RNA–Protein interactions for RNA: ENST00000571309.1

PSMB6-202, Transcript of proteasome subunit beta 6, humanhuman

TSL 3

Gene PSMB6, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB6-202ENST00000571309 TIFAQ96CG3 184 aa16.09■□□□□ 0.17
PSMB6-202ENST00000571309 PBX4Q9BYU1 374 aa16.09■□□□□ 0.17
PSMB6-202ENST00000571309 ZNF576Q9H609 170 aa16.09■□□□□ 0.17
PSMB6-202ENST00000571309 JMJD4Q9H9V9 463 aa16.09■□□□□ 0.17
PSMB6-202ENST00000571309 GPHNQ9NQX3 736 aaPredicted RBP16.09■□□□□ 0.17
PSMB6-202ENST00000571309 COL20A1Q9P218 1284 aa16.09■□□□□ 0.17
PSMB6-202ENST00000571309 SUPT16HQ9Y5B9 1047 aaKnown RBP16.09■□□□□ 0.17
PSMB6-202ENST00000571309 RAD50Q92878 1312 aa16.09■□□□□ 0.17
PSMB6-202ENST00000571309 MYH6P13533 1939 aa16.09■□□□□ 0.17
PSMB6-202ENST00000571309 GRXCR1A8MXD5 290 aa16.08■□□□□ 0.16
PSMB6-202ENST00000571309 ARIH2O95376 493 aa16.08■□□□□ 0.16
PSMB6-202ENST00000571309 FGBP02675 491 aa16.08■□□□□ 0.16
PSMB6-202ENST00000571309 SUPT20HL2P0C7V6 817 aa16.08■□□□□ 0.16
PSMB6-202ENST00000571309 TXNP10599 105 aaKnown RBP16.08■□□□□ 0.16
PSMB6-202ENST00000571309 CCL23P55773 120 aa16.08■□□□□ 0.16
PSMB6-202ENST00000571309 TTLL4Q14679 1199 aa16.08■□□□□ 0.16
PSMB6-202ENST00000571309 SEC23AQ15436 765 aa16.08■□□□□ 0.16
PSMB6-202ENST00000571309 IFIT1BQ5T764 474 aaKnown RBP16.08■□□□□ 0.16
PSMB6-202ENST00000571309 CCDC62Q6P9F0 684 aa16.08■□□□□ 0.16
PSMB6-202ENST00000571309 FBXO11Q86XK2 927 aa16.08■□□□□ 0.16
PSMB6-202ENST00000571309 MCF2L2Q86YR7 1114 aa16.08■□□□□ 0.16
PSMB6-202ENST00000571309 NSUN6Q8TEA1 469 aaKnown RBP16.08■□□□□ 0.16
PSMB6-202ENST00000571309 COPS5Q92905 334 aa16.08■□□□□ 0.16
PSMB6-202ENST00000571309 TAAR1Q96RJ0 339 aa16.08■□□□□ 0.16
PSMB6-202ENST00000571309 TRMT13Q9NUP7 481 aaKnown RBP16.08■□□□□ 0.16
PSMB6-202ENST00000571309 MRPL11Q9Y3B7 192 aaKnown RBP16.08■□□□□ 0.16
PSMB6-202ENST00000571309 PRUNE2Q8WUY3 3088 aa16.08■□□□□ 0.16
PSMB6-202ENST00000571309 PBX2P40425 430 aa16.07■□□□□ 0.16
PSMB6-202ENST00000571309 NBPF20Q3BBV1 942 aa16.07■□□□□ 0.16
PSMB6-202ENST00000571309 NFRKBQ6P4R8 1299 aa16.07■□□□□ 0.16
PSMB6-202ENST00000571309 CYB5R4Q7L1T6 521 aa16.07■□□□□ 0.16
PSMB6-202ENST00000571309 STAG2Q8N3U4 1231 aa16.07■□□□□ 0.16
PSMB6-202ENST00000571309 VWCEQ96DN2 955 aa16.07■□□□□ 0.16
PSMB6-202ENST00000571309 IWS1Q96ST2 819 aa16.07■□□□□ 0.16
PSMB6-202ENST00000571309 MTIF3Q9H2K0 278 aaKnown RBP16.07■□□□□ 0.16
PSMB6-202ENST00000571309 VAT1LQ9HCJ6 419 aa16.07■□□□□ 0.16
PSMB6-202ENST00000571309 CXXC1Q9P0U4 656 aaPredicted RBP16.07■□□□□ 0.16
PSMB6-202ENST00000571309 CHD9Q3L8U1 2897 aa16.06■□□□□ 0.16
PSMB6-202ENST00000571309 KIAA1217Q5T5P2 1943 aa16.06■□□□□ 0.16
PSMB6-202ENST00000571309 DHX16O60231 1041 aaKnown RBP16.06■□□□□ 0.16
PSMB6-202ENST00000571309 CYP2C9P11712 490 aa16.06■□□□□ 0.16
PSMB6-202ENST00000571309 GHRHRQ02643 423 aa16.06■□□□□ 0.16
PSMB6-202ENST00000571309 PTPN11Q06124 597 aaPredicted RBP16.06■□□□□ 0.16
PSMB6-202ENST00000571309 RPUSD2Q8IZ73 545 aaKnown RBP16.06■□□□□ 0.16
PSMB6-202ENST00000571309 RUFY2Q8WXA3 655 aa16.06■□□□□ 0.16
PSMB6-202ENST00000571309 MTMR8Q96EF0 704 aa16.06■□□□□ 0.16
PSMB6-202ENST00000571309 RMDN3Q96TC7 470 aa16.06■□□□□ 0.16
PSMB6-202ENST00000571309 AMNQ9BXJ7 453 aa16.06■□□□□ 0.16
PSMB6-202ENST00000571309 PALM3A6NDB9 673 aaPredicted RBP16.05■□□□□ 0.16
PSMB6-202ENST00000571309 KLRF2D3W0D1 207 aa16.05■□□□□ 0.16
PSMB6-202ENST00000571309 OPLAHO14841 1288 aa16.05■□□□□ 0.16
PSMB6-202ENST00000571309 CHMLP26374 656 aa16.05■□□□□ 0.16
PSMB6-202ENST00000571309 RAB30Q15771 203 aa16.05■□□□□ 0.16
PSMB6-202ENST00000571309 STXBP2Q15833 593 aa16.05■□□□□ 0.16
PSMB6-202ENST00000571309 SEPT14Q6ZU15 432 aa16.05■□□□□ 0.16
PSMB6-202ENST00000571309 OTOP2Q7RTS6 562 aa16.05■□□□□ 0.16
PSMB6-202ENST00000571309 SCLYQ96I15 445 aa16.05■□□□□ 0.16
PSMB6-202ENST00000571309 COL25A1Q9BXS0 654 aaPredicted RBP16.05■□□□□ 0.16
PSMB6-202ENST00000571309 MAD2L2Q9UI95 211 aa16.05■□□□□ 0.16
PSMB6-202ENST00000571309 U3KPZ7 1027 aaPredicted RBP16.05■□□□□ 0.16
PSMB6-202ENST00000571309 GBF1Q92538 1859 aa16.04■□□□□ 0.16
PSMB6-202ENST00000571309 PPP1R11O60927 126 aaPredicted RBP16.04■□□□□ 0.16
PSMB6-202ENST00000571309 GH1P01241 217 aa16.04■□□□□ 0.16
PSMB6-202ENST00000571309 PFKMP08237 780 aa16.04■□□□□ 0.16
PSMB6-202ENST00000571309 CYP21A2P08686 494 aa16.04■□□□□ 0.16
PSMB6-202ENST00000571309 HSD17B4P51659 736 aa16.04■□□□□ 0.16
PSMB6-202ENST00000571309 PTH1RQ03431 593 aa16.04■□□□□ 0.16
PSMB6-202ENST00000571309 ARHGAP1Q07960 439 aa16.04■□□□□ 0.16
PSMB6-202ENST00000571309 TRDNQ13061 729 aa16.04■□□□□ 0.16
PSMB6-202ENST00000571309 LY6KQ17RY6 165 aa16.04■□□□□ 0.16
PSMB6-202ENST00000571309 FAM47CQ5HY64 1035 aa16.04■□□□□ 0.16
PSMB6-202ENST00000571309 ARHGEF16Q5VV41 709 aa16.04■□□□□ 0.16
PSMB6-202ENST00000571309 AFG1LQ8WV93 481 aa16.04■□□□□ 0.16
PSMB6-202ENST00000571309 PXMP2Q9NR77 195 aa16.04■□□□□ 0.16
PSMB6-202ENST00000571309 MSRAQ9UJ68 235 aa16.04■□□□□ 0.16
PSMB6-202ENST00000571309 PITPNM1O00562 1244 aa16.03■□□□□ 0.16
PSMB6-202ENST00000571309 ZBTB5O15062 677 aa16.03■□□□□ 0.16
PSMB6-202ENST00000571309 EIF3JO75822 258 aaKnown RBP16.03■□□□□ 0.16
PSMB6-202ENST00000571309 CFBP00751 764 aa16.03■□□□□ 0.16
PSMB6-202ENST00000571309 MMP3P08254 477 aa16.03■□□□□ 0.16
PSMB6-202ENST00000571309 EIF2AK2P19525 551 aaKnown RBP16.03■□□□□ 0.16
PSMB6-202ENST00000571309 GRM4Q14833 912 aa16.03■□□□□ 0.16
PSMB6-202ENST00000571309 PPP1R13LQ8WUF5 828 aa16.03■□□□□ 0.16
PSMB6-202ENST00000571309 MAP3K20Q9NYL2 800 aaKnown RBP16.03■□□□□ 0.16
PSMB6-202ENST00000571309 DDX41Q9UJV9 622 aaKnown RBP16.03■□□□□ 0.16
PSMB6-202ENST00000571309 SLC4A7Q9Y6M7 1214 aa16.03■□□□□ 0.16
PSMB6-202ENST00000571309 SCN5AQ14524 2016 aa16.02■□□□□ 0.16
PSMB6-202ENST00000571309 TANC1Q9C0D5 1861 aa16.02■□□□□ 0.16
PSMB6-202ENST00000571309 NR3C2P08235 984 aa16.02■□□□□ 0.16
PSMB6-202ENST00000571309 RFC2P35250 354 aa16.02■□□□□ 0.16
PSMB6-202ENST00000571309 SLC35G1Q2M3R5 365 aa16.02■□□□□ 0.16
PSMB6-202ENST00000571309 SESTD1Q86VW0 696 aa16.02■□□□□ 0.16
PSMB6-202ENST00000571309 SAMD3Q8N6K7 520 aa16.02■□□□□ 0.16
PSMB6-202ENST00000571309 EMID1Q96A84 441 aaPredicted RBP16.02■□□□□ 0.16
PSMB6-202ENST00000571309 RIOX1Q9H6W3 641 aa16.02■□□□□ 0.16
PSMB6-202ENST00000571309 YBX2Q9Y2T7 364 aaKnown RBP16.02■□□□□ 0.16
PSMB6-202ENST00000571309 PCDHA1Q9Y5I3 950 aa16.02■□□□□ 0.16
PSMB6-202ENST00000571309 TAF6LQ9Y6J9 622 aa16.02■□□□□ 0.16
PSMB6-202ENST00000571309 E7EWF7 191 aa16.01■□□□□ 0.15
PSMB6-202ENST00000571309 IFIT3O14879 490 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms