH3Q9H4A6 298 aa16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 PDS5AQ29RF7 1337 aaKnown RBP16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 BAG3O95817 575 aa16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 SYF2O95926 243 aaKnown RBP16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 REXO1Q8N1G1 1221 aaKnown RBP16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 ZNF507Q8TCN5 953 aa16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 ALS2CR12Q96Q35 445 aa16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 SEMA6BQ9H3T3 888 aa16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 ITGB4P16144 1822 aa16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 EIF3CLB5ME19 914 aaKnown RBP16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 RHOBTB3O94955 611 aa16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 HLTFQ14527 1009 aaKnown RBP eCLIP16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 NFIXQ14938 502 aa16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 C12orf60Q5U649 245 aa16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 FBXO33Q7Z6M2 555 aa16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 EIF3CQ99613 913 aaKnown RBP16.34■□□□□ 0.21
CUEDC1-206ENST00000577830 SPTY2D1Q68D10 685 aaPredicted RBP16.33■□□□□ 0.21
CUEDC1-206ENST00000577830 NUDT12Q9BQG2 462 aa16.33■□□□□ 0.21
CUEDC1-206ENST00000577830 BARHL2Q9NY43 387 aa16.33■□□□□ 0.21
CUEDC1-206ENST00000577830 BCCIPQ9P287 314 aaKnown RBP eCLIP16.33■□□□□ 0.21
CUEDC1-206ENST00000577830 ARHGAP20Q9P2F6 1191 aa16.33■□□□□ 0.21
CUEDC1-206ENST00000577830 MYMKA6NI61 221 aa16.33■□□□□ 0.2
CUEDC1-206ENST00000577830 NOP2P46087 812 aaKnown RBP16.33■□□□□ 0.2
CUEDC1-206ENST00000577830 VAV2P52735 878 aa16.33■□□□□ 0.2
CUEDC1-206ENST00000577830 GNGT1P63211 74 aa16.33■□□□□ 0.2
CUEDC1-206ENST00000577830 MUM1L1Q5H9M0 696 aa16.33■□□□□ 0.2
CUEDC1-206ENST00000577830 C8orf74Q6P047 294 aa16.33■□□□□ 0.2
CUEDC1-206ENST00000577830 CNNM4Q6P4Q7 775 aa16.33■□□□□ 0.2
CUEDC1-206ENST00000577830 DHTKD1Q96HY7 919 aaPredicted RBP16.33■□□□□ 0.2
CUEDC1-206ENST00000577830 MED4Q9NPJ6 270 aa16.33■□□□□ 0.2
CUEDC1-206ENST00000577830 RASSF10A6NK89 507 aa16.33■□□□□ 0.2
CUEDC1-206ENST00000577830 SLC1A4P43007 532 aa16.33■□□□□ 0.2
CUEDC1-206ENST00000577830 POLR2FP61218 127 aaKnown RBP16.33■□□□□ 0.2
CUEDC1-206ENST00000577830 IQCEQ6IPM2 695 aa16.33■□□□□ 0.2
CUEDC1-206ENST00000577830 KIAA0895Q8NCT3 520 aa16.33■□□□□ 0.2
CUEDC1-206ENST00000577830 NOC3LQ8WTT2 800 aaKnown RBP16.33■□□□□ 0.2
CUEDC1-206ENST00000577830 KBTBD4Q9NVX7 518 aa16.33■□□□□ 0.2
CUEDC1-206ENST00000577830 TULP2O00295 520 aa16.32■□□□□ 0.2
CUEDC1-206ENST00000577830 RIMBP2O15034 1052 aa16.32■□□□□ 0.2
CUEDC1-206ENST00000577830 BTDP43251 543 aa16.32■□□□□ 0.2
CUEDC1-206ENST00000577830 EHHADHQ08426 723 aa16.32■□□□□ 0.2
CUEDC1-206ENST00000577830 TCERG1LQ5VWI1 586 aa16.32■□□□□ 0.2
CUEDC1-206ENST00000577830 CCNI2Q6ZMN8 369 aaPredicted RBP16.32■□□□□ 0.2
CUEDC1-206ENST00000577830 BCAS4Q8TDM0 211 aa16.32■□□□□ 0.2
CUEDC1-206ENST00000577830 MCM3P25205 808 aa16.32■□□□□ 0.2
CUEDC1-206ENST00000577830 CEP95Q96GE4 821 aa16.32■□□□□ 0.2
CUEDC1-206ENST00000577830 NUP58Q9BVL2 599 aa16.32■□□□□ 0.2
CUEDC1-206ENST00000577830 SLIT2O94813 1529 aa16.32■□□□□ 0.2
CUEDC1-206ENST00000577830 NPHP3-ACAD11A0A0J9YXS1 232 aa16.32■□□□□ 0.2
CUEDC1-206ENST00000577830 GUCY2DQ02846 1103 aa16.32■□□□□ 0.2
CUEDC1-206ENST00000577830 GRM4Q14833 912 aa16.32■□□□□ 0.2
CUEDC1-206ENST00000577830 TMEM266Q2M3C6 531 aa16.32■□□□□ 0.2
CUEDC1-206ENST00000577830 VWA3BQ502W6 1294 aa16.32■□□□□ 0.2
CUEDC1-206ENST00000577830 SPATA4Q8NEY3 305 aa16.32■□□□□ 0.2
CUEDC1-206ENST00000577830 A0A1W2PQC6 194 aa16.31■□□□□ 0.2
CUEDC1-206ENST00000577830 GNA11P29992 359 aa16.31■□□□□ 0.2
CUEDC1-206ENST00000577830 HPDP32754 393 aaPredicted RBP16.31■□□□□ 0.2
CUEDC1-206ENST00000577830 KRT79Q5XKE5 535 aa16.31■□□□□ 0.2
CUEDC1-206ENST00000577830 TPTE2Q6XPS3 522 aa16.31■□□□□ 0.2
CUEDC1-206ENST00000577830 MAATS1Q7Z4T9 603 aa16.31■□□□□ 0.2
CUEDC1-206ENST00000577830 DGKHQ86XP1 1220 aa16.31■□□□□ 0.2
CUEDC1-206ENST00000577830 C6orf229H3BNL8 230 aa16.31■□□□□ 0.2
CUEDC1-206ENST00000577830 SLC37A4O43826 429 aa16.31■□□□□ 0.2
CUEDC1-206ENST00000577830 PDCLQ13371 301 aa16.31■□□□□ 0.2
CUEDC1-206ENST00000577830 TRMT1LQ7Z2T5 733 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms