RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 DNAJC17Q9NVM6 304 aaKnown RBP19.64■□□□□ 0.73
ATPAF1-214ENST00000576409 SWAP70Q9UH65 585 aa19.64■□□□□ 0.73
ATPAF1-214ENST00000576409 CALUO43852 315 aaPredicted RBP19.63■□□□□ 0.73
ATPAF1-214ENST00000576409 CTNND1O60716 968 aaKnown RBP19.63■□□□□ 0.73
ATPAF1-214ENST00000576409 TMTC3Q6ZXV5 915 aa19.63■□□□□ 0.73
ATPAF1-214ENST00000576409 UBL4BQ8N7F7 174 aa19.63■□□□□ 0.73
ATPAF1-214ENST00000576409 CCDC127Q96BQ5 260 aa19.63■□□□□ 0.73
ATPAF1-214ENST00000576409 STIM2Q9P246 746 aa19.63■□□□□ 0.73
ATPAF1-214ENST00000576409 IQGAP1P46940 1657 aa19.63■□□□□ 0.73
ATPAF1-214ENST00000576409 ARHGEF35A5YM69 484 aa19.63■□□□□ 0.73
ATPAF1-214ENST00000576409 UBXN2AP68543 259 aa19.63■□□□□ 0.73
ATPAF1-214ENST00000576409 SMIM5Q71RC9 77 aa19.63■□□□□ 0.73
ATPAF1-214ENST00000576409 CCDC63Q8NA47 563 aa19.63■□□□□ 0.73
ATPAF1-214ENST00000576409 ADD3Q9UEY8 706 aaKnown RBP19.63■□□□□ 0.73
ATPAF1-214ENST00000576409 IFNB1P01574 187 aa19.63■□□□□ 0.73
ATPAF1-214ENST00000576409 H2AFXP16104 143 aaPredicted RBP19.63■□□□□ 0.73
ATPAF1-214ENST00000576409 RBM43Q6ZSC3 357 aaKnown RBP19.63■□□□□ 0.73
ATPAF1-214ENST00000576409 SLAIN2Q9P270 581 aa19.63■□□□□ 0.73
ATPAF1-214ENST00000576409 NRKQ7Z2Y5 1582 aa19.63■□□□□ 0.73
ATPAF1-214ENST00000576409 KRT15P19012 456 aa19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 TRIM68Q6AZZ1 485 aa19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 SRLQ86TD4 932 aa19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 LRRC1Q9BTT6 524 aa19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 CEP152O94986 1710 aa19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 LOC102724428A0A0B4J2F2 783 aa19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 LRRC53A6NM62 1247 aa19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 BTDP43251 543 aa19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 USP14P54578 494 aa19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 SIK1P57059 783 aa19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 MECOMQ03112 1051 aa19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 NR1I3Q14994 352 aa19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 RBM26Q5T8P6 1007 aaKnown RBP19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 A0A1B0GTH6 734 aa19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 MESDQ14696 234 aa19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 NCAPHQ15003 741 aa19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 TXNRD1Q16881 649 aa19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 ERFEQ4G0M1 354 aa19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 ICE2Q659A1 982 aa19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 KCTD1Q719H9 257 aa19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 NUCKS1Q9H1E3 243 aaKnown RBP19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 NEBLO76041 1014 aa19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 GYPCP04921 128 aa19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 ZNF131P52739 623 aa19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 FAM98CQ17RN3 349 aaKnown RBP19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 FOXP4Q8IVH2 680 aaPredicted RBP19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 MYCBPQ99417 103 aaPredicted RBP19.62■□□□□ 0.73
ATPAF1-214ENST00000576409 SFI1A8K8P3 1242 aa19.61■□□□□ 0.73
ATPAF1-214ENST00000576409 PALMO75781 387 aa19.61■□□□□ 0.73
ATPAF1-214ENST00000576409 ACTN3Q08043 901 aaPredicted RBP19.61■□□□□ 0.73
ATPAF1-214ENST00000576409 ZNF579Q8NAF0 562 aaKnown RBP19.61■□□□□ 0.73
ATPAF1-214ENST00000576409 ATP8A2Q9NTI2 1148 aa19.61■□□□□ 0.73
ATPAF1-214ENST00000576409 GGA1Q9UJY5 639 aa19.61■□□□□ 0.73
ATPAF1-214ENST00000576409 SETBP1Q9Y6X0 1596 aa19.61■□□□□ 0.73
ATPAF1-214ENST00000576409 ATP2A1O14983 1001 aa19.61■□□□□ 0.73
ATPAF1-214ENST00000576409 GFPT2O94808 682 aa19.61■□□□□ 0.73
ATPAF1-214ENST00000576409 HIBCHQ6NVY1 386 aaPredicted RBP19.61■□□□□ 0.73
ATPAF1-214ENST00000576409 PHLDB2Q86SQ0 1253 aa19.61■□□□□ 0.73
ATPAF1-214ENST00000576409 SGMS1Q86VZ5 419 aa19.61■□□□□ 0.73
ATPAF1-214ENST00000576409 STAG1Q8WVM7 1258 aa19.61■□□□□ 0.73
ATPAF1-214ENST00000576409 ARHGEF2Q92974 986 aaKnown RBP19.61■□□□□ 0.73
ATPAF1-214ENST00000576409 MAGOHBQ96A72 148 aaKnown RBP19.61■□□□□ 0.73
ATPAF1-214ENST00000576409 ARHGAP31Q2M1Z3 1444 aa19.61■□□□□ 0.73
ATPAF1-214ENST00000576409 FAM133BQ5BKY9 247 aaKnown RBP19.61■□□□□ 0.73
ATPAF1-214ENST00000576409 RETREG2Q8NC44 543 aa19.61■□□□□ 0.73
ATPAF1-214ENST00000576409 COG1Q8WTW3 980 aa19.61■□□□□ 0.73
ATPAF1-214ENST00000576409 CNKSR2Q8WXI2 1034 aa19.61■□□□□ 0.73
ATPAF1-214ENST00000576409 FEZ2Q9UHY8 353 aaPredicted RBP19.61■□□□□ 0.73
ATPAF1-214ENST00000576409 STX2P32856 288 aa19.6■□□□□ 0.73
ATPAF1-214ENST00000576409 SF3B2Q13435 895 aaKnown RBP19.6■□□□□ 0.73
ATPAF1-214ENST00000576409 MTMR3Q13615 1198 aa19.6■□□□□ 0.73
ATPAF1-214ENST00000576409 PPP4R3AQ6IN85 833 aa19.6■□□□□ 0.73
ATPAF1-214ENST00000576409 KCNB2Q92953 911 aa19.6■□□□□ 0.73
ATPAF1-214ENST00000576409 MS4A14Q96JA4 679 aa19.6■□□□□ 0.73
ATPAF1-214ENST00000576409 FUT8Q9BYC5 575 aa19.6■□□□□ 0.73
ATPAF1-214ENST00000576409 CCNL1Q9UK58 526 aaPredicted RBP19.6■□□□□ 0.73
ATPAF1-214ENST00000576409 THRAP3Q9Y2W1 955 aaKnown RBP19.6■□□□□ 0.73
ATPAF1-214ENST00000576409 PCDHA1Q9Y5I3 950 aa19.6■□□□□ 0.73
ATPAF1-214ENST00000576409 HECW2Q9P2P5 1572 aa19.6■□□□□ 0.73
ATPAF1-214ENST00000576409 CCDC160A6NGH7 325 aa19.6■□□□□ 0.73
ATPAF1-214ENST00000576409 SPICE1Q8N0Z3 855 aa19.6■□□□□ 0.73
ATPAF1-214ENST00000576409 LZTS2Q9BRK4 669 aa19.6■□□□□ 0.73
ATPAF1-214ENST00000576409 NT5C3AQ9H0P0 336 aa19.6■□□□□ 0.73
ATPAF1-214ENST00000576409 EHD2Q9NZN4 543 aa19.6■□□□□ 0.73
ATPAF1-214ENST00000576409 GUCY1A3Q02108 690 aa19.6■□□□□ 0.73
ATPAF1-214ENST00000576409 STAG2Q8N3U4 1231 aa19.6■□□□□ 0.73
ATPAF1-214ENST00000576409 RAB17Q9H0T7 212 aa19.6■□□□□ 0.73
ATPAF1-214ENST00000576409 KLK7P49862 253 aa19.59■□□□□ 0.73
ATPAF1-214ENST00000576409 FBXW10Q5XX13 1052 aa19.59■□□□□ 0.73
ATPAF1-214ENST00000576409 SYCE1Q8N0S2 351 aa19.59■□□□□ 0.73
ATPAF1-214ENST00000576409 PPM1KQ8N3J5 372 aa19.59■□□□□ 0.73
ATPAF1-214ENST00000576409 PPRC1Q5VV67 1664 aaKnown RBP19.59■□□□□ 0.73
ATPAF1-214ENST00000576409 TTC16Q8NEE8 873 aa19.59■□□□□ 0.73
ATPAF1-214ENST00000576409 THOC1Q96FV9 657 aaKnown RBP19.59■□□□□ 0.73
ATPAF1-214ENST00000576409 THAP9Q9H5L6 903 aa19.59■□□□□ 0.73
ATPAF1-214ENST00000576409 INTS9Q9NV88 658 aaKnown RBP19.59■□□□□ 0.73
ATPAF1-214ENST00000576409 ZNF804BA4D1E1 1349 aa19.59■□□□□ 0.73
ATPAF1-214ENST00000576409 CAMSAP1Q5T5Y3 1602 aa19.59■□□□□ 0.73
ATPAF1-214ENST00000576409 ATP11AP98196 1134 aa19.59■□□□□ 0.73
ATPAF1-214ENST00000576409 TRAPPC3LQ5T215 181 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms