RNA–Protein interactions for RNA: ENST00000575135.5

TVP23A-209, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,298 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-209ENST00000575135 PCDHA11Q9Y5I1 949 aa19.64■□□□□ 0.73
TVP23A-209ENST00000575135 NCOR1O75376 2440 aa19.64■□□□□ 0.73
TVP23A-209ENST00000575135 NEDD4P46934 1319 aa19.63■□□□□ 0.73
TVP23A-209ENST00000575135 RAD50Q92878 1312 aa19.63■□□□□ 0.73
TVP23A-209ENST00000575135 A6NJR5 290 aa19.63■□□□□ 0.73
TVP23A-209ENST00000575135 TXNP10599 105 aaKnown RBP19.63■□□□□ 0.73
TVP23A-209ENST00000575135 ATP2A2P16615 1042 aaKnown RBP19.63■□□□□ 0.73
TVP23A-209ENST00000575135 SDSP20132 328 aa19.63■□□□□ 0.73
TVP23A-209ENST00000575135 GPATCH4Q5T3I0 446 aaKnown RBP19.63■□□□□ 0.73
TVP23A-209ENST00000575135 PPP2R2DQ66LE6 453 aa19.63■□□□□ 0.73
TVP23A-209ENST00000575135 ESR2Q92731 530 aa19.63■□□□□ 0.73
TVP23A-209ENST00000575135 RNF41Q9H4P4 317 aaPredicted RBP19.63■□□□□ 0.73
TVP23A-209ENST00000575135 THEGQ9P2T0 379 aa19.63■□□□□ 0.73
TVP23A-209ENST00000575135 B4DLN1 442 aa19.62■□□□□ 0.73
TVP23A-209ENST00000575135 ZNF213O14771 459 aa19.62■□□□□ 0.73
TVP23A-209ENST00000575135 KPNA6O60684 536 aa19.62■□□□□ 0.73
TVP23A-209ENST00000575135 PFKMP08237 780 aa19.62■□□□□ 0.73
TVP23A-209ENST00000575135 MRPL12P52815 198 aaKnown RBP19.62■□□□□ 0.73
TVP23A-209ENST00000575135 B4GALNT3Q6L9W6 998 aa19.62■□□□□ 0.73
TVP23A-209ENST00000575135 NFRKBQ6P4R8 1299 aa19.62■□□□□ 0.73
TVP23A-209ENST00000575135 DGKHQ86XP1 1220 aa19.62■□□□□ 0.73
TVP23A-209ENST00000575135 RGS22Q8NE09 1264 aa19.62■□□□□ 0.73
TVP23A-209ENST00000575135 TBC1D5Q92609 795 aa19.62■□□□□ 0.73
TVP23A-209ENST00000575135 ASB2Q96Q27 587 aa19.62■□□□□ 0.73
TVP23A-209ENST00000575135 TNFRSF10AO00220 468 aa19.61■□□□□ 0.73
TVP23A-209ENST00000575135 ARIH2O95376 493 aa19.61■□□□□ 0.73
TVP23A-209ENST00000575135 MFAP1P55081 439 aaKnown RBP19.61■□□□□ 0.73
TVP23A-209ENST00000575135 IQCF3P0C7M6 154 aa19.6■□□□□ 0.73
TVP23A-209ENST00000575135 CHMP4BP1P59074 171 aa19.6■□□□□ 0.73
TVP23A-209ENST00000575135 CCDC62Q6P9F0 684 aa19.6■□□□□ 0.73
TVP23A-209ENST00000575135 RETREG2Q8NC44 543 aa19.6■□□□□ 0.73
TVP23A-209ENST00000575135 PNMA1Q8ND90 353 aa19.6■□□□□ 0.73
TVP23A-209ENST00000575135 PITPNM1O00562 1244 aa19.59■□□□□ 0.73
TVP23A-209ENST00000575135 KDM4AO75164 1064 aa19.59■□□□□ 0.73
TVP23A-209ENST00000575135 ACTN1P12814 892 aa19.59■□□□□ 0.73
TVP23A-209ENST00000575135 RFC2P35250 354 aa19.59■□□□□ 0.73
TVP23A-209ENST00000575135 MRPS5P82675 430 aaKnown RBP19.59■□□□□ 0.73
TVP23A-209ENST00000575135 PTPN11Q06124 597 aaPredicted RBP19.59■□□□□ 0.73
TVP23A-209ENST00000575135 CDC37Q16543 378 aaPredicted RBP19.59■□□□□ 0.73
TVP23A-209ENST00000575135 TMEM67Q5HYA8 995 aa19.59■□□□□ 0.73
TVP23A-209ENST00000575135 CWC27Q6UX04 472 aaKnown RBP19.59■□□□□ 0.73
TVP23A-209ENST00000575135 SEPT14Q6ZU15 432 aa19.59■□□□□ 0.73
TVP23A-209ENST00000575135 SMC5Q8IY18 1101 aa19.59■□□□□ 0.73
TVP23A-209ENST00000575135 TAAR1Q96RJ0 339 aa19.59■□□□□ 0.73
TVP23A-209ENST00000575135 COL20A1Q9P218 1284 aa19.59■□□□□ 0.73
TVP23A-209ENST00000575135 TET1Q8NFU7 2136 aa19.58■□□□□ 0.73
TVP23A-209ENST00000575135 TRIP12Q14669 1992 aaPredicted RBP19.58■□□□□ 0.73
TVP23A-209ENST00000575135 CA3P07451 260 aa19.58■□□□□ 0.72
TVP23A-209ENST00000575135 LY6KQ17RY6 165 aa19.58■□□□□ 0.72
TVP23A-209ENST00000575135 IQCA1Q86XH1 822 aa19.58■□□□□ 0.72
TVP23A-209ENST00000575135 PLEKHM2Q8IWE5 1019 aa19.58■□□□□ 0.72
TVP23A-209ENST00000575135 ADGRF4Q8IZF3 695 aa19.58■□□□□ 0.72
TVP23A-209ENST00000575135 SYTL5Q8TDW5 730 aaPredicted RBP19.58■□□□□ 0.72
TVP23A-209ENST00000575135 ADAMTS19Q8TE59 1207 aa19.58■□□□□ 0.72
TVP23A-209ENST00000575135 AFG1LQ8WV93 481 aa19.58■□□□□ 0.72
TVP23A-209ENST00000575135 ANKS1AQ92625 1134 aa19.58■□□□□ 0.72
TVP23A-209ENST00000575135 FTOQ9C0B1 505 aaKnown RBP eCLIP19.58■□□□□ 0.72
TVP23A-209ENST00000575135 KAT14Q9H8E8 782 aa19.58■□□□□ 0.72
TVP23A-209ENST00000575135 NOD1Q9Y239 953 aa19.58■□□□□ 0.72
TVP23A-209ENST00000575135 LAMA4Q16363 1823 aa19.58■□□□□ 0.72
TVP23A-209ENST00000575135 ABCB11O95342 1321 aa19.57■□□□□ 0.72
TVP23A-209ENST00000575135 B4E1Z4 1266 aa19.57■□□□□ 0.72
TVP23A-209ENST00000575135 RFXAPO00287 272 aa19.57■□□□□ 0.72
TVP23A-209ENST00000575135 BFSP2Q13515 415 aa19.57■□□□□ 0.72
TVP23A-209ENST00000575135 CCDC178Q5BJE1 867 aa19.57■□□□□ 0.72
TVP23A-209ENST00000575135 MICALL1Q8N3F8 863 aa19.57■□□□□ 0.72
TVP23A-209ENST00000575135 NSUN6Q8TEA1 469 aaKnown RBP19.57■□□□□ 0.72
TVP23A-209ENST00000575135 ZSCAN10Q96SZ4 725 aaPredicted RBP19.57■□□□□ 0.72
TVP23A-209ENST00000575135 MAF1Q9H063 256 aa19.57■□□□□ 0.72
TVP23A-209ENST00000575135 RWDD1Q9H446 243 aaPredicted RBP19.57■□□□□ 0.72
TVP23A-209ENST00000575135 CERS4Q9HA82 394 aa19.57■□□□□ 0.72
TVP23A-209ENST00000575135 PRRC2BQ5JSZ5 2229 aaKnown RBP19.57■□□□□ 0.72
TVP23A-209ENST00000575135 MYH6P13533 1939 aa19.57■□□□□ 0.72
TVP23A-209ENST00000575135 TANC1Q9C0D5 1861 aa19.56■□□□□ 0.72
TVP23A-209ENST00000575135 GH1P01241 217 aa19.56■□□□□ 0.72
TVP23A-209ENST00000575135 MMP3P08254 477 aa19.56■□□□□ 0.72
TVP23A-209ENST00000575135 NT5C2P49902 561 aa19.56■□□□□ 0.72
TVP23A-209ENST00000575135 ARHGAP1Q07960 439 aa19.56■□□□□ 0.72
TVP23A-209ENST00000575135 PTGISQ16647 500 aa19.56■□□□□ 0.72
TVP23A-209ENST00000575135 QRICH1Q2TAL8 776 aa19.56■□□□□ 0.72
TVP23A-209ENST00000575135 ASPRV1Q53RT3 343 aa19.56■□□□□ 0.72
TVP23A-209ENST00000575135 CHST3Q7LGC8 479 aa19.56■□□□□ 0.72
TVP23A-209ENST00000575135 CHD1LQ86WJ1 897 aa19.56■□□□□ 0.72
TVP23A-209ENST00000575135 ENAHQ8N8S7 591 aaPredicted RBP19.56■□□□□ 0.72
TVP23A-209ENST00000575135 PHOSPHO2Q8TCD6 241 aa19.56■□□□□ 0.72
TVP23A-209ENST00000575135 SLC9A7Q96T83 725 aa19.56■□□□□ 0.72
TVP23A-209ENST00000575135 RMDN3Q96TC7 470 aa19.56■□□□□ 0.72
TVP23A-209ENST00000575135 OSBPL3Q9H4L5 887 aa19.56■□□□□ 0.72
TVP23A-209ENST00000575135 VAT1LQ9HCJ6 419 aa19.56■□□□□ 0.72
TVP23A-209ENST00000575135 DIAPH3Q9NSV4 1193 aa19.56■□□□□ 0.72
TVP23A-209ENST00000575135 ZSWIM5Q9P217 1185 aa19.56■□□□□ 0.72
TVP23A-209ENST00000575135 KIAA1217Q5T5P2 1943 aa19.55■□□□□ 0.72
TVP23A-209ENST00000575135 DHX16O60231 1041 aaKnown RBP19.55■□□□□ 0.72
TVP23A-209ENST00000575135 IGHDP01880 384 aa19.55■□□□□ 0.72
TVP23A-209ENST00000575135 STXBP2Q15833 593 aa19.55■□□□□ 0.72
TVP23A-209ENST00000575135 GDF6Q6KF10 455 aaPredicted RBP19.55■□□□□ 0.72
TVP23A-209ENST00000575135 MCF2L2Q86YR7 1114 aa19.55■□□□□ 0.72
TVP23A-209ENST00000575135 KAT2BQ92831 832 aa19.55■□□□□ 0.72
TVP23A-209ENST00000575135 CTAGE1Q96RT6 745 aa19.55■□□□□ 0.72
TVP23A-209ENST00000575135 IWS1Q96ST2 819 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms