RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 MRPL11Q9Y3B7 192 aaKnown RBP12.28□□□□□ -0.44
LITAF-216ENST00000574848 SCN10AQ9Y5Y9 1956 aa12.28□□□□□ -0.44
LITAF-216ENST00000574848 DCDC2CA8MYV0 355 aa12.27□□□□□ -0.45
LITAF-216ENST00000574848 B4DLN1 442 aa12.27□□□□□ -0.45
LITAF-216ENST00000574848 DDAH1O94760 285 aa12.27□□□□□ -0.45
LITAF-216ENST00000574848 PTGS1P23219 599 aa12.27□□□□□ -0.45
LITAF-216ENST00000574848 ITGB8P26012 769 aa12.27□□□□□ -0.45
LITAF-216ENST00000574848 MRPL12P52815 198 aaKnown RBP12.27□□□□□ -0.45
LITAF-216ENST00000574848 PDE4DQ08499 809 aa12.27□□□□□ -0.45
LITAF-216ENST00000574848 NECTIN1Q15223 517 aa12.27□□□□□ -0.45
LITAF-216ENST00000574848 TMEM63BQ5T3F8 832 aa12.27□□□□□ -0.45
LITAF-216ENST00000574848 SAMD3Q8N6K7 520 aa12.27□□□□□ -0.45
LITAF-216ENST00000574848 SCFD2Q8WU76 684 aa12.27□□□□□ -0.45
LITAF-216ENST00000574848 BADQ92934 168 aa12.27□□□□□ -0.45
LITAF-216ENST00000574848 KIF2CQ99661 725 aa12.27□□□□□ -0.45
LITAF-216ENST00000574848 WDR11Q9BZH6 1224 aa12.27□□□□□ -0.45
LITAF-216ENST00000574848 LY9Q9HBG7 655 aa12.27□□□□□ -0.45
LITAF-216ENST00000574848 MAP3K20Q9NYL2 800 aaKnown RBP12.27□□□□□ -0.45
LITAF-216ENST00000574848 SLC27A2O14975 620 aa12.26□□□□□ -0.45
LITAF-216ENST00000574848 DYNC1LI2O43237 492 aaPredicted RBP12.26□□□□□ -0.45
LITAF-216ENST00000574848 CYTH3O43739 400 aa12.26□□□□□ -0.45
LITAF-216ENST00000574848 DHX16O60231 1041 aaKnown RBP12.26□□□□□ -0.45
LITAF-216ENST00000574848 ZEB2O60315 1214 aa12.26□□□□□ -0.45
LITAF-216ENST00000574848 CD4P01730 458 aa12.26□□□□□ -0.45
LITAF-216ENST00000574848 TRAF1Q13077 416 aa12.26□□□□□ -0.45
LITAF-216ENST00000574848 PPP2R5BQ15173 497 aa12.26□□□□□ -0.45
LITAF-216ENST00000574848 TMEM67Q5HYA8 995 aa12.26□□□□□ -0.45
LITAF-216ENST00000574848 CXCL17Q6UXB2 119 aa12.26□□□□□ -0.45
LITAF-216ENST00000574848 NOL8Q76FK4 1167 aaKnown RBP12.26□□□□□ -0.45
LITAF-216ENST00000574848 NSUN6Q8TEA1 469 aaKnown RBP12.26□□□□□ -0.45
LITAF-216ENST00000574848 TBC1D5Q92609 795 aa12.26□□□□□ -0.45
LITAF-216ENST00000574848 IL17RAQ96F46 866 aa12.26□□□□□ -0.45
LITAF-216ENST00000574848 TMEM87BQ96K49 555 aa12.26□□□□□ -0.45
LITAF-216ENST00000574848 IWS1Q96ST2 819 aa12.26□□□□□ -0.45
LITAF-216ENST00000574848 TMEM39AQ9NV64 488 aa12.26□□□□□ -0.45
LITAF-216ENST00000574848 GRIN2DO15399 1336 aa12.26□□□□□ -0.45
LITAF-216ENST00000574848 LAMA2P24043 3122 aaKnown RBP12.26□□□□□ -0.45
LITAF-216ENST00000574848 A6NJR5 290 aa12.25□□□□□ -0.45
LITAF-216ENST00000574848 SH2B2O14492 632 aaPredicted RBP12.25□□□□□ -0.45
LITAF-216ENST00000574848 RAG1P15918 1043 aa12.25□□□□□ -0.45
LITAF-216ENST00000574848 SMARCA1P28370 1054 aa12.25□□□□□ -0.45
LITAF-216ENST00000574848 MCM5P33992 734 aa12.25□□□□□ -0.45
LITAF-216ENST00000574848 LIFRP42702 1097 aa12.25□□□□□ -0.45
LITAF-216ENST00000574848 CPT1AP50416 773 aa12.25□□□□□ -0.45
LITAF-216ENST00000574848 CREB3L3Q68CJ9 461 aa12.25□□□□□ -0.45
LITAF-216ENST00000574848 CCDC62Q6P9F0 684 aa12.25□□□□□ -0.45
LITAF-216ENST00000574848 CHST3Q7LGC8 479 aa12.25□□□□□ -0.45
LITAF-216ENST00000574848 CATIPQ7Z7H3 387 aa12.25□□□□□ -0.45
LITAF-216ENST00000574848 ZNF654Q8IZM8 581 aa12.25□□□□□ -0.45
LITAF-216ENST00000574848 TAAR1Q96RJ0 339 aa12.25□□□□□ -0.45
LITAF-216ENST00000574848 SPZ1Q9BXG8 430 aa12.25□□□□□ -0.45
LITAF-216ENST00000574848 POLR3EQ9NVU0 708 aa12.25□□□□□ -0.45
LITAF-216ENST00000574848 CHMP5Q9NZZ3 219 aa12.25□□□□□ -0.45
LITAF-216ENST00000574848 CIZ1Q9ULV3 898 aaPredicted RBP12.25□□□□□ -0.45
LITAF-216ENST00000574848 FRMPD4Q14CM0 1322 aa12.25□□□□□ -0.45
LITAF-216ENST00000574848 PNMA6FA0A0J9YX94 578 aa12.24□□□□□ -0.45
LITAF-216ENST00000574848 TLR3O15455 904 aaKnown RBP12.24□□□□□ -0.45
LITAF-216ENST00000574848 PRC1O43663 620 aa12.24□□□□□ -0.45
LITAF-216ENST00000574848 ARIH2O95376 493 aa12.24□□□□□ -0.45
LITAF-216ENST00000574848 TIMP1P01033 207 aa12.24□□□□□ -0.45
LITAF-216ENST00000574848 HSPA4P34932 840 aa12.24□□□□□ -0.45
LITAF-216ENST00000574848 PURAQ00577 322 aaKnown RBP12.24□□□□□ -0.45
LITAF-216ENST00000574848 FPGSQ05932 587 aa12.24□□□□□ -0.45
LITAF-216ENST00000574848 ITGA7Q13683 1181 aa12.24□□□□□ -0.45
LITAF-216ENST00000574848 COL9A3Q14050 684 aaPredicted RBP12.24□□□□□ -0.45
LITAF-216ENST00000574848 TTLL4Q14679 1199 aa12.24□□□□□ -0.45
LITAF-216ENST00000574848 SHHQ15465 462 aa12.24□□□□□ -0.45
LITAF-216ENST00000574848 C9orf50Q5SZB4 431 aa12.24□□□□□ -0.45
LITAF-216ENST00000574848 FAM109BQ6ICB4 259 aaPredicted RBP12.24□□□□□ -0.45
LITAF-216ENST00000574848 TMTC2Q8N394 836 aa12.24□□□□□ -0.45
LITAF-216ENST00000574848 OR6J1Q8NGC5 347 aa12.24□□□□□ -0.45
LITAF-216ENST00000574848 PIGSQ96S52 555 aa12.24□□□□□ -0.45
LITAF-216ENST00000574848 RMDN3Q96TC7 470 aa12.24□□□□□ -0.45
LITAF-216ENST00000574848 TANC1Q9C0D5 1861 aa12.24□□□□□ -0.45
LITAF-216ENST00000574848 SLKQ9H2G2 1235 aaPredicted RBP12.24□□□□□ -0.45
LITAF-216ENST00000574848 VAT1LQ9HCJ6 419 aa12.24□□□□□ -0.45
LITAF-216ENST00000574848 PXMP2Q9NR77 195 aa12.24□□□□□ -0.45
LITAF-216ENST00000574848 PCDHA1Q9Y5I3 950 aa12.24□□□□□ -0.45
LITAF-216ENST00000574848 KPNA6O60684 536 aa12.23□□□□□ -0.45
LITAF-216ENST00000574848 CFBP00751 764 aa12.23□□□□□ -0.45
LITAF-216ENST00000574848 KIF5BP33176 963 aa12.23□□□□□ -0.45
LITAF-216ENST00000574848 EPHB4P54760 987 aa12.23□□□□□ -0.45
LITAF-216ENST00000574848 STXBP2Q15833 593 aa12.23□□□□□ -0.45
LITAF-216ENST00000574848 TSGA10IPQ3SY00 556 aa12.23□□□□□ -0.45
LITAF-216ENST00000574848 RNF20Q5VTR2 975 aa12.23□□□□□ -0.45
LITAF-216ENST00000574848 MFSD5Q6N075 450 aa12.23□□□□□ -0.45
LITAF-216ENST00000574848 SGMS1Q86VZ5 419 aa12.23□□□□□ -0.45
LITAF-216ENST00000574848 HOMER1Q86YM7 354 aa12.23□□□□□ -0.45
LITAF-216ENST00000574848 CTCFLQ8NI51 663 aaPredicted RBP12.23□□□□□ -0.45
LITAF-216ENST00000574848 EMID1Q96A84 441 aaPredicted RBP12.23□□□□□ -0.45
LITAF-216ENST00000574848 LZTS2Q9BRK4 669 aa12.23□□□□□ -0.45
LITAF-216ENST00000574848 PDCD2LQ9BRP1 358 aa12.23□□□□□ -0.45
LITAF-216ENST00000574848 GPHNQ9NQX3 736 aaPredicted RBP12.23□□□□□ -0.45
LITAF-216ENST00000574848 BAZ2BQ9UIF8 2168 aaKnown RBP12.22□□□□□ -0.45
LITAF-216ENST00000574848 EIF3JO75822 258 aaKnown RBP12.22□□□□□ -0.45
LITAF-216ENST00000574848 NR3C2P08235 984 aa12.22□□□□□ -0.45
LITAF-216ENST00000574848 CALM1P0DP23 149 aa12.22□□□□□ -0.45
LITAF-216ENST00000574848 CALM2P0DP24 149 aa12.22□□□□□ -0.45
LITAF-216ENST00000574848 CALM3P0DP25 149 aa12.22□□□□□ -0.45
LITAF-216ENST00000574848 TXNP10599 105 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms