RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 DDX19BQ9UMR2 479 aa9.65□□□□□ -0.86
NPLOC4-211ENST00000573212 PCDHA11Q9Y5I1 949 aa9.65□□□□□ -0.86
NPLOC4-211ENST00000573212 COL11A1P12107 1806 aaPredicted RBP9.65□□□□□ -0.86
NPLOC4-211ENST00000573212 CHD9Q3L8U1 2897 aa9.65□□□□□ -0.87
NPLOC4-211ENST00000573212 POM121CA8CG34 1229 aa9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 ERC2O15083 957 aa9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 RNF113AO15541 343 aaKnown RBP9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 ZEB2O60315 1214 aa9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 PRDM1O75626 825 aa9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 NUDT7P0C024 238 aa9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 TLK2Q86UE8 772 aa9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 FAM160B2Q86V87 743 aa9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 IFNL3Q8IZI9 196 aa9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 LRRC47Q8N1G4 583 aaKnown RBP9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 APPBP2Q92624 585 aa9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 SCLYQ96I15 445 aa9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 GMCL1Q96IK5 515 aa9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 NECAB3Q96P71 396 aaPredicted RBP9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 TRERF1Q96PN7 1200 aa9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 AP5M1Q9H0R1 490 aa9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 BCL11AQ9H165 835 aa9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 ALDH8A1Q9H2A2 487 aaPredicted RBP9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 ZNF287Q9HBT7 754 aa9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 RNF146Q9NTX7 359 aa9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 MTCH2Q9Y6C9 303 aa9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 SLC4A7Q9Y6M7 1214 aa9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 DDX49Q9Y6V7 483 aaKnown RBP9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 GREB1LQ9C091 1923 aaPredicted RBP9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 PLXNA1Q9UIW2 1896 aa9.64□□□□□ -0.87
NPLOC4-211ENST00000573212 RBM47A0AV96 593 aaKnown RBP9.63□□□□□ -0.87
NPLOC4-211ENST00000573212 RFXAPO00287 272 aa9.63□□□□□ -0.87
NPLOC4-211ENST00000573212 GPAA1O43292 621 aa9.63□□□□□ -0.87
NPLOC4-211ENST00000573212 TLL1O43897 1013 aa9.63□□□□□ -0.87
NPLOC4-211ENST00000573212 GNAT2P19087 354 aa9.63□□□□□ -0.87
NPLOC4-211ENST00000573212 NOVP48745 357 aa9.63□□□□□ -0.87
NPLOC4-211ENST00000573212 STAT2P52630 851 aa9.63□□□□□ -0.87
NPLOC4-211ENST00000573212 PSMC6P62333 389 aa9.63□□□□□ -0.87
NPLOC4-211ENST00000573212 HNRNPUQ00839 825 aaKnown RBP eCLIP9.63□□□□□ -0.87
NPLOC4-211ENST00000573212 TFAP4Q01664 338 aa9.63□□□□□ -0.87
NPLOC4-211ENST00000573212 TFF2Q03403 129 aa9.63□□□□□ -0.87
NPLOC4-211ENST00000573212 TTLL4Q14679 1199 aa9.63□□□□□ -0.87
NPLOC4-211ENST00000573212 DUSP28Q4G0W2 176 aa9.63□□□□□ -0.87
NPLOC4-211ENST00000573212 RCSD1Q6JBY9 416 aa9.63□□□□□ -0.87
NPLOC4-211ENST00000573212 NOL8Q76FK4 1167 aaKnown RBP9.63□□□□□ -0.87
NPLOC4-211ENST00000573212 KHSRPQ92945 711 aaKnown RBP eCLIP9.63□□□□□ -0.87
NPLOC4-211ENST00000573212 C1QTNF1Q9BXJ1 281 aa9.63□□□□□ -0.87
NPLOC4-211ENST00000573212 LRRCC1Q9C099 1032 aa9.63□□□□□ -0.87
NPLOC4-211ENST00000573212 HOMER2Q9NSB8 354 aa9.63□□□□□ -0.87
NPLOC4-211ENST00000573212 ECHDC1Q9NTX5 307 aa9.63□□□□□ -0.87
NPLOC4-211ENST00000573212 CYP39A1Q9NYL5 469 aa9.63□□□□□ -0.87
NPLOC4-211ENST00000573212 PLIN4Q96Q06 1357 aa9.63□□□□□ -0.87
NPLOC4-211ENST00000573212 M0R2C6 588 aa9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 SMARCA5O60264 1052 aaPredicted RBP9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 ZFYP08048 801 aaPredicted RBP9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 PFKMP08237 780 aa9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 SUPT20HL2P0C7V6 817 aa9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 ALAS1P13196 640 aa9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 ATP2A2P16615 1042 aaKnown RBP9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 NDUFV2P19404 249 aa9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 MCCP23508 829 aa9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 CSPP1Q1MSJ5 1256 aa9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 AAK1Q2M2I8 961 aa9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 MUM1L1Q5H9M0 696 aa9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 TMEM67Q5HYA8 995 aa9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 KIAA1211Q6ZU35 1233 aa9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 ZNF710Q8N1W2 664 aa9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 PHOSPHO2Q8TCD6 241 aa9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 FAM122AQ96E09 287 aa9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 PURBQ96QR8 312 aaKnown RBP9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 EPHX3Q9H6B9 360 aa9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 VTA1Q9NP79 307 aa9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 IL17RBQ9NRM6 502 aa9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 PRR12Q9ULL5 1215 aa9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 PCDHB15Q9Y5E8 787 aa9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 BAZ2AQ9UIF9 1905 aaKnown RBP9.62□□□□□ -0.87
NPLOC4-211ENST00000573212 LOC102724159A0A0B4J2E5 919 aa9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 EPOPA6NHQ4 379 aa9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 DDX11L8A8MPP1 907 aa9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 C3orf80F5H4A9 247 aa9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 AP1G2O75843 785 aa9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 ARHGEF15O94989 841 aa9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 TSPY3P0CV98 308 aa9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 TSPY8P0CW00 308 aa9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 CYP2C9P11712 490 aa9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 SLC1A4P43007 532 aa9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 KCNQ1P51787 676 aa9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 PURAQ00577 322 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 TAP1Q03518 808 aa9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 PWP2Q15269 919 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 KCTD1Q719H9 257 aa9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 EEPD1Q7L9B9 569 aa9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 FBXO16Q8IX29 292 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 SEC62Q99442 399 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 LRFN3Q9BTN0 628 aa9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 CHMP4BQ9H444 224 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 TMEM134Q9H6X4 195 aa9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 TRMT13Q9NUP7 481 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 COG5Q9UP83 839 aa9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.61□□□□□ -0.87
NPLOC4-211ENST00000573212 BDP1A6H8Y1 2624 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms