RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 HOXA13P31271 388 aaPredicted RBP13.55□□□□□ -0.24
CDRT1-206ENST00000571263 CIITAP33076 1130 aa13.55□□□□□ -0.24
CDRT1-206ENST00000571263 ME1P48163 572 aa13.55□□□□□ -0.24
CDRT1-206ENST00000571263 ARHGAP4P98171 946 aa13.55□□□□□ -0.24
CDRT1-206ENST00000571263 ATP2C1P98194 919 aaPredicted RBP13.55□□□□□ -0.24
CDRT1-206ENST00000571263 CEBPZQ03701 1054 aaKnown RBP13.55□□□□□ -0.24
CDRT1-206ENST00000571263 BAATQ14032 418 aaPredicted RBP13.55□□□□□ -0.24
CDRT1-206ENST00000571263 KCTD2Q14681 263 aa13.55□□□□□ -0.24
CDRT1-206ENST00000571263 PTPAQ15257 358 aa13.55□□□□□ -0.24
CDRT1-206ENST00000571263 ZNF174Q15697 407 aa13.55□□□□□ -0.24
CDRT1-206ENST00000571263 ZNF579Q8NAF0 562 aaKnown RBP13.55□□□□□ -0.24
CDRT1-206ENST00000571263 SYTL5Q8TDW5 730 aaPredicted RBP13.55□□□□□ -0.24
CDRT1-206ENST00000571263 NSUN6Q8TEA1 469 aaKnown RBP13.55□□□□□ -0.24
CDRT1-206ENST00000571263 CRYGNQ8WXF5 182 aa13.55□□□□□ -0.24
CDRT1-206ENST00000571263 CAPNS2Q96L46 248 aa13.55□□□□□ -0.24
CDRT1-206ENST00000571263 IWS1Q96ST2 819 aa13.55□□□□□ -0.24
CDRT1-206ENST00000571263 LMBRD1Q9NUN5 540 aa13.55□□□□□ -0.24
CDRT1-206ENST00000571263 CYP39A1Q9NYL5 469 aa13.55□□□□□ -0.24
CDRT1-206ENST00000571263 PCDHB6Q9Y5E3 794 aa13.55□□□□□ -0.24
CDRT1-206ENST00000571263 MYH15Q9Y2K3 1946 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 A0A1W2PQ27 194 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 A0A1W2PQ64 194 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 A0A1W2PQD8 194 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 IGF2BP3O00425 579 aaKnown RBP eCLIP13.54□□□□□ -0.24
CDRT1-206ENST00000571263 ADAMTS3O15072 1205 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 TBX3O15119 743 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 MAFGO15525 162 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 CA12O43570 354 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 TLR2O60603 784 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 CUTAO60888 179 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 MCM7P33993 719 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 ZNF76P36508 570 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 Q3C1V9 767 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 Q4G0T1 1027 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 PCNX4Q63HM2 1172 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 CYP4F22Q6NT55 531 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 NIPA1Q7RTP0 329 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 ANKRD13CQ8N6S4 541 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 KRI1Q8N9T8 703 aaKnown RBP13.54□□□□□ -0.24
CDRT1-206ENST00000571263 TBC1D5Q92609 795 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 MBOAT7Q96N66 472 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 RMDN3Q96TC7 470 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 TXNRD2Q9NNW7 524 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 SLC5A4Q9NY91 659 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 SRPRBQ9Y5M8 271 aaKnown RBP13.54□□□□□ -0.24
CDRT1-206ENST00000571263 IVNS1ABPQ9Y6Y0 642 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 COL11A1P12107 1806 aaPredicted RBP13.54□□□□□ -0.24
CDRT1-206ENST00000571263 FRMPD4Q14CM0 1322 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 RPTORQ8N122 1335 aa13.54□□□□□ -0.24
CDRT1-206ENST00000571263 FAM205CA6NFA0 338 aa13.53□□□□□ -0.24
CDRT1-206ENST00000571263 POTEB2H3BUK9 544 aa13.53□□□□□ -0.24
CDRT1-206ENST00000571263 MARCH6O60337 910 aa13.53□□□□□ -0.24
CDRT1-206ENST00000571263 NEMFO60524 1076 aa13.53□□□□□ -0.24
CDRT1-206ENST00000571263 PTPREP23469 700 aa13.53□□□□□ -0.24
CDRT1-206ENST00000571263 PTGDRQ13258 359 aa13.53□□□□□ -0.24
CDRT1-206ENST00000571263 ARHGEF16Q5VV41 709 aa13.53□□□□□ -0.24
CDRT1-206ENST00000571263 POTEEQ6S8J3 1075 aa13.53□□□□□ -0.24
CDRT1-206ENST00000571263 DTHD1Q6ZMT9 781 aa13.53□□□□□ -0.24
CDRT1-206ENST00000571263 SLFN12Q8IYM2 578 aa13.53□□□□□ -0.24
CDRT1-206ENST00000571263 FAM20AQ96MK3 541 aa13.53□□□□□ -0.24
CDRT1-206ENST00000571263 MMP19Q99542 508 aa13.53□□□□□ -0.24
CDRT1-206ENST00000571263 ANP32EQ9BTT0 268 aa13.53□□□□□ -0.24
CDRT1-206ENST00000571263 RAB34Q9BZG1 259 aa13.53□□□□□ -0.24
CDRT1-206ENST00000571263 A1CFQ9NQ94 594 aaKnown RBP13.53□□□□□ -0.24
CDRT1-206ENST00000571263 DDX25Q9UHL0 483 aaKnown RBP13.53□□□□□ -0.24
CDRT1-206ENST00000571263 STK24Q9Y6E0 443 aa13.53□□□□□ -0.24
CDRT1-206ENST00000571263 OR52Z1P0C646 297 aa13.52□□□□□ -0.25
CDRT1-206ENST00000571263 BCRP11274 1271 aa13.52□□□□□ -0.25
CDRT1-206ENST00000571263 CCND2P30279 289 aa13.52□□□□□ -0.25
CDRT1-206ENST00000571263 LONP1P36776 959 aaKnown RBP13.52□□□□□ -0.25
CDRT1-206ENST00000571263 SETQ01105 290 aaPredicted RBP13.52□□□□□ -0.25
CDRT1-206ENST00000571263 CALCRLQ16602 461 aa13.52□□□□□ -0.25
CDRT1-206ENST00000571263 TMEM266Q2M3C6 531 aa13.52□□□□□ -0.25
CDRT1-206ENST00000571263 NOM1Q5C9Z4 860 aaKnown RBP13.52□□□□□ -0.25
CDRT1-206ENST00000571263 C17orf99Q6UX52 265 aa13.52□□□□□ -0.25
CDRT1-206ENST00000571263 CDHR1Q96JP9 859 aa13.52□□□□□ -0.25
CDRT1-206ENST00000571263 AK8Q96MA6 479 aa13.52□□□□□ -0.25
CDRT1-206ENST00000571263 TAAR1Q96RJ0 339 aa13.52□□□□□ -0.25
CDRT1-206ENST00000571263 PYM1Q9BRP8 204 aaKnown RBP13.52□□□□□ -0.25
CDRT1-206ENST00000571263 CFHR5Q9BXR6 569 aa13.52□□□□□ -0.25
CDRT1-206ENST00000571263 GDPD2Q9HCC8 539 aa13.52□□□□□ -0.25
CDRT1-206ENST00000571263 PXMP2Q9NR77 195 aa13.52□□□□□ -0.25
CDRT1-206ENST00000571263 PCDHA7Q9UN72 937 aa13.52□□□□□ -0.25
CDRT1-206ENST00000571263 ADGRA2Q96PE1 1338 aa13.52□□□□□ -0.25
CDRT1-206ENST00000571263 RBBP6Q7Z6E9 1792 aaKnown RBP13.52□□□□□ -0.25
CDRT1-206ENST00000571263 CMA1P23946 247 aa13.51□□□□□ -0.25
CDRT1-206ENST00000571263 PDIA5Q14554 519 aa13.51□□□□□ -0.25
CDRT1-206ENST00000571263 PGM5Q15124 567 aa13.51□□□□□ -0.25
CDRT1-206ENST00000571263 CEP55Q53EZ4 464 aa13.51□□□□□ -0.25
CDRT1-206ENST00000571263 SLC30A10Q6XR72 485 aa13.51□□□□□ -0.25
CDRT1-206ENST00000571263 NLRX1Q86UT6 975 aa13.51□□□□□ -0.25
CDRT1-206ENST00000571263 VSIG10LQ86VR7 867 aa13.51□□□□□ -0.25
CDRT1-206ENST00000571263 C4orf32Q8N8J7 132 aa13.51□□□□□ -0.25
CDRT1-206ENST00000571263 PGBD1Q96JS3 809 aa13.51□□□□□ -0.25
CDRT1-206ENST00000571263 MXRA8Q9BRK3 442 aa13.51□□□□□ -0.25
CDRT1-206ENST00000571263 PDCD2LQ9BRP1 358 aa13.51□□□□□ -0.25
CDRT1-206ENST00000571263 FAM13BQ9NYF5 915 aa13.51□□□□□ -0.25
CDRT1-206ENST00000571263 DIS3Q9Y2L1 958 aaKnown RBP13.51□□□□□ -0.25
CDRT1-206ENST00000571263 DDX49Q9Y6V7 483 aaKnown RBP13.51□□□□□ -0.25
CDRT1-206ENST00000571263 SLC15A5A6NIM6 579 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms