RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 EIF3HO15372 352 aaKnown RBP eCLIP10.99□□□□□ -0.65
USP43-203ENST00000570827 PRPF3O43395 683 aaKnown RBP10.99□□□□□ -0.65
USP43-203ENST00000570827 CCDC172P0C7W6 258 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 STK4Q13043 487 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 PPP1R7Q15435 360 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 MGARPQ8TDB4 240 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 CELF1Q92879 486 aaKnown RBP10.99□□□□□ -0.65
USP43-203ENST00000570827 ZIM3Q96PE6 472 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 CLTAP09496 248 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 USP17L8P0C7I0 530 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 DDX42Q86XP3 938 aaKnown RBP eCLIP10.99□□□□□ -0.65
USP43-203ENST00000570827 STAG1Q8WVM7 1258 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 PPP1R1BQ9UD71 204 aaPredicted RBP10.99□□□□□ -0.65
USP43-203ENST00000570827 SNX12Q9UMY4 172 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 REXO2Q9Y3B8 237 aaKnown RBP10.99□□□□□ -0.65
USP43-203ENST00000570827 JCADQ9P266 1359 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 SEMA3EO15041 775 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 SLC1A4P43007 532 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 RPS6KA1Q15418 735 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 SFMBT2Q5VUG0 894 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 WDR93Q6P2C0 686 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 CNNM4Q6P4Q7 775 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 DAAM2Q86T65 1068 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 ARFGAP2Q8N6H7 521 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 SNX29Q8TEQ0 813 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 SLC4A9Q96Q91 983 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 SETDB2Q96T68 719 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 ISCA1Q9BUE6 129 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 TMEM60Q9H2L4 133 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 CAPN11Q9UMQ6 739 aa10.99□□□□□ -0.65
USP43-203ENST00000570827 USP17L3A6NCW0 530 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 USP17L4A6NCW7 530 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 PSMD14O00487 310 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 PALMO75781 387 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 NEBLO76041 1014 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 LONP1P36776 959 aaKnown RBP10.98□□□□□ -0.65
USP43-203ENST00000570827 KRT79Q5XKE5 535 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 USP17L1Q7RTZ2 530 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 TGFBRAP1Q8WUH2 860 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 TCP11Q8WWU5 503 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 N4BP2L2Q92802 583 aaPredicted RBP10.98□□□□□ -0.65
USP43-203ENST00000570827 ZNF622Q969S3 477 aaKnown RBP eCLIP10.98□□□□□ -0.65
USP43-203ENST00000570827 RNPC3Q96LT9 517 aaKnown RBP10.98□□□□□ -0.65
USP43-203ENST00000570827 NDST4Q9H3R1 872 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 NOVA2Q9UNW9 492 aaKnown RBP10.98□□□□□ -0.65
USP43-203ENST00000570827 PLAAQ9Y263 795 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 CHD2O14647 1828 aaKnown RBP10.98□□□□□ -0.65
USP43-203ENST00000570827 WDR19Q8NEZ3 1342 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 ABCB4P21439 1286 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 TMOD1P28289 359 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 ATP2C1P98194 919 aaPredicted RBP10.98□□□□□ -0.65
USP43-203ENST00000570827 STAG2Q8N3U4 1231 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 FAM133AQ8N9E0 248 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 TSEN2Q8NCE0 465 aaKnown RBP10.98□□□□□ -0.65
USP43-203ENST00000570827 MROH5Q6ZUA9 1318 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 SMCO2A6NFE2 343 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 CCNE1P24864 410 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 TXNRD1Q16881 649 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 HERC4Q5GLZ8 1057 aaPredicted RBP10.98□□□□□ -0.65
USP43-203ENST00000570827 TMTC3Q6ZXV5 915 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 CLEC10AQ8IUN9 316 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 PAIP2Q9BPZ3 127 aaKnown RBP10.98□□□□□ -0.65
USP43-203ENST00000570827 PHF20Q9BVI0 1012 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 SLC24A3Q9HC58 644 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 CCDC87Q9NVE4 849 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 ODF2LQ9ULJ1 636 aa10.98□□□□□ -0.65
USP43-203ENST00000570827 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.98□□□□□ -0.65
USP43-203ENST00000570827 SLURP2P0DP57 97 aa10.97□□□□□ -0.65
USP43-203ENST00000570827 PEX19P40855 299 aa10.97□□□□□ -0.65
USP43-203ENST00000570827 ADSSL1Q8N142 457 aa10.97□□□□□ -0.65
USP43-203ENST00000570827 NLRP3Q96P20 1036 aa10.97□□□□□ -0.65
USP43-203ENST00000570827 CXorf56Q9H5V9 222 aa10.97□□□□□ -0.65
USP43-203ENST00000570827 GPCPD1Q9NPB8 672 aa10.97□□□□□ -0.65
USP43-203ENST00000570827 HDLBPQ00341 1268 aaKnown RBP10.97□□□□□ -0.65
USP43-203ENST00000570827 ADCY1Q08828 1119 aa10.97□□□□□ -0.65
USP43-203ENST00000570827 C3orf67Q6ZVT6 689 aa10.97□□□□□ -0.65
USP43-203ENST00000570827 CCDC84Q86UT8 332 aaPredicted RBP10.97□□□□□ -0.65
USP43-203ENST00000570827 CCDC170Q8IYT3 715 aa10.97□□□□□ -0.65
USP43-203ENST00000570827 FNBP4Q8N3X1 1017 aaPredicted RBP10.97□□□□□ -0.65
USP43-203ENST00000570827 ZNF526Q8TF50 670 aaPredicted RBP10.97□□□□□ -0.65
USP43-203ENST00000570827 CARD10Q9BWT7 1032 aa10.97□□□□□ -0.65
USP43-203ENST00000570827 VIPAS39Q9H9C1 493 aa10.97□□□□□ -0.65
USP43-203ENST00000570827 C6orf50Q9HD87 102 aa10.97□□□□□ -0.65
USP43-203ENST00000570827 GGT7Q9UJ14 662 aa10.97□□□□□ -0.65
USP43-203ENST00000570827 CRYBG1Q9Y4K1 1723 aa10.97□□□□□ -0.65
USP43-203ENST00000570827 KRIT1O00522 736 aa10.97□□□□□ -0.65
USP43-203ENST00000570827 PPP1R12BO60237 982 aaPredicted RBP10.97□□□□□ -0.65
USP43-203ENST00000570827 SLCO1A2P46721 670 aa10.97□□□□□ -0.65
USP43-203ENST00000570827 NT5DC1Q5TFE4 455 aa10.97□□□□□ -0.65
USP43-203ENST00000570827 EP400NLQ6ZTU2 488 aa10.97□□□□□ -0.65
USP43-203ENST00000570827 ADGRA1Q86SQ6 560 aa10.97□□□□□ -0.65
USP43-203ENST00000570827 RAB34Q9BZG1 259 aa10.97□□□□□ -0.65
USP43-203ENST00000570827 STK38LQ9Y2H1 464 aa10.97□□□□□ -0.65
USP43-203ENST00000570827 ATP8A1Q9Y2Q0 1164 aa10.97□□□□□ -0.65
USP43-203ENST00000570827 OR52Z1P0C646 297 aa10.96□□□□□ -0.65
USP43-203ENST00000570827 FAM153BP0C7A2 387 aa10.96□□□□□ -0.65
USP43-203ENST00000570827 NONOQ15233 471 aaKnown RBP eCLIP10.96□□□□□ -0.65
USP43-203ENST00000570827 FAM153CQ494X1 144 aa10.96□□□□□ -0.65
USP43-203ENST00000570827 CACNA2D3Q8IZS8 1091 aa10.96□□□□□ -0.65
USP43-203ENST00000570827 UBXN6Q9BZV1 441 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms