RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 APOBRQ0VD83 1088 aa15.67■□□□□ 0.1
CIITA-210ENST00000575513 C8orf34Q49A92 452 aa15.67■□□□□ 0.1
CIITA-210ENST00000575513 DUSP28Q4G0W2 176 aa15.67■□□□□ 0.1
CIITA-210ENST00000575513 ARHGEF16Q5VV41 709 aa15.67■□□□□ 0.1
CIITA-210ENST00000575513 EEPD1Q7L9B9 569 aa15.67■□□□□ 0.1
CIITA-210ENST00000575513 RAB11FIP4Q86YS3 637 aa15.67■□□□□ 0.1
CIITA-210ENST00000575513 FBXO16Q8IX29 292 aaPredicted RBP15.67■□□□□ 0.1
CIITA-210ENST00000575513 ZNF713Q8N859 430 aaPredicted RBP15.67■□□□□ 0.1
CIITA-210ENST00000575513 SCFD2Q8WU76 684 aa15.67■□□□□ 0.1
CIITA-210ENST00000575513 PXMP2Q9NR77 195 aa15.67■□□□□ 0.1
CIITA-210ENST00000575513 PDGFCQ9NRA1 345 aa15.67■□□□□ 0.1
CIITA-210ENST00000575513 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.66■□□□□ 0.1
CIITA-210ENST00000575513 NR3C2P08235 984 aa15.66■□□□□ 0.1
CIITA-210ENST00000575513 CDC27P30260 824 aa15.66■□□□□ 0.1
CIITA-210ENST00000575513 SNX17Q15036 470 aa15.66■□□□□ 0.1
CIITA-210ENST00000575513 NOL8Q76FK4 1167 aaKnown RBP15.66■□□□□ 0.1
CIITA-210ENST00000575513 CCDC82Q8N4S0 544 aa15.66■□□□□ 0.1
CIITA-210ENST00000575513 PIBF1Q8WXW3 757 aa15.66■□□□□ 0.1
CIITA-210ENST00000575513 CUL5Q93034 780 aa15.66■□□□□ 0.1
CIITA-210ENST00000575513 ZNF274Q96GC6 653 aaPredicted RBP15.66■□□□□ 0.1
CIITA-210ENST00000575513 WDR11Q9BZH6 1224 aa15.66■□□□□ 0.1
CIITA-210ENST00000575513 AP5M1Q9H0R1 490 aa15.66■□□□□ 0.1
CIITA-210ENST00000575513 RBM27Q9P2N5 1060 aaKnown RBP15.66■□□□□ 0.1
CIITA-210ENST00000575513 DDX49Q9Y6V7 483 aaKnown RBP15.66■□□□□ 0.1
CIITA-210ENST00000575513 BAZ2BQ9UIF8 2168 aaKnown RBP15.66■□□□□ 0.1
CIITA-210ENST00000575513 CTAGE5O15320 804 aa15.65■□□□□ 0.1
CIITA-210ENST00000575513 C6orf222P0C671 652 aaPredicted RBP15.65■□□□□ 0.1
CIITA-210ENST00000575513 PDIA3P30101 505 aaKnown RBP15.65■□□□□ 0.1
CIITA-210ENST00000575513 HOXA13P31271 388 aaPredicted RBP15.65■□□□□ 0.1
CIITA-210ENST00000575513 ADD1P35611 737 aaKnown RBP15.65■□□□□ 0.1
CIITA-210ENST00000575513 ACLYP53396 1101 aa15.65■□□□□ 0.1
CIITA-210ENST00000575513 TOB2Q14106 344 aaPredicted RBP15.65■□□□□ 0.1
CIITA-210ENST00000575513 TTLL4Q14679 1199 aa15.65■□□□□ 0.1
CIITA-210ENST00000575513 KCNA10Q16322 511 aa15.65■□□□□ 0.1
CIITA-210ENST00000575513 GNASQ5JWF2 1037 aa15.65■□□□□ 0.1
CIITA-210ENST00000575513 SLC39A5Q6ZMH5 540 aa15.65■□□□□ 0.1
CIITA-210ENST00000575513 VSIG10LQ86VR7 867 aa15.65■□□□□ 0.1
CIITA-210ENST00000575513 LENG1Q96BZ8 264 aaPredicted RBP15.65■□□□□ 0.1
CIITA-210ENST00000575513 PDCD2LQ9BRP1 358 aa15.65■□□□□ 0.1
CIITA-210ENST00000575513 PSTPIP2Q9H939 334 aa15.65■□□□□ 0.1
CIITA-210ENST00000575513 PDRG1Q9NUG6 133 aa15.65■□□□□ 0.1
CIITA-210ENST00000575513 NAP1L2Q9ULW6 460 aaPredicted RBP15.65■□□□□ 0.1
CIITA-210ENST00000575513 V9GY48 417 aaPredicted RBP15.65■□□□□ 0.1
CIITA-210ENST00000575513 ELP1O95163 1332 aa15.65■□□□□ 0.1
CIITA-210ENST00000575513 CNTNAP5Q8WYK1 1306 aa15.65■□□□□ 0.1
CIITA-210ENST00000575513 MEIS2O14770 477 aa15.64■□□□□ 0.09
CIITA-210ENST00000575513 DYNC1LI2O43237 492 aaPredicted RBP15.64■□□□□ 0.09
CIITA-210ENST00000575513 ZEB2O60315 1214 aa15.64■□□□□ 0.09
CIITA-210ENST00000575513 STAM2O75886 525 aa15.64■□□□□ 0.09
CIITA-210ENST00000575513 MYCNP04198 464 aaPredicted RBP15.64■□□□□ 0.09
CIITA-210ENST00000575513 LRRC26Q2I0M4 334 aa15.64■□□□□ 0.09
CIITA-210ENST00000575513 PPP1R18Q6NYC8 613 aa15.64■□□□□ 0.09
CIITA-210ENST00000575513 XRRA1Q6P2D8 792 aa15.64■□□□□ 0.09
CIITA-210ENST00000575513 KCNV1Q6PIU1 500 aa15.64■□□□□ 0.09
CIITA-210ENST00000575513 TLK2Q86UE8 772 aa15.64■□□□□ 0.09
CIITA-210ENST00000575513 UPF3BQ9BZI7 483 aaKnown RBP15.64■□□□□ 0.09
CIITA-210ENST00000575513 GLT8D2Q9H1C3 349 aa15.64■□□□□ 0.09
CIITA-210ENST00000575513 LCTP09848 1927 aa15.64■□□□□ 0.09
CIITA-210ENST00000575513 FRMPD4Q14CM0 1322 aa15.64■□□□□ 0.09
CIITA-210ENST00000575513 MYH6P13533 1939 aa15.63■□□□□ 0.09
CIITA-210ENST00000575513 A0A1W2PQ45 241 aaPredicted RBP15.63■□□□□ 0.09
CIITA-210ENST00000575513 A0A1W2PQY0 241 aa15.63■□□□□ 0.09
CIITA-210ENST00000575513 H0YGN5 161 aa15.63■□□□□ 0.09
CIITA-210ENST00000575513 PRPF3O43395 683 aaKnown RBP15.63■□□□□ 0.09
CIITA-210ENST00000575513 CABYRO75952 493 aa15.63■□□□□ 0.09
CIITA-210ENST00000575513 TGFB3P10600 412 aa15.63■□□□□ 0.09
CIITA-210ENST00000575513 EIF2AK2P19525 551 aaKnown RBP15.63■□□□□ 0.09
CIITA-210ENST00000575513 PGM5Q15124 567 aa15.63■□□□□ 0.09
CIITA-210ENST00000575513 NTRK3Q16288 839 aa15.63■□□□□ 0.09
CIITA-210ENST00000575513 FSCN1Q16658 493 aaKnown RBP15.63■□□□□ 0.09
CIITA-210ENST00000575513 CCDC62Q6P9F0 684 aa15.63■□□□□ 0.09
CIITA-210ENST00000575513 HEATR3Q7Z4Q2 680 aa15.63■□□□□ 0.09
CIITA-210ENST00000575513 FCHSD1Q86WN1 690 aa15.63■□□□□ 0.09
CIITA-210ENST00000575513 SMARCC2Q8TAQ2 1214 aa15.63■□□□□ 0.09
CIITA-210ENST00000575513 GLT1D1Q96MS3 346 aa15.63■□□□□ 0.09
CIITA-210ENST00000575513 SEZ6LQ9BYH1 1024 aa15.63■□□□□ 0.09
CIITA-210ENST00000575513 BARHL2Q9NY43 387 aa15.63■□□□□ 0.09
CIITA-210ENST00000575513 FRMPD3Q5JV73 1810 aa15.63■□□□□ 0.09
CIITA-210ENST00000575513 MCM3APO60318 1980 aa15.62■□□□□ 0.09
CIITA-210ENST00000575513 hCG_1642624A0A1W2PR95 340 aa15.62■□□□□ 0.09
CIITA-210ENST00000575513 MYADML2A6NDP7 307 aa15.62■□□□□ 0.09
CIITA-210ENST00000575513 SEC24BO95487 1268 aa15.62■□□□□ 0.09
CIITA-210ENST00000575513 ASGR1P07306 291 aa15.62■□□□□ 0.09
CIITA-210ENST00000575513 TXNP10599 105 aaKnown RBP15.62■□□□□ 0.09
CIITA-210ENST00000575513 IFNAR1P17181 557 aa15.62■□□□□ 0.09
CIITA-210ENST00000575513 CCND2P30279 289 aa15.62■□□□□ 0.09
CIITA-210ENST00000575513 CPT1AP50416 773 aa15.62■□□□□ 0.09
CIITA-210ENST00000575513 ANKRD1Q15327 319 aa15.62■□□□□ 0.09
CIITA-210ENST00000575513 PFKFB3Q16875 520 aaPredicted RBP15.62■□□□□ 0.09
CIITA-210ENST00000575513 BRDTQ58F21 947 aaPredicted RBP15.62■□□□□ 0.09
CIITA-210ENST00000575513 WWC2Q6AWC2 1192 aa15.62■□□□□ 0.09
CIITA-210ENST00000575513 USP17L6PQ6QN14 398 aa15.62■□□□□ 0.09
CIITA-210ENST00000575513 FERMT2Q96AC1 680 aa15.62■□□□□ 0.09
CIITA-210ENST00000575513 A6NJR5 290 aa15.61■□□□□ 0.09
CIITA-210ENST00000575513 KPNA6O60684 536 aa15.61■□□□□ 0.09
CIITA-210ENST00000575513 ATN1P54259 1190 aaPredicted RBP15.61■□□□□ 0.09
CIITA-210ENST00000575513 RTP1P59025 263 aa15.61■□□□□ 0.09
CIITA-210ENST00000575513 TMEM63BQ5T3F8 832 aa15.61■□□□□ 0.09
CIITA-210ENST00000575513 SEPT14Q6ZU15 432 aa15.61■□□□□ 0.09
CIITA-210ENST00000575513 EMID1Q96A84 441 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms