RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 PXMP2Q9NR77 195 aa18.1■□□□□ 0.49
NCBP3-207ENST00000577169 NID2Q14112 1375 aa18.09■□□□□ 0.49
NCBP3-207ENST00000577169 NR3C2P08235 984 aa18.09■□□□□ 0.49
NCBP3-207ENST00000577169 NEK4P51957 841 aa18.09■□□□□ 0.49
NCBP3-207ENST00000577169 STK3Q13188 491 aa18.09■□□□□ 0.49
NCBP3-207ENST00000577169 TMEM63BQ5T3F8 832 aa18.09■□□□□ 0.49
NCBP3-207ENST00000577169 WWC2Q6AWC2 1192 aa18.09■□□□□ 0.49
NCBP3-207ENST00000577169 USP17L6PQ6QN14 398 aa18.09■□□□□ 0.49
NCBP3-207ENST00000577169 NOL8Q76FK4 1167 aaKnown RBP18.09■□□□□ 0.49
NCBP3-207ENST00000577169 PSTPIP2Q9H939 334 aa18.09■□□□□ 0.49
NCBP3-207ENST00000577169 RBM47A0AV96 593 aaKnown RBP18.08■□□□□ 0.48
NCBP3-207ENST00000577169 DNM1LO00429 736 aa18.08■□□□□ 0.48
NCBP3-207ENST00000577169 MEIS2O14770 477 aa18.08■□□□□ 0.48
NCBP3-207ENST00000577169 PRPF3O43395 683 aaKnown RBP18.08■□□□□ 0.48
NCBP3-207ENST00000577169 PPFIA3O75145 1194 aa18.08■□□□□ 0.48
NCBP3-207ENST00000577169 COL6A1P12109 1028 aa18.08■□□□□ 0.48
NCBP3-207ENST00000577169 SMPD1P17405 629 aa18.08■□□□□ 0.48
NCBP3-207ENST00000577169 AK2P54819 239 aa18.08■□□□□ 0.48
NCBP3-207ENST00000577169 IRX5P78411 483 aaPredicted RBP18.08■□□□□ 0.48
NCBP3-207ENST00000577169 STXBP2Q15833 593 aa18.08■□□□□ 0.48
NCBP3-207ENST00000577169 SMARCC2Q8TAQ2 1214 aa18.08■□□□□ 0.48
NCBP3-207ENST00000577169 CUL5Q93034 780 aa18.08■□□□□ 0.48
NCBP3-207ENST00000577169 PHKBQ93100 1093 aa18.08■□□□□ 0.48
NCBP3-207ENST00000577169 HTATIP2Q9BUP3 242 aa18.08■□□□□ 0.48
NCBP3-207ENST00000577169 C22orf23Q9BZE7 217 aa18.08■□□□□ 0.48
NCBP3-207ENST00000577169 SENP6Q9GZR1 1112 aaPredicted RBP18.08■□□□□ 0.48
NCBP3-207ENST00000577169 TPCN1Q9ULQ1 816 aa18.08■□□□□ 0.48
NCBP3-207ENST00000577169 SYNRGQ9UMZ2 1314 aa18.07■□□□□ 0.48
NCBP3-207ENST00000577169 KBTBD13C9JR72 458 aa18.07■□□□□ 0.48
NCBP3-207ENST00000577169 ADAMTS4O75173 837 aa18.07■□□□□ 0.48
NCBP3-207ENST00000577169 MYCLP12524 364 aaPredicted RBP18.07■□□□□ 0.48
NCBP3-207ENST00000577169 IFNAR1P17181 557 aa18.07■□□□□ 0.48
NCBP3-207ENST00000577169 PTGS1P23219 599 aa18.07■□□□□ 0.48
NCBP3-207ENST00000577169 ANKRD1Q15327 319 aa18.07■□□□□ 0.48
NCBP3-207ENST00000577169 PKN1Q16512 942 aa18.07■□□□□ 0.48
NCBP3-207ENST00000577169 RNF180Q86T96 592 aa18.07■□□□□ 0.48
NCBP3-207ENST00000577169 KLHDC9Q8NEP7 349 aa18.07■□□□□ 0.48
NCBP3-207ENST00000577169 DPF3Q92784 378 aa18.07■□□□□ 0.48
NCBP3-207ENST00000577169 PDCD2LQ9BRP1 358 aa18.07■□□□□ 0.48
NCBP3-207ENST00000577169 WDR11Q9BZH6 1224 aa18.07■□□□□ 0.48
NCBP3-207ENST00000577169 GNEQ9Y223 722 aaKnown RBP18.07■□□□□ 0.48
NCBP3-207ENST00000577169 MYADML2A6NDP7 307 aa18.06■□□□□ 0.48
NCBP3-207ENST00000577169 STXBP3O00186 592 aa18.06■□□□□ 0.48
NCBP3-207ENST00000577169 PIK3CDO00329 1044 aa18.06■□□□□ 0.48
NCBP3-207ENST00000577169 DYNC1LI2O43237 492 aaPredicted RBP18.06■□□□□ 0.48
NCBP3-207ENST00000577169 NAPAP54920 295 aa18.06■□□□□ 0.48
NCBP3-207ENST00000577169 GJA9P57773 515 aa18.06■□□□□ 0.48
NCBP3-207ENST00000577169 AKAP17AQ02040 695 aaKnown RBP18.06■□□□□ 0.48
NCBP3-207ENST00000577169 PGM5Q15124 567 aa18.06■□□□□ 0.48
NCBP3-207ENST00000577169 PFKFB3Q16875 520 aaPredicted RBP18.06■□□□□ 0.48
NCBP3-207ENST00000577169 TYW1BQ6NUM6 668 aa18.06■□□□□ 0.48
NCBP3-207ENST00000577169 SEPT14Q6ZU15 432 aa18.06■□□□□ 0.48
NCBP3-207ENST00000577169 VSIG10LQ86VR7 867 aa18.06■□□□□ 0.48
NCBP3-207ENST00000577169 ZFP91Q96JP5 570 aaPredicted RBP18.06■□□□□ 0.48
NCBP3-207ENST00000577169 SLC26A6Q9BXS9 759 aa18.06■□□□□ 0.48
NCBP3-207ENST00000577169 UPF3AQ9H1J1 476 aaKnown RBP18.06■□□□□ 0.48
NCBP3-207ENST00000577169 SLKQ9H2G2 1235 aaPredicted RBP18.06■□□□□ 0.48
NCBP3-207ENST00000577169 SPC25Q9HBM1 224 aa18.06■□□□□ 0.48
NCBP3-207ENST00000577169 BARHL2Q9NY43 387 aa18.06■□□□□ 0.48
NCBP3-207ENST00000577169 SMCO2A6NFE2 343 aa18.05■□□□□ 0.48
NCBP3-207ENST00000577169 EIF3JO75822 258 aaKnown RBP18.05■□□□□ 0.48
NCBP3-207ENST00000577169 C6orf222P0C671 652 aaPredicted RBP18.05■□□□□ 0.48
NCBP3-207ENST00000577169 SCG2P13521 617 aa18.05■□□□□ 0.48
NCBP3-207ENST00000577169 SSRP1Q08945 709 aaKnown RBP18.05■□□□□ 0.48
NCBP3-207ENST00000577169 KCNA10Q16322 511 aa18.05■□□□□ 0.48
NCBP3-207ENST00000577169 UBE2SQ16763 222 aa18.05■□□□□ 0.48
NCBP3-207ENST00000577169 DUSP28Q4G0W2 176 aa18.05■□□□□ 0.48
NCBP3-207ENST00000577169 IL31RAQ8NI17 732 aa18.05■□□□□ 0.48
NCBP3-207ENST00000577169 FERMT2Q96AC1 680 aa18.05■□□□□ 0.48
NCBP3-207ENST00000577169 KIF2CQ99661 725 aa18.05■□□□□ 0.48
NCBP3-207ENST00000577169 RNF26Q9BY78 433 aaPredicted RBP18.05■□□□□ 0.48
NCBP3-207ENST00000577169 AP5M1Q9H0R1 490 aa18.05■□□□□ 0.48
NCBP3-207ENST00000577169 Q9Y3F1 56 aa18.05■□□□□ 0.48
NCBP3-207ENST00000577169 LRRC37A2A6NM11 1700 aa18.05■□□□□ 0.48
NCBP3-207ENST00000577169 hCG_1984214I3L0E3 225 aa18.04■□□□□ 0.48
NCBP3-207ENST00000577169 CPLX1O14810 134 aa18.04■□□□□ 0.48
NCBP3-207ENST00000577169 CTAGE5O15320 804 aa18.04■□□□□ 0.48
NCBP3-207ENST00000577169 PFKFB2O60825 505 aa18.04■□□□□ 0.48
NCBP3-207ENST00000577169 RBM25P49756 843 aaKnown RBP18.04■□□□□ 0.48
NCBP3-207ENST00000577169 BEX3Q00994 111 aa18.04■□□□□ 0.48
NCBP3-207ENST00000577169 SCRN1Q12765 414 aa18.04■□□□□ 0.48
NCBP3-207ENST00000577169 GNASQ5JWF2 1037 aa18.04■□□□□ 0.48
NCBP3-207ENST00000577169 CCSAPQ6IQ19 270 aaPredicted RBP18.04■□□□□ 0.48
NCBP3-207ENST00000577169 ZNF713Q8N859 430 aaPredicted RBP18.04■□□□□ 0.48
NCBP3-207ENST00000577169 SCFD2Q8WU76 684 aa18.04■□□□□ 0.48
NCBP3-207ENST00000577169 TSEN34Q9BSV6 310 aaKnown RBP18.04■□□□□ 0.48
NCBP3-207ENST00000577169 RIC8AQ9NPQ8 531 aa18.04■□□□□ 0.48
NCBP3-207ENST00000577169 RBM27Q9P2N5 1060 aaKnown RBP18.04■□□□□ 0.48
NCBP3-207ENST00000577169 PHF24Q9UPV7 400 aa18.04■□□□□ 0.48
NCBP3-207ENST00000577169 ARIH2O95376 493 aa18.03■□□□□ 0.48
NCBP3-207ENST00000577169 TXNP10599 105 aaKnown RBP18.03■□□□□ 0.48
NCBP3-207ENST00000577169 CCND2P30279 289 aa18.03■□□□□ 0.48
NCBP3-207ENST00000577169 ATN1P54259 1190 aaPredicted RBP18.03■□□□□ 0.48
NCBP3-207ENST00000577169 NKX3-2P78367 333 aa18.03■□□□□ 0.48
NCBP3-207ENST00000577169 TTLL4Q14679 1199 aa18.03■□□□□ 0.48
NCBP3-207ENST00000577169 PPP1R18Q6NYC8 613 aa18.03■□□□□ 0.48
NCBP3-207ENST00000577169 CCDC62Q6P9F0 684 aa18.03■□□□□ 0.48
NCBP3-207ENST00000577169 CPLX2Q6PUV4 134 aaKnown RBP18.03■□□□□ 0.48
NCBP3-207ENST00000577169 TLK2Q86UE8 772 aa18.03■□□□□ 0.48
NCBP3-207ENST00000577169 COPS5Q92905 334 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms