RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 AOPEPQ8N6M6 819 aa23.19■■□□□ 1.3
CHRNE-202ENST00000572438 TBC1D5Q92609 795 aa23.19■■□□□ 1.3
CHRNE-202ENST00000572438 TTC12Q9H892 705 aaPredicted RBP23.19■■□□□ 1.3
CHRNE-202ENST00000572438 AFG3L2Q9Y4W6 797 aa23.19■■□□□ 1.3
CHRNE-202ENST00000572438 SNCAIPQ9Y6H5 919 aa23.19■■□□□ 1.3
CHRNE-202ENST00000572438 MARCH6O60337 910 aa23.18■■□□□ 1.3
CHRNE-202ENST00000572438 CYP3A4P08684 503 aa23.18■■□□□ 1.3
CHRNE-202ENST00000572438 VGLL4Q14135 290 aa23.18■■□□□ 1.3
CHRNE-202ENST00000572438 MORC3Q14149 939 aa23.18■■□□□ 1.3
CHRNE-202ENST00000572438 MMTAG2Q9BU76 263 aaKnown RBP23.18■■□□□ 1.3
CHRNE-202ENST00000572438 KCNMB3Q9NPA1 279 aa23.18■■□□□ 1.3
CHRNE-202ENST00000572438 PNMA2Q9UL42 364 aa23.18■■□□□ 1.3
CHRNE-202ENST00000572438 GTPBP6O43824 516 aaPredicted RBP23.17■■□□□ 1.3
CHRNE-202ENST00000572438 ZBED4O75132 1171 aa23.17■■□□□ 1.3
CHRNE-202ENST00000572438 BMP6P22004 513 aa23.17■■□□□ 1.3
CHRNE-202ENST00000572438 CIITAP33076 1130 aa23.17■■□□□ 1.3
CHRNE-202ENST00000572438 Q4G0T1 1027 aa23.17■■□□□ 1.3
CHRNE-202ENST00000572438 MTRQ99707 1265 aa23.17■■□□□ 1.3
CHRNE-202ENST00000572438 CUEDC2Q9H467 287 aa23.17■■□□□ 1.3
CHRNE-202ENST00000572438 GSDMAQ96QA5 445 aa23.17■■□□□ 1.3
CHRNE-202ENST00000572438 RAVER2Q9HCJ3 691 aaKnown RBP23.17■■□□□ 1.3
CHRNE-202ENST00000572438 TMOD4Q9NZQ9 345 aa23.17■■□□□ 1.3
CHRNE-202ENST00000572438 CTDP1Q9Y5B0 961 aaPredicted RBP23.17■■□□□ 1.3
CHRNE-202ENST00000572438 PHIPQ8WWQ0 1821 aa23.16■■□□□ 1.3
CHRNE-202ENST00000572438 PLCG1P19174 1290 aa23.16■■□□□ 1.3
CHRNE-202ENST00000572438 CASP1P29466 404 aa23.16■■□□□ 1.3
CHRNE-202ENST00000572438 IREB2P48200 963 aaKnown RBP23.16■■□□□ 1.3
CHRNE-202ENST00000572438 CPXCR1Q8N123 301 aa23.16■■□□□ 1.3
CHRNE-202ENST00000572438 STAMQ92783 540 aa23.16■■□□□ 1.3
CHRNE-202ENST00000572438 TRIM44Q96DX7 344 aaPredicted RBP23.16■■□□□ 1.3
CHRNE-202ENST00000572438 CDCA5Q96FF9 252 aa23.16■■□□□ 1.3
CHRNE-202ENST00000572438 CALML4Q96GE6 196 aa23.16■■□□□ 1.3
CHRNE-202ENST00000572438 EHMT1Q9H9B1 1298 aa23.16■■□□□ 1.3
CHRNE-202ENST00000572438 MAGEF1Q9HAY2 307 aa23.16■■□□□ 1.3
CHRNE-202ENST00000572438 CSADQ9Y600 493 aa23.16■■□□□ 1.3
CHRNE-202ENST00000572438 IQCA1LA6NCM1 817 aa23.15■■□□□ 1.3
CHRNE-202ENST00000572438 VWA5AO00534 786 aa23.15■■□□□ 1.3
CHRNE-202ENST00000572438 TBX3O15119 743 aa23.15■■□□□ 1.3
CHRNE-202ENST00000572438 HSD17B4P51659 736 aa23.15■■□□□ 1.3
CHRNE-202ENST00000572438 PRR16Q569H4 304 aa23.15■■□□□ 1.3
CHRNE-202ENST00000572438 SLFN12Q8IYM2 578 aa23.15■■□□□ 1.3
CHRNE-202ENST00000572438 MLKLQ8NB16 471 aa23.15■■□□□ 1.3
CHRNE-202ENST00000572438 RBM46Q8TBY0 533 aaKnown RBP23.15■■□□□ 1.3
CHRNE-202ENST00000572438 CLEC4DQ8WXI8 215 aa23.15■■□□□ 1.3
CHRNE-202ENST00000572438 PLIN2Q99541 437 aa23.15■■□□□ 1.3
CHRNE-202ENST00000572438 TAF1DQ9H5J8 278 aaPredicted RBP23.15■■□□□ 1.3
CHRNE-202ENST00000572438 PCDHA12Q9UN75 941 aa23.15■■□□□ 1.3
CHRNE-202ENST00000572438 SMCHD1A6NHR9 2005 aa23.15■■□□□ 1.3
CHRNE-202ENST00000572438 POTEMA6NI47 508 aa23.15■■□□□ 1.3
CHRNE-202ENST00000572438 FAM86B1E9PN63 330 aa23.15■■□□□ 1.3
CHRNE-202ENST00000572438 FAM86B2P0C5J1 330 aa23.15■■□□□ 1.3
CHRNE-202ENST00000572438 NF2P35240 595 aa23.15■■□□□ 1.3
CHRNE-202ENST00000572438 GHRHRQ02643 423 aa23.15■■□□□ 1.3
CHRNE-202ENST00000572438 SH3D19Q5HYK7 790 aa23.15■■□□□ 1.3
CHRNE-202ENST00000572438 MCF2L2Q86YR7 1114 aa23.15■■□□□ 1.3
CHRNE-202ENST00000572438 LENG9Q96B70 501 aa23.15■■□□□ 1.3
CHRNE-202ENST00000572438 ATG4CQ96DT6 458 aa23.15■■□□□ 1.3
CHRNE-202ENST00000572438 DACH1Q9UI36 760 aa23.15■■□□□ 1.3
CHRNE-202ENST00000572438 SMTNL1A8MU46 457 aa23.14■■□□□ 1.29
CHRNE-202ENST00000572438 IKBKBO14920 756 aa23.14■■□□□ 1.29
CHRNE-202ENST00000572438 ALAS1P13196 640 aa23.14■■□□□ 1.29
CHRNE-202ENST00000572438 KRT79Q5XKE5 535 aa23.14■■□□□ 1.29
CHRNE-202ENST00000572438 ETNPPLQ8TBG4 499 aa23.14■■□□□ 1.29
CHRNE-202ENST00000572438 BLZF1Q9H2G9 400 aa23.14■■□□□ 1.29
CHRNE-202ENST00000572438 KBTBD4Q9NVX7 518 aa23.14■■□□□ 1.29
CHRNE-202ENST00000572438 DCAF8L1A6NGE4 600 aa23.13■■□□□ 1.29
CHRNE-202ENST00000572438 MYL1P05976 194 aa23.13■■□□□ 1.29
CHRNE-202ENST00000572438 CUL4BQ13620 913 aa23.13■■□□□ 1.29
CHRNE-202ENST00000572438 LRRC15Q8TF66 581 aa23.13■■□□□ 1.29
CHRNE-202ENST00000572438 GJA10Q969M2 543 aa23.13■■□□□ 1.29
CHRNE-202ENST00000572438 PAPPA2Q9BXP8 1791 aa23.13■■□□□ 1.29
CHRNE-202ENST00000572438 NFIBO00712 420 aa23.12■■□□□ 1.29
CHRNE-202ENST00000572438 DSG3P32926 999 aa23.12■■□□□ 1.29
CHRNE-202ENST00000572438 ZNF76P36508 570 aa23.12■■□□□ 1.29
CHRNE-202ENST00000572438 COG2Q14746 738 aa23.12■■□□□ 1.29
CHRNE-202ENST00000572438 SARM1Q6SZW1 724 aa23.12■■□□□ 1.29
CHRNE-202ENST00000572438 CATSPERGQ6ZRH7 1159 aa23.12■■□□□ 1.29
CHRNE-202ENST00000572438 SNX29Q8TEQ0 813 aa23.12■■□□□ 1.29
CHRNE-202ENST00000572438 ADAMTS5Q9UNA0 930 aa23.12■■□□□ 1.29
CHRNE-202ENST00000572438 GRB10Q13322 594 aa23.12■■□□□ 1.29
CHRNE-202ENST00000572438 NCAPHQ15003 741 aa23.12■■□□□ 1.29
CHRNE-202ENST00000572438 EAPPQ56P03 285 aaPredicted RBP23.12■■□□□ 1.29
CHRNE-202ENST00000572438 SAMD3Q8N6K7 520 aa23.12■■□□□ 1.29
CHRNE-202ENST00000572438 FAM20AQ96MK3 541 aa23.12■■□□□ 1.29
CHRNE-202ENST00000572438 PNMA5Q96PV4 448 aa23.12■■□□□ 1.29
CHRNE-202ENST00000572438 POTECB2RU33 542 aa23.11■■□□□ 1.29
CHRNE-202ENST00000572438 TPM4P67936 248 aa23.11■■□□□ 1.29
CHRNE-202ENST00000572438 MYL5Q02045 173 aa23.11■■□□□ 1.29
CHRNE-202ENST00000572438 PNMA8AQ86V59 439 aaPredicted RBP23.11■■□□□ 1.29
CHRNE-202ENST00000572438 REPS2Q8NFH8 660 aa23.11■■□□□ 1.29
CHRNE-202ENST00000572438 WNK4Q96J92 1243 aa23.11■■□□□ 1.29
CHRNE-202ENST00000572438 CDK5RAP3Q96JB5 506 aa23.11■■□□□ 1.29
CHRNE-202ENST00000572438 MAP3K20Q9NYL2 800 aaKnown RBP23.11■■□□□ 1.29
CHRNE-202ENST00000572438 STK17AQ9UEE5 414 aa23.11■■□□□ 1.29
CHRNE-202ENST00000572438 SCN4AP35499 1836 aa23.11■■□□□ 1.29
CHRNE-202ENST00000572438 IGLV3-22A0A075B6J6 115 aa23.1■■□□□ 1.29
CHRNE-202ENST00000572438 OAZ1P54368 228 aa23.1■■□□□ 1.29
CHRNE-202ENST00000572438 MUM1L1Q5H9M0 696 aa23.1■■□□□ 1.29
CHRNE-202ENST00000572438 CT47A1Q5JQC4 288 aaPredicted RBP23.1■■□□□ 1.29
CHRNE-202ENST00000572438 ANKRD13AQ8IZ07 590 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms