RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 SCLYQ96I15 445 aa14.26□□□□□ -0.13
CCDC40-210ENST00000573903 MAF1Q9H063 256 aa14.26□□□□□ -0.13
CCDC40-210ENST00000573903 NKX2-4Q9H2Z4 354 aa14.26□□□□□ -0.13
CCDC40-210ENST00000573903 TRMT13Q9NUP7 481 aaKnown RBP14.26□□□□□ -0.13
CCDC40-210ENST00000573903 NOD1Q9Y239 953 aa14.26□□□□□ -0.13
CCDC40-210ENST00000573903 ABCB11O95342 1321 aa14.25□□□□□ -0.13
CCDC40-210ENST00000573903 KDM4AO75164 1064 aa14.25□□□□□ -0.13
CCDC40-210ENST00000573903 CYP2C9P11712 490 aa14.25□□□□□ -0.13
CCDC40-210ENST00000573903 IGFBP4P22692 258 aa14.25□□□□□ -0.13
CCDC40-210ENST00000573903 EDNRBP24530 442 aa14.25□□□□□ -0.13
CCDC40-210ENST00000573903 IMMTQ16891 758 aaKnown RBP14.25□□□□□ -0.13
CCDC40-210ENST00000573903 ASPRV1Q53RT3 343 aa14.25□□□□□ -0.13
CCDC40-210ENST00000573903 PPP2R2DQ66LE6 453 aa14.25□□□□□ -0.13
CCDC40-210ENST00000573903 MCF2L2Q86YR7 1114 aa14.25□□□□□ -0.13
CCDC40-210ENST00000573903 USP38Q8NB14 1042 aa14.25□□□□□ -0.13
CCDC40-210ENST00000573903 RETREG2Q8NC44 543 aa14.25□□□□□ -0.13
CCDC40-210ENST00000573903 RGS22Q8NE09 1264 aa14.25□□□□□ -0.13
CCDC40-210ENST00000573903 UBA5Q9GZZ9 404 aa14.25□□□□□ -0.13
CCDC40-210ENST00000573903 CUL9Q8IWT3 2517 aa14.25□□□□□ -0.13
CCDC40-210ENST00000573903 SCN10AQ9Y5Y9 1956 aa14.25□□□□□ -0.13
CCDC40-210ENST00000573903 TANC1Q9C0D5 1861 aa14.25□□□□□ -0.13
CCDC40-210ENST00000573903 ATP2A2P16615 1042 aaKnown RBP14.24□□□□□ -0.13
CCDC40-210ENST00000573903 RFC2P35250 354 aa14.24□□□□□ -0.13
CCDC40-210ENST00000573903 CHMP4BP1P59074 171 aa14.24□□□□□ -0.13
CCDC40-210ENST00000573903 PTPN11Q06124 597 aaPredicted RBP14.24□□□□□ -0.13
CCDC40-210ENST00000573903 NBPF20Q3BBV1 942 aa14.24□□□□□ -0.13
CCDC40-210ENST00000573903 NFRKBQ6P4R8 1299 aa14.24□□□□□ -0.13
CCDC40-210ENST00000573903 DEFB128Q7Z7B8 93 aa14.24□□□□□ -0.13
CCDC40-210ENST00000573903 CCDC155Q8N6L0 562 aa14.24□□□□□ -0.13
CCDC40-210ENST00000573903 ZSCAN10Q96SZ4 725 aaPredicted RBP14.24□□□□□ -0.13
CCDC40-210ENST00000573903 UBAC1Q9BSL1 405 aa14.24□□□□□ -0.13
CCDC40-210ENST00000573903 KRT23Q9C075 422 aa14.24□□□□□ -0.13
CCDC40-210ENST00000573903 OSBPL3Q9H4L5 887 aa14.24□□□□□ -0.13
CCDC40-210ENST00000573903 THEGQ9P2T0 379 aa14.24□□□□□ -0.13
CCDC40-210ENST00000573903 CTNNA3Q9UI47 895 aa14.24□□□□□ -0.13
CCDC40-210ENST00000573903 PCDHA11Q9Y5I1 949 aa14.24□□□□□ -0.13
CCDC40-210ENST00000573903 A6NJR5 290 aa14.23□□□□□ -0.13
CCDC40-210ENST00000573903 B4E1Z4 1266 aa14.23□□□□□ -0.13
CCDC40-210ENST00000573903 PITPNM1O00562 1244 aa14.23□□□□□ -0.13
CCDC40-210ENST00000573903 PARP1P09874 1014 aaKnown RBP14.23□□□□□ -0.13
CCDC40-210ENST00000573903 BFSP2Q13515 415 aa14.23□□□□□ -0.13
CCDC40-210ENST00000573903 PLEKHM2Q8IWE5 1019 aa14.23□□□□□ -0.13
CCDC40-210ENST00000573903 IL27Q8NEV9 243 aa14.23□□□□□ -0.13
CCDC40-210ENST00000573903 NSUN6Q8TEA1 469 aaKnown RBP14.23□□□□□ -0.13
CCDC40-210ENST00000573903 COPS5Q92905 334 aa14.23□□□□□ -0.13
CCDC40-210ENST00000573903 DSCC1Q9BVC3 393 aa14.23□□□□□ -0.13
CCDC40-210ENST00000573903 TSPYL2Q9H2G4 693 aaPredicted RBP14.23□□□□□ -0.13
CCDC40-210ENST00000573903 CPVLQ9H3G5 476 aa14.23□□□□□ -0.13
CCDC40-210ENST00000573903 CNNM2Q9H8M5 875 aa14.23□□□□□ -0.13
CCDC40-210ENST00000573903 YBX2Q9Y2T7 364 aaKnown RBP14.23□□□□□ -0.13
CCDC40-210ENST00000573903 MRPL11Q9Y3B7 192 aaKnown RBP14.23□□□□□ -0.13
CCDC40-210ENST00000573903 SCN5AQ14524 2016 aa14.22□□□□□ -0.13
CCDC40-210ENST00000573903 KIAA1217Q5T5P2 1943 aa14.22□□□□□ -0.13
CCDC40-210ENST00000573903 GH1P01241 217 aa14.22□□□□□ -0.13
CCDC40-210ENST00000573903 RABGGTBP53611 331 aa14.22□□□□□ -0.13
CCDC40-210ENST00000573903 NUCB1Q02818 461 aa14.22□□□□□ -0.13
CCDC40-210ENST00000573903 STXBP2Q15833 593 aa14.22□□□□□ -0.13
CCDC40-210ENST00000573903 SEPT14Q6ZU15 432 aa14.22□□□□□ -0.13
CCDC40-210ENST00000573903 FBXO11Q86XK2 927 aa14.22□□□□□ -0.13
CCDC40-210ENST00000573903 ADGRF4Q8IZF3 695 aa14.22□□□□□ -0.13
CCDC40-210ENST00000573903 ATXN2LQ8WWM7 1075 aaKnown RBP14.22□□□□□ -0.13
CCDC40-210ENST00000573903 IWS1Q96ST2 819 aa14.22□□□□□ -0.13
CCDC40-210ENST00000573903 SLC9A7Q96T83 725 aa14.22□□□□□ -0.13
CCDC40-210ENST00000573903 FTOQ9C0B1 505 aaKnown RBP eCLIP14.22□□□□□ -0.13
CCDC40-210ENST00000573903 CCDC85BQ15834 202 aaPredicted RBP14.21□□□□□ -0.13
CCDC40-210ENST00000573903 QRICH1Q2TAL8 776 aa14.21□□□□□ -0.13
CCDC40-210ENST00000573903 TMEM67Q5HYA8 995 aa14.21□□□□□ -0.13
CCDC40-210ENST00000573903 IFIT1BQ5T764 474 aaKnown RBP14.21□□□□□ -0.13
CCDC40-210ENST00000573903 ARHGEF16Q5VV41 709 aa14.21□□□□□ -0.13
CCDC40-210ENST00000573903 ENAHQ8N8S7 591 aaPredicted RBP14.21□□□□□ -0.13
CCDC40-210ENST00000573903 SYTL5Q8TDW5 730 aaPredicted RBP14.21□□□□□ -0.13
CCDC40-210ENST00000573903 ANKS1AQ92625 1134 aa14.21□□□□□ -0.13
CCDC40-210ENST00000573903 RMDN3Q96TC7 470 aa14.21□□□□□ -0.13
CCDC40-210ENST00000573903 MYO9BQ13459 2157 aa14.21□□□□□ -0.13
CCDC40-210ENST00000573903 KIF28PB7ZC32 967 aa14.2□□□□□ -0.14
CCDC40-210ENST00000573903 ARIH2O95376 493 aa14.2□□□□□ -0.14
CCDC40-210ENST00000573903 IGHDP01880 384 aa14.2□□□□□ -0.14
CCDC40-210ENST00000573903 MMP3P08254 477 aa14.2□□□□□ -0.14
CCDC40-210ENST00000573903 CASTP20810 708 aaKnown RBP14.2□□□□□ -0.14
CCDC40-210ENST00000573903 ADGRE1Q14246 886 aa14.2□□□□□ -0.14
CCDC40-210ENST00000573903 PTGISQ16647 500 aa14.2□□□□□ -0.14
CCDC40-210ENST00000573903 CHST3Q7LGC8 479 aa14.2□□□□□ -0.14
CCDC40-210ENST00000573903 MICALL1Q8N3F8 863 aa14.2□□□□□ -0.14
CCDC40-210ENST00000573903 CAGE1Q8TC20 777 aa14.2□□□□□ -0.14
CCDC40-210ENST00000573903 AFG1LQ8WV93 481 aa14.2□□□□□ -0.14
CCDC40-210ENST00000573903 TAAR1Q96RJ0 339 aa14.2□□□□□ -0.14
CCDC40-210ENST00000573903 KATNAL1Q9BW62 490 aa14.2□□□□□ -0.14
CCDC40-210ENST00000573903 AMNQ9BXJ7 453 aa14.2□□□□□ -0.14
CCDC40-210ENST00000573903 VAT1LQ9HCJ6 419 aa14.2□□□□□ -0.14
CCDC40-210ENST00000573903 PRDM6Q9NQX0 595 aa14.2□□□□□ -0.14
CCDC40-210ENST00000573903 ZSWIM5Q9P217 1185 aa14.2□□□□□ -0.14
CCDC40-210ENST00000573903 PRUNE2Q8WUY3 3088 aa14.2□□□□□ -0.14
CCDC40-210ENST00000573903 GTPBP6O43824 516 aaPredicted RBP14.19□□□□□ -0.14
CCDC40-210ENST00000573903 CFBP00751 764 aa14.19□□□□□ -0.14
CCDC40-210ENST00000573903 IQCF3P0C7M6 154 aa14.19□□□□□ -0.14
CCDC40-210ENST00000573903 EIF2AK2P19525 551 aaKnown RBP14.19□□□□□ -0.14
CCDC40-210ENST00000573903 KCNJ6P48051 423 aa14.19□□□□□ -0.14
CCDC40-210ENST00000573903 MRPS5P82675 430 aaKnown RBP14.19□□□□□ -0.14
CCDC40-210ENST00000573903 TRDNQ13061 729 aa14.19□□□□□ -0.14
CCDC40-210ENST00000573903 DGKDQ16760 1214 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms