RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 CNBD1Q8NA66 436 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 PLBD2Q8NHP8 589 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 ZNF274Q96GC6 653 aaPredicted RBP11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 ZNF496Q96IT1 587 aaPredicted RBP11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 SYNCQ9H7C4 482 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 ZSWIM4Q9H7M6 989 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 SEL1LQ9UBV2 794 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 PRELID1Q9Y255 219 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 ECM29Q5VYK3 1845 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 CTAGE15A4D2H0 777 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 SPDYE5A6NIY4 337 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 UNCXA6NJT0 531 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 PRC1O43663 620 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 RHOXF2BP0C7M4 288 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 CTAGE8P0CG41 777 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 EPB41P11171 864 aaKnown RBP11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 CCT6AP40227 531 aaKnown RBP11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 STAT6P42226 847 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 KIF5AQ12840 1032 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 ADAM9Q13443 819 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 CMPK2Q5EBM0 449 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 ZMYM1Q5SVZ6 1142 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 ZNF554Q86TJ5 538 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 CTAGE6Q86UF2 777 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 EXOC3L1Q86VI1 746 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 DHX40Q8IX18 779 aaKnown RBP11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 CTAGE4Q8IX94 777 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 STK11IPQ8N1F8 1099 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 TTC30BQ8N4P2 665 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 KRI1Q8N9T8 703 aaKnown RBP11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 DCAF5Q96JK2 942 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 SNX27Q96L92 541 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 SMC6Q96SB8 1091 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 SEC62Q99442 399 aaKnown RBP11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 RHOXF2Q9BQY4 288 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 SLC7A5P2Q9GIP4 190 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 PAG1Q9NWQ8 432 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 SLAIN2Q9P270 581 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 EFR3BQ9Y2G0 817 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 R3HDM2Q9Y2K5 976 aaKnown RBP11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 SLC4A7Q9Y6M7 1214 aa11.56□□□□□ -0.56
CHRNB1-205ENST00000573209 A0A087WZG4 1122 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 TRIM43BA6NCK2 446 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 CTDNEP1O95476 244 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 FAM107AO95990 144 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 LDHAP00338 332 aaKnown RBP11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 C11orf57Q6ZUT1 292 aaPredicted RBP11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 SLC7A5P1Q8MH63 180 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 ENGASEQ8NFI3 743 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 DEPTORQ8TB45 409 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 RIN2Q8WYP3 895 aaPredicted RBP11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 FAM167BQ9BTA0 163 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 EIF2AQ9BY44 585 aaKnown RBP11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 PUS3Q9BZE2 481 aaKnown RBP11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 BHMT2Q9H2M3 363 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 VCXQ9H320 206 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 OCEL1Q9H607 264 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 DKK3Q9UBP4 350 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 CARD8Q9Y2G2 431 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 C1orf167Q5SNV9 1468 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 CARMIL3Q8ND23 1372 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 TMEM110-MUSTN1A8MSY1 372 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 AGPSO00116 658 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 AKR1B10O60218 316 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 FUT4P22083 530 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 CCND1P24385 295 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 LSP1P33241 339 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 CD97P48960 835 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 GSTM4Q03013 218 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 PDCLQ13371 301 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 KRT28Q7Z3Y7 464 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 GIMAP1Q8WWP7 306 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 NAF1Q96HR8 494 aaKnown RBP11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 UIMC1Q96RL1 719 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 USP28Q96RU2 1077 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 SEZ6LQ9BYH1 1024 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 CCDC68Q9H2F9 335 aa11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 MRPL46Q9H2W6 279 aaKnown RBP11.55□□□□□ -0.56
CHRNB1-205ENST00000573209 GOLGA6L10A0A0M3HER8 536 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 A0A1W2PQ27 194 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 A0A1W2PQ64 194 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 A0A1W2PQD8 194 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 DNM1LO00429 736 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 BIRC5O15392 142 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 ALADP13716 330 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 CSE1LP55060 971 aaKnown RBP11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 PLOD1Q02809 727 aaPredicted RBP11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 SEPT2Q15019 361 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 CNGA3Q16281 694 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 ALS2CLQ60I27 953 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 POTEEQ6S8J3 1075 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 UBE2Q1Q7Z7E8 422 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 NLRP14Q86W24 1093 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 CCDC148Q8NFR7 591 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 MYCBPAPQ8TBZ2 947 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 ATP6V0A1Q93050 837 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 NACAP1Q9BZK3 213 aa11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 SUCLA2Q9P2R7 463 aaPredicted RBP11.54□□□□□ -0.56
CHRNB1-205ENST00000573209 HESX1Q9UBX0 185 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms