RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 SCFD2Q8WU76 684 aa17.8■□□□□ 0.44
CTNS-209ENST00000574776 SCLYQ96I15 445 aa17.8■□□□□ 0.44
CTNS-209ENST00000574776 TAAR1Q96RJ0 339 aa17.8■□□□□ 0.44
CTNS-209ENST00000574776 CTNNA3Q9UI47 895 aa17.8■□□□□ 0.44
CTNS-209ENST00000574776 TNKSO95271 1327 aa17.79■□□□□ 0.44
CTNS-209ENST00000574776 SUPT20HL2P0C7V6 817 aa17.79■□□□□ 0.44
CTNS-209ENST00000574776 NBPF20Q3BBV1 942 aa17.79■□□□□ 0.44
CTNS-209ENST00000574776 FAM47CQ5HY64 1035 aa17.79■□□□□ 0.44
CTNS-209ENST00000574776 MTIF3Q9H2K0 278 aaKnown RBP17.79■□□□□ 0.44
CTNS-209ENST00000574776 MSRAQ9UJ68 235 aa17.79■□□□□ 0.44
CTNS-209ENST00000574776 ABCB11O95342 1321 aa17.78■□□□□ 0.44
CTNS-209ENST00000574776 A6NJR5 290 aa17.78■□□□□ 0.44
CTNS-209ENST00000574776 DHX16O60231 1041 aaKnown RBP17.78■□□□□ 0.44
CTNS-209ENST00000574776 ARIH2O95376 493 aa17.78■□□□□ 0.44
CTNS-209ENST00000574776 PARP1P09874 1014 aaKnown RBP17.78■□□□□ 0.44
CTNS-209ENST00000574776 TTLL4Q14679 1199 aa17.78■□□□□ 0.44
CTNS-209ENST00000574776 ASPRV1Q53RT3 343 aa17.78■□□□□ 0.44
CTNS-209ENST00000574776 SYTL5Q8TDW5 730 aaPredicted RBP17.78■□□□□ 0.44
CTNS-209ENST00000574776 VWCEQ96DN2 955 aa17.78■□□□□ 0.44
CTNS-209ENST00000574776 KRT23Q9C075 422 aa17.78■□□□□ 0.44
CTNS-209ENST00000574776 IL25Q9H293 177 aa17.78■□□□□ 0.44
CTNS-209ENST00000574776 PRDM12Q9H4Q4 367 aa17.78■□□□□ 0.44
CTNS-209ENST00000574776 JMJD4Q9H9V9 463 aa17.78■□□□□ 0.44
CTNS-209ENST00000574776 COL20A1Q9P218 1284 aa17.78■□□□□ 0.44
CTNS-209ENST00000574776 RAD50Q92878 1312 aa17.77■□□□□ 0.44
CTNS-209ENST00000574776 KPNA6O60684 536 aa17.77■□□□□ 0.44
CTNS-209ENST00000574776 CHMP4BP1P59074 171 aa17.77■□□□□ 0.44
CTNS-209ENST00000574776 RAB30Q15771 203 aa17.77■□□□□ 0.44
CTNS-209ENST00000574776 QRICH1Q2TAL8 776 aa17.77■□□□□ 0.44
CTNS-209ENST00000574776 SEPT14Q6ZU15 432 aa17.77■□□□□ 0.44
CTNS-209ENST00000574776 FBXO11Q86XK2 927 aa17.77■□□□□ 0.44
CTNS-209ENST00000574776 MCF2L2Q86YR7 1114 aa17.77■□□□□ 0.44
CTNS-209ENST00000574776 USP38Q8NB14 1042 aa17.77■□□□□ 0.44
CTNS-209ENST00000574776 UBAC1Q9BSL1 405 aa17.77■□□□□ 0.44
CTNS-209ENST00000574776 NKX2-4Q9H2Z4 354 aa17.77■□□□□ 0.44
CTNS-209ENST00000574776 RABGGTBP53611 331 aa17.76■□□□□ 0.43
CTNS-209ENST00000574776 LY6KQ17RY6 165 aa17.76■□□□□ 0.43
CTNS-209ENST00000574776 CCDC62Q6P9F0 684 aa17.76■□□□□ 0.43
CTNS-209ENST00000574776 DEFB128Q7Z7B8 93 aa17.76■□□□□ 0.43
CTNS-209ENST00000574776 STAG2Q8N3U4 1231 aa17.76■□□□□ 0.43
CTNS-209ENST00000574776 NSUN6Q8TEA1 469 aaKnown RBP17.76■□□□□ 0.43
CTNS-209ENST00000574776 PPM1EQ8WY54 764 aa17.76■□□□□ 0.43
CTNS-209ENST00000574776 RMDN3Q96TC7 470 aa17.76■□□□□ 0.43
CTNS-209ENST00000574776 GAS2L1Q99501 681 aaPredicted RBP17.76■□□□□ 0.43
CTNS-209ENST00000574776 MAF1Q9H063 256 aa17.76■□□□□ 0.43
CTNS-209ENST00000574776 CNNM2Q9H8M5 875 aa17.76■□□□□ 0.43
CTNS-209ENST00000574776 YBX2Q9Y2T7 364 aaKnown RBP17.76■□□□□ 0.43
CTNS-209ENST00000574776 MRPL11Q9Y3B7 192 aaKnown RBP17.76■□□□□ 0.43
CTNS-209ENST00000574776 SLC4A7Q9Y6M7 1214 aa17.76■□□□□ 0.43
CTNS-209ENST00000574776 LAMA4Q16363 1823 aa17.76■□□□□ 0.43
CTNS-209ENST00000574776 ZBBXA8MT70 800 aa17.75■□□□□ 0.43
CTNS-209ENST00000574776 PDE4AP27815 886 aa17.75■□□□□ 0.43
CTNS-209ENST00000574776 STXBP2Q15833 593 aa17.75■□□□□ 0.43
CTNS-209ENST00000574776 IFIT1BQ5T764 474 aaKnown RBP17.75■□□□□ 0.43
CTNS-209ENST00000574776 NFRKBQ6P4R8 1299 aa17.75■□□□□ 0.43
CTNS-209ENST00000574776 AFG1LQ8WV93 481 aa17.75■□□□□ 0.43
CTNS-209ENST00000574776 IWS1Q96ST2 819 aa17.75■□□□□ 0.43
CTNS-209ENST00000574776 SLC28A3Q9HAS3 691 aa17.75■□□□□ 0.43
CTNS-209ENST00000574776 VCANP13611 3396 aa17.75■□□□□ 0.43
CTNS-209ENST00000574776 SCN10AQ9Y5Y9 1956 aa17.75■□□□□ 0.43
CTNS-209ENST00000574776 CFBP00751 764 aa17.74■□□□□ 0.43
CTNS-209ENST00000574776 ARHGEF16Q5VV41 709 aa17.74■□□□□ 0.43
CTNS-209ENST00000574776 CYB5R4Q7L1T6 521 aa17.74■□□□□ 0.43
CTNS-209ENST00000574776 CHST3Q7LGC8 479 aa17.74■□□□□ 0.43
CTNS-209ENST00000574776 RETREG2Q8NC44 543 aa17.74■□□□□ 0.43
CTNS-209ENST00000574776 SUPT16HQ9Y5B9 1047 aaKnown RBP17.74■□□□□ 0.43
CTNS-209ENST00000574776 CHD9Q3L8U1 2897 aa17.74■□□□□ 0.43
CTNS-209ENST00000574776 MYH6P13533 1939 aa17.74■□□□□ 0.43
CTNS-209ENST00000574776 SCN5AQ14524 2016 aa17.73■□□□□ 0.43
CTNS-209ENST00000574776 KLRF2D3W0D1 207 aa17.73■□□□□ 0.43
CTNS-209ENST00000574776 GH1P01241 217 aa17.73■□□□□ 0.43
CTNS-209ENST00000574776 GSPT1P15170 499 aaKnown RBP17.73■□□□□ 0.43
CTNS-209ENST00000574776 MYOGP15173 224 aa17.73■□□□□ 0.43
CTNS-209ENST00000574776 EIF2AK2P19525 551 aaKnown RBP17.73■□□□□ 0.43
CTNS-209ENST00000574776 PTPN11Q06124 597 aaPredicted RBP17.73■□□□□ 0.43
CTNS-209ENST00000574776 ADGRE1Q14246 886 aa17.73■□□□□ 0.43
CTNS-209ENST00000574776 SEC23AQ15436 765 aa17.73■□□□□ 0.43
CTNS-209ENST00000574776 AMNQ9BXJ7 453 aa17.73■□□□□ 0.43
CTNS-209ENST00000574776 PRDM6Q9NQX0 595 aa17.73■□□□□ 0.43
CTNS-209ENST00000574776 GBF1Q92538 1859 aa17.73■□□□□ 0.43
CTNS-209ENST00000574776 EIF3JO75822 258 aaKnown RBP17.72■□□□□ 0.43
CTNS-209ENST00000574776 NR3C2P08235 984 aa17.72■□□□□ 0.43
CTNS-209ENST00000574776 PFKMP08237 780 aa17.72■□□□□ 0.43
CTNS-209ENST00000574776 MMP3P08254 477 aa17.72■□□□□ 0.43
CTNS-209ENST00000574776 IQCF3P0C7M6 154 aa17.72■□□□□ 0.43
CTNS-209ENST00000574776 ATP2A2P16615 1042 aaKnown RBP17.72■□□□□ 0.43
CTNS-209ENST00000574776 IGFBP4P22692 258 aa17.72■□□□□ 0.43
CTNS-209ENST00000574776 ARHGAP1Q07960 439 aa17.72■□□□□ 0.43
CTNS-209ENST00000574776 TTC22Q5TAA0 569 aa17.72■□□□□ 0.43
CTNS-209ENST00000574776 MAD2L2Q9UI95 211 aa17.72■□□□□ 0.43
CTNS-209ENST00000574776 DDX41Q9UJV9 622 aaKnown RBP17.72■□□□□ 0.43
CTNS-209ENST00000574776 NOD1Q9Y239 953 aa17.72■□□□□ 0.43
CTNS-209ENST00000574776 PALM3A6NDB9 673 aaPredicted RBP17.71■□□□□ 0.43
CTNS-209ENST00000574776 OPLAHO14841 1288 aa17.71■□□□□ 0.43
CTNS-209ENST00000574776 PPP1R11O60927 126 aaPredicted RBP17.71■□□□□ 0.43
CTNS-209ENST00000574776 CASTP20810 708 aaKnown RBP17.71■□□□□ 0.43
CTNS-209ENST00000574776 PTH1RQ03431 593 aa17.71■□□□□ 0.43
CTNS-209ENST00000574776 TRDNQ13061 729 aa17.71■□□□□ 0.43
CTNS-209ENST00000574776 CCDC85BQ15834 202 aaPredicted RBP17.71■□□□□ 0.43
CTNS-209ENST00000574776 PTGISQ16647 500 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms