RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 KRT2P35908 639 aa19.56■□□□□ 0.72
NUP88-210ENST00000574867 LARP1BQ659C4 914 aaKnown RBP19.56■□□□□ 0.72
NUP88-210ENST00000574867 OLFML2BQ68BL8 750 aa19.56■□□□□ 0.72
NUP88-210ENST00000574867 FCHSD1Q86WN1 690 aa19.56■□□□□ 0.72
NUP88-210ENST00000574867 NPLOC4Q8TAT6 608 aa19.56■□□□□ 0.72
NUP88-210ENST00000574867 SOWAHBA6NEL2 793 aa19.56■□□□□ 0.72
NUP88-210ENST00000574867 ALDH5A1P51649 535 aaPredicted RBP19.56■□□□□ 0.72
NUP88-210ENST00000574867 FGD4Q96M96 766 aa19.56■□□□□ 0.72
NUP88-210ENST00000574867 TAAR1Q96RJ0 339 aa19.56■□□□□ 0.72
NUP88-210ENST00000574867 BIN2Q9UBW5 565 aaPredicted RBP19.56■□□□□ 0.72
NUP88-210ENST00000574867 LRRC37A2A6NM11 1700 aa19.56■□□□□ 0.72
NUP88-210ENST00000574867 ASB14A6NK59 587 aa19.55■□□□□ 0.72
NUP88-210ENST00000574867 H3BQV1 296 aa19.55■□□□□ 0.72
NUP88-210ENST00000574867 IFFO2Q5TF58 517 aa19.55■□□□□ 0.72
NUP88-210ENST00000574867 ARHGEF16Q5VV41 709 aa19.55■□□□□ 0.72
NUP88-210ENST00000574867 PXMP2Q9NR77 195 aa19.55■□□□□ 0.72
NUP88-210ENST00000574867 PCDHA6Q9UN73 950 aa19.55■□□□□ 0.72
NUP88-210ENST00000574867 PTPN22Q9Y2R2 807 aa19.55■□□□□ 0.72
NUP88-210ENST00000574867 PCDHA8Q9Y5H6 950 aa19.55■□□□□ 0.72
NUP88-210ENST00000574867 ASTN1O14525 1302 aa19.55■□□□□ 0.72
NUP88-210ENST00000574867 RPTORQ8N122 1335 aa19.55■□□□□ 0.72
NUP88-210ENST00000574867 SYNGAP1Q96PV0 1343 aa19.55■□□□□ 0.72
NUP88-210ENST00000574867 M0R2N6 131 aa19.55■□□□□ 0.72
NUP88-210ENST00000574867 PDIA4P13667 645 aaKnown RBP19.55■□□□□ 0.72
NUP88-210ENST00000574867 GUCY1B3Q02153 619 aa19.55■□□□□ 0.72
NUP88-210ENST00000574867 PKN2Q16513 984 aaKnown RBP19.55■□□□□ 0.72
NUP88-210ENST00000574867 MAMDC4Q6UXC1 1216 aa19.55■□□□□ 0.72
NUP88-210ENST00000574867 DIS3L2Q8IYB7 885 aaKnown RBP19.55■□□□□ 0.72
NUP88-210ENST00000574867 PXYLP1Q8TE99 480 aa19.55■□□□□ 0.72
NUP88-210ENST00000574867 PURBQ96QR8 312 aaKnown RBP19.55■□□□□ 0.72
NUP88-210ENST00000574867 IWS1Q96ST2 819 aa19.55■□□□□ 0.72
NUP88-210ENST00000574867 ANO3Q9BYT9 981 aa19.55■□□□□ 0.72
NUP88-210ENST00000574867 JAKMIP3Q5VZ66 844 aa19.54■□□□□ 0.72
NUP88-210ENST00000574867 KRT25Q7Z3Z0 450 aa19.54■□□□□ 0.72
NUP88-210ENST00000574867 SLAIN1Q8ND83 568 aa19.54■□□□□ 0.72
NUP88-210ENST00000574867 TMEM260Q9NX78 707 aa19.54■□□□□ 0.72
NUP88-210ENST00000574867 DAXXQ9UER7 740 aaPredicted RBP19.54■□□□□ 0.72
NUP88-210ENST00000574867 EDNRBP24530 442 aa19.53■□□□□ 0.72
NUP88-210ENST00000574867 SPRYD3Q8NCJ5 442 aa19.53■□□□□ 0.72
NUP88-210ENST00000574867 RASGRP4Q8TDF6 673 aa19.53■□□□□ 0.72
NUP88-210ENST00000574867 MORC4Q8TE76 937 aa19.53■□□□□ 0.72
NUP88-210ENST00000574867 PDCD2LQ9BRP1 358 aa19.53■□□□□ 0.72
NUP88-210ENST00000574867 TINF2Q9BSI4 451 aa19.53■□□□□ 0.72
NUP88-210ENST00000574867 ADAMTS3O15072 1205 aa19.53■□□□□ 0.72
NUP88-210ENST00000574867 ADCY3O60266 1144 aa19.53■□□□□ 0.72
NUP88-210ENST00000574867 EIF2AK2P19525 551 aaKnown RBP19.53■□□□□ 0.72
NUP88-210ENST00000574867 FOXP1Q9H334 677 aaPredicted RBP19.53■□□□□ 0.72
NUP88-210ENST00000574867 PTCH2Q9Y6C5 1203 aa19.53■□□□□ 0.72
NUP88-210ENST00000574867 SYT1P21579 422 aa19.52■□□□□ 0.72
NUP88-210ENST00000574867 GNL2Q13823 731 aaKnown RBP19.52■□□□□ 0.72
NUP88-210ENST00000574867 PGM5Q15124 567 aa19.52■□□□□ 0.72
NUP88-210ENST00000574867 CCL14Q16627 93 aa19.52■□□□□ 0.72
NUP88-210ENST00000574867 XRRA1Q6P2D8 792 aa19.52■□□□□ 0.72
NUP88-210ENST00000574867 ARMCX2Q7L311 632 aa19.52■□□□□ 0.72
NUP88-210ENST00000574867 OXER1Q8TDS5 423 aa19.52■□□□□ 0.72
NUP88-210ENST00000574867 TRIB2Q92519 343 aa19.52■□□□□ 0.72
NUP88-210ENST00000574867 CCDC194A0A1B0GVG4 234 aa19.52■□□□□ 0.71
NUP88-210ENST00000574867 BTBD18B2RXH4 712 aa19.52■□□□□ 0.71
NUP88-210ENST00000574867 IGHA2P01877 340 aa19.52■□□□□ 0.71
NUP88-210ENST00000574867 HMGCRP04035 888 aa19.52■□□□□ 0.71
NUP88-210ENST00000574867 SREBF1P36956 1147 aa19.52■□□□□ 0.71
NUP88-210ENST00000574867 FBXO46Q6PJ61 603 aaPredicted RBP19.52■□□□□ 0.71
NUP88-210ENST00000574867 TNFRSF25Q93038 417 aa19.52■□□□□ 0.71
NUP88-210ENST00000574867 FLRT1Q9NZU1 646 aa19.52■□□□□ 0.71
NUP88-210ENST00000574867 NR3C2P08235 984 aa19.51■□□□□ 0.71
NUP88-210ENST00000574867 CCND2P30279 289 aa19.51■□□□□ 0.71
NUP88-210ENST00000574867 PDE4DQ08499 809 aa19.51■□□□□ 0.71
NUP88-210ENST00000574867 NR5A1Q13285 461 aa19.51■□□□□ 0.71
NUP88-210ENST00000574867 NONOQ15233 471 aaKnown RBP eCLIP19.51■□□□□ 0.71
NUP88-210ENST00000574867 MFSD14CQ5VZR4 134 aa19.51■□□□□ 0.71
NUP88-210ENST00000574867 PCNX4Q63HM2 1172 aa19.51■□□□□ 0.71
NUP88-210ENST00000574867 PGBD1Q96JS3 809 aa19.51■□□□□ 0.71
NUP88-210ENST00000574867 MCM3APO60318 1980 aa19.51■□□□□ 0.71
NUP88-210ENST00000574867 VPS37CA5D8V6 355 aaPredicted RBP19.5■□□□□ 0.71
NUP88-210ENST00000574867 STAM2O75886 525 aa19.5■□□□□ 0.71
NUP88-210ENST00000574867 GRK4P32298 578 aa19.5■□□□□ 0.71
NUP88-210ENST00000574867 NRBP1Q9UHY1 535 aa19.5■□□□□ 0.71
NUP88-210ENST00000574867 MYH7BA7E2Y1 1941 aa19.5■□□□□ 0.71
NUP88-210ENST00000574867 STX6O43752 255 aa19.5■□□□□ 0.71
NUP88-210ENST00000574867 ELNP15502 786 aa19.5■□□□□ 0.71
NUP88-210ENST00000574867 U2AF2P26368 475 aaKnown RBP eCLIP19.5■□□□□ 0.716e-6■□□□□ 8.6
NUP88-210ENST00000574867 STXBP2Q15833 593 aa19.5■□□□□ 0.71
NUP88-210ENST00000574867 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.5■□□□□ 0.71
NUP88-210ENST00000574867 CNPY2Q9Y2B0 182 aa19.5■□□□□ 0.71
NUP88-210ENST00000574867 ARHGAP4P98171 946 aa19.49■□□□□ 0.71
NUP88-210ENST00000574867 VSIG10LQ86VR7 867 aa19.49■□□□□ 0.71
NUP88-210ENST00000574867 NOSTRINQ8IVI9 506 aa19.49■□□□□ 0.71
NUP88-210ENST00000574867 UBXN2AP68543 259 aa19.48■□□□□ 0.71
NUP88-210ENST00000574867 MCTP1Q6DN14 999 aa19.48■□□□□ 0.71
NUP88-210ENST00000574867 PIK3AP1Q6ZUJ8 805 aa19.48■□□□□ 0.71
NUP88-210ENST00000574867 IL31RAQ8NI17 732 aa19.48■□□□□ 0.71
NUP88-210ENST00000574867 TBCKQ8TEA7 893 aa19.48■□□□□ 0.71
NUP88-210ENST00000574867 CRYGNQ8WXF5 182 aa19.48■□□□□ 0.71
NUP88-210ENST00000574867 ABHD16BQ9H3Z7 469 aa19.48■□□□□ 0.71
NUP88-210ENST00000574867 VTA1Q9NP79 307 aa19.48■□□□□ 0.71
NUP88-210ENST00000574867 SNAI1O95863 264 aaPredicted RBP19.48■□□□□ 0.71
NUP88-210ENST00000574867 CYP3A4P08684 503 aa19.48■□□□□ 0.71
NUP88-210ENST00000574867 MYCLP12524 364 aaPredicted RBP19.48■□□□□ 0.71
NUP88-210ENST00000574867 CYP2C19P33261 490 aa19.48■□□□□ 0.71
NUP88-210ENST00000574867 SLC9C1Q4G0N8 1177 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms