RNA–Protein interactions for RNA: ENST00000573667.1

ABR-222, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-222	ENST00000573667	CPT1A	P50416	773 aa		13.84	□□□□□ -0.19
ABR-222	ENST00000573667	KRT32	Q14532	448 aa		13.84	□□□□□ -0.19
ABR-222	ENST00000573667	TTLL4	Q14679	1199 aa		13.84	□□□□□ -0.19
ABR-222	ENST00000573667	STXBP2	Q15833	593 aa		13.84	□□□□□ -0.19
ABR-222	ENST00000573667	SYNE3	Q6ZMZ3	975 aa		13.84	□□□□□ -0.19
ABR-222	ENST00000573667	ANKRD33	Q7Z3H0	272 aa		13.84	□□□□□ -0.19
ABR-222	ENST00000573667	OR6J1	Q8NGC5	347 aa		13.84	□□□□□ -0.19
ABR-222	ENST00000573667	RRP36	Q96EU6	259 aa	Known RBP	13.84	□□□□□ -0.19
ABR-222	ENST00000573667	TOX2	Q96NM4	488 aa		13.84	□□□□□ -0.19
ABR-222	ENST00000573667	LZTS2	Q9BRK4	669 aa		13.84	□□□□□ -0.19
ABR-222	ENST00000573667	TMEM39A	Q9NV64	488 aa		13.84	□□□□□ -0.19
ABR-222	ENST00000573667	SEC63	Q9UGP8	760 aa	Known RBP	13.84	□□□□□ -0.19
ABR-222	ENST00000573667	SLC12A7	Q9Y666	1083 aa		13.84	□□□□□ -0.19
ABR-222	ENST00000573667	DOCK5	Q9H7D0	1870 aa		13.83	□□□□□ -0.2
ABR-222	ENST00000573667	ARVCF	O00192	962 aa		13.83	□□□□□ -0.2
ABR-222	ENST00000573667	CTAGE5	O15320	804 aa		13.83	□□□□□ -0.2
ABR-222	ENST00000573667	CYTH3	O43739	400 aa		13.83	□□□□□ -0.2
ABR-222	ENST00000573667	PPP1R11	O60927	126 aa	Predicted RBP	13.83	□□□□□ -0.2
ABR-222	ENST00000573667	CENPB	P07199	599 aa	Predicted RBP	13.83	□□□□□ -0.2
ABR-222	ENST00000573667	TXN	P10599	105 aa	Known RBP	13.83	□□□□□ -0.2
ABR-222	ENST00000573667	EIF2AK2	P19525	551 aa	Known RBP	13.83	□□□□□ -0.2
ABR-222	ENST00000573667	SMARCA1	P28370	1054 aa		13.83	□□□□□ -0.2
ABR-222	ENST00000573667	HSD17B4	P51659	736 aa		13.83	□□□□□ -0.2
ABR-222	ENST00000573667	CXCL17	Q6UXB2	119 aa		13.83	□□□□□ -0.2
ABR-222	ENST00000573667	SH3RF1	Q7Z6J0	888 aa		13.83	□□□□□ -0.2
ABR-222	ENST00000573667	PIBF1	Q8WXW3	757 aa		13.83	□□□□□ -0.2
ABR-222	ENST00000573667	SPZ1	Q9BXG8	430 aa		13.83	□□□□□ -0.2
ABR-222	ENST00000573667	GPHN	Q9NQX3	736 aa	Predicted RBP	13.83	□□□□□ -0.2
ABR-222	ENST00000573667	POLR3E	Q9NVU0	708 aa		13.83	□□□□□ -0.2
ABR-222	ENST00000573667	COL20A1	Q9P218	1284 aa		13.83	□□□□□ -0.2
ABR-222	ENST00000573667	PCDH10	Q9P2E7	1040 aa		13.83	□□□□□ -0.2
ABR-222	ENST00000573667	TRIM43B	A6NCK2	446 aa		13.82	□□□□□ -0.2
ABR-222	ENST00000573667	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.82	□□□□□ -0.2
ABR-222	ENST00000573667	HMGB1	P09429	215 aa	Known RBP	13.82	□□□□□ -0.2
ABR-222	ENST00000573667	POLR2M	P0CAP2	368 aa		13.82	□□□□□ -0.2
ABR-222	ENST00000573667	TMEM63B	Q5T3F8	832 aa		13.82	□□□□□ -0.2
ABR-222	ENST00000573667	SEPT14	Q6ZU15	432 aa		13.82	□□□□□ -0.2
ABR-222	ENST00000573667	BAD	Q92934	168 aa		13.82	□□□□□ -0.2
ABR-222	ENST00000573667	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.82	□□□□□ -0.2
ABR-222	ENST00000573667	SEZ6L	Q9BYH1	1024 aa		13.82	□□□□□ -0.2
ABR-222	ENST00000573667	LRRC2	Q9BYS8	371 aa		13.82	□□□□□ -0.2
ABR-222	ENST00000573667	PXMP2	Q9NR77	195 aa		13.82	□□□□□ -0.2
ABR-222	ENST00000573667	OPLAH	O14841	1288 aa		13.81	□□□□□ -0.2
ABR-222	ENST00000573667	KIAA0355	O15063	1070 aa		13.81	□□□□□ -0.2
ABR-222	ENST00000573667	EIF3J	O75822	258 aa	Known RBP	13.81	□□□□□ -0.2
ABR-222	ENST00000573667	REC8	O95072	547 aa		13.81	□□□□□ -0.2
ABR-222	ENST00000573667	NR3C2	P08235	984 aa		13.81	□□□□□ -0.2
ABR-222	ENST00000573667	RXRA	P19793	462 aa		13.81	□□□□□ -0.2
ABR-222	ENST00000573667	PTGS1	P23219	599 aa		13.81	□□□□□ -0.2
ABR-222	ENST00000573667	HOXA13	P31271	388 aa	Predicted RBP	13.81	□□□□□ -0.2
ABR-222	ENST00000573667	CDK7	P50613	346 aa		13.81	□□□□□ -0.2
ABR-222	ENST00000573667	FGD1	P98174	961 aa		13.81	□□□□□ -0.2
ABR-222	ENST00000573667	GHRHR	Q02643	423 aa		13.81	□□□□□ -0.2
ABR-222	ENST00000573667	FAAP100	Q0VG06	881 aa		13.81	□□□□□ -0.2
ABR-222	ENST00000573667	ITGA7	Q13683	1181 aa		13.81	□□□□□ -0.2
ABR-222	ENST00000573667	TSGA10IP	Q3SY00	556 aa		13.81	□□□□□ -0.2
ABR-222	ENST00000573667	DHX32	Q7L7V1	743 aa	Known RBP	13.81	□□□□□ -0.2
ABR-222	ENST00000573667	SCN10A	Q9Y5Y9	1956 aa		13.81	□□□□□ -0.2
ABR-222	ENST00000573667	KPNA6	O60684	536 aa		13.8	□□□□□ -0.2
ABR-222	ENST00000573667	MYL3	P08590	195 aa		13.8	□□□□□ -0.2
ABR-222	ENST00000573667	MYCL	P12524	364 aa	Predicted RBP	13.8	□□□□□ -0.2
ABR-222	ENST00000573667	SLC35G1	Q2M3R5	365 aa		13.8	□□□□□ -0.2
ABR-222	ENST00000573667	LRIT3	Q3SXY7	679 aa		13.8	□□□□□ -0.2
ABR-222	ENST00000573667	ERICH6B	Q5W0A0	696 aa		13.8	□□□□□ -0.2
ABR-222	ENST00000573667	SGMS1	Q86VZ5	419 aa		13.8	□□□□□ -0.2
ABR-222	ENST00000573667	FCHSD1	Q86WN1	690 aa		13.8	□□□□□ -0.2
ABR-222	ENST00000573667	MICU3	Q86XE3	530 aa		13.8	□□□□□ -0.2
ABR-222	ENST00000573667	FAM126B	Q8IXS8	530 aa		13.8	□□□□□ -0.2
ABR-222	ENST00000573667	FANCB	Q8NB91	859 aa		13.8	□□□□□ -0.2
ABR-222	ENST00000573667	SMARCC2	Q8TAQ2	1214 aa		13.8	□□□□□ -0.2
ABR-222	ENST00000573667	CUL5	Q93034	780 aa		13.8	□□□□□ -0.2
ABR-222	ENST00000573667	RBM28	Q9NW13	759 aa	Known RBP	13.8	□□□□□ -0.2
ABR-222	ENST00000573667	PPP4R2	Q9NY27	417 aa		13.8	□□□□□ -0.2
ABR-222	ENST00000573667	MRVI1	Q9Y6F6	885 aa		13.8	□□□□□ -0.2
ABR-222	ENST00000573667	PLEKHA8P1	O95397	391 aa		13.79	□□□□□ -0.2
ABR-222	ENST00000573667	GH1	P01241	217 aa		13.79	□□□□□ -0.2
ABR-222	ENST00000573667	PURA	Q00577	322 aa	Known RBP	13.79	□□□□□ -0.2
ABR-222	ENST00000573667	FPGS	Q05932	587 aa		13.79	□□□□□ -0.2
ABR-222	ENST00000573667	PGM5	Q15124	567 aa		13.79	□□□□□ -0.2
ABR-222	ENST00000573667	LY6K	Q17RY6	165 aa		13.79	□□□□□ -0.2
ABR-222	ENST00000573667	ADCK5	Q3MIX3	580 aa		13.79	□□□□□ -0.2
ABR-222	ENST00000573667	KCNV1	Q6PIU1	500 aa		13.79	□□□□□ -0.2
ABR-222	ENST00000573667	RAB11FIP4	Q86YS3	637 aa		13.79	□□□□□ -0.2
ABR-222	ENST00000573667	RASEF	Q8IZ41	740 aa		13.79	□□□□□ -0.2
ABR-222	ENST00000573667	SRBD1	Q8N5C6	995 aa	Known RBP	13.79	□□□□□ -0.2
ABR-222	ENST00000573667	COPS5	Q92905	334 aa		13.79	□□□□□ -0.2
ABR-222	ENST00000573667	TCEANC2	Q96MN5	208 aa		13.79	□□□□□ -0.2
ABR-222	ENST00000573667	PDCD2L	Q9BRP1	358 aa		13.79	□□□□□ -0.2
ABR-222	ENST00000573667	MTG1	Q9BT17	334 aa	Predicted RBP	13.79	□□□□□ -0.2
ABR-222	ENST00000573667	TRIP12	Q14669	1992 aa	Predicted RBP	13.79	□□□□□ -0.2
ABR-222	ENST00000573667	SOX1	O00570	391 aa	Predicted RBP	13.78	□□□□□ -0.2
ABR-222	ENST00000573667	ZBTB43	O43298	467 aa		13.78	□□□□□ -0.2
ABR-222	ENST00000573667	ARIH2	O95376	493 aa		13.78	□□□□□ -0.2
ABR-222	ENST00000573667	TIMP1	P01033	207 aa		13.78	□□□□□ -0.2
ABR-222	ENST00000573667	CCND2	P30279	289 aa		13.78	□□□□□ -0.2
ABR-222	ENST00000573667	HSPA4	P34932	840 aa		13.78	□□□□□ -0.2
ABR-222	ENST00000573667	PSMC6	P62333	389 aa		13.78	□□□□□ -0.2
ABR-222	ENST00000573667	EXOSC10	Q01780	885 aa	Known RBP	13.78	□□□□□ -0.2
ABR-222	ENST00000573667	COL9A3	Q14050	684 aa	Predicted RBP	13.78	□□□□□ -0.2
ABR-222	ENST00000573667	CCDC62	Q6P9F0	684 aa		13.78	□□□□□ -0.2

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