RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 Q9Y3F1 56 aa8.64□□□□□ -1.03
SMG6-205ENST00000570659 PCDHGC5Q9Y5F6 944 aa8.64□□□□□ -1.03
SMG6-205ENST00000570659 KIAA1671Q9BY89 1806 aa8.64□□□□□ -1.03
SMG6-205ENST00000570659 WDR87Q6ZQQ6 2873 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 PTPRZ1P23471 2315 aaPredicted RBP8.63□□□□□ -1.03
SMG6-205ENST00000570659 TMEM221A6NGB7 291 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 A6NJR5 290 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 ASB14A6NK59 587 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 M0R296 226 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 FOXP2O15409 715 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 MBTPS2O43462 519 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 IGSF3O75054 1194 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 KRT37O76014 449 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 BAIAP3O94812 1187 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 CKBP12277 381 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 MCCP23508 829 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 RFC2P35250 354 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 ALDH5A1P51649 535 aaPredicted RBP8.63□□□□□ -1.03
SMG6-205ENST00000570659 HTRA4P83105 476 aaPredicted RBP8.63□□□□□ -1.03
SMG6-205ENST00000570659 PTGISQ16647 500 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 CTC1Q2NKJ3 1217 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 ZNF618Q5T7W0 954 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 LRRC8DQ7L1W4 858 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 BANK1Q8NDB2 785 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 RHPN1Q8TCX5 695 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 CLEC4DQ8WXI8 215 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 MKL1Q969V6 931 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 PABPC5Q96DU9 382 aaKnown RBP8.63□□□□□ -1.03
SMG6-205ENST00000570659 STRBPQ96SI9 672 aaKnown RBP8.63□□□□□ -1.03
SMG6-205ENST00000570659 ZBED2Q9BTP6 218 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 VTA1Q9NP79 307 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 CLDND1Q9NY35 253 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 FEM1BQ9UK73 627 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 PRR12Q9ULL5 1215 aa8.63□□□□□ -1.03
SMG6-205ENST00000570659 RIF1Q5UIP0 2472 aaKnown RBP8.63□□□□□ -1.03
SMG6-205ENST00000570659 ZFHX4Q86UP3 3567 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 DNAH14Q0VDD8 3507 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 GVINP1Q7Z2Y8 2422 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.62□□□□□ -1.03
SMG6-205ENST00000570659 MINDY4BA8MYZ0 360 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 KIF28PB7ZC32 967 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 H0Y858 1186 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 M0R2C6 588 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 GRM6O15303 877 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 ANP32CO43423 234 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 SUPT20HL2P0C7V6 817 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 BMP3P12645 472 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 SELPP16109 830 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 SLC16A2P36021 539 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 KCNJ6P48051 423 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 OAZ1P54368 228 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 SMAD2Q15796 467 aaKnown RBP8.62□□□□□ -1.03
SMG6-205ENST00000570659 NFRKBQ6P4R8 1299 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 CNKSR3Q6P9H4 555 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 TRIM67Q6ZTA4 783 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 ADGRD2Q7Z7M1 963 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 GMCL1P1Q8NEA9 526 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 AFG1LQ8WV93 481 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 TBC1D5Q92609 795 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 EDAQ92838 391 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 OSBP2Q969R2 916 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 ASIC4Q96FT7 647 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 KCNH6Q9H252 994 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 SMOC2Q9H3U7 446 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 TLR9Q9NR96 1032 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 IL17RBQ9NRM6 502 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 PAG1Q9NWQ8 432 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 HDAC6Q9UBN7 1215 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 FBXO40Q9UH90 709 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 TELO2Q9Y4R8 837 aa8.62□□□□□ -1.03
SMG6-205ENST00000570659 KMT2BQ9UMN6 2715 aaPredicted RBP8.62□□□□□ -1.03
SMG6-205ENST00000570659 MED19A0JLT2 244 aaPredicted RBP8.61□□□□□ -1.03
SMG6-205ENST00000570659 H3BNC9 293 aa8.61□□□□□ -1.03
SMG6-205ENST00000570659 ZEB2O60315 1214 aa8.61□□□□□ -1.03
SMG6-205ENST00000570659 SORBS3O60504 671 aa8.61□□□□□ -1.03
SMG6-205ENST00000570659 EDNRBP24530 442 aa8.61□□□□□ -1.03
SMG6-205ENST00000570659 DNAJB1P25685 340 aa8.61□□□□□ -1.03
SMG6-205ENST00000570659 ARHGAP1Q07960 439 aa8.61□□□□□ -1.03
SMG6-205ENST00000570659 RBL2Q08999 1139 aa8.61□□□□□ -1.03
SMG6-205ENST00000570659 GPM6BQ13491 265 aa8.61□□□□□ -1.03
SMG6-205ENST00000570659 TSHZ3Q63HK5 1081 aa8.61□□□□□ -1.03
SMG6-205ENST00000570659 CCDC62Q6P9F0 684 aa8.61□□□□□ -1.03
SMG6-205ENST00000570659 RETREG2Q8NC44 543 aa8.61□□□□□ -1.03
SMG6-205ENST00000570659 DBF4BQ8NFT6 615 aa8.61□□□□□ -1.03
SMG6-205ENST00000570659 PBXIP1Q96AQ6 731 aa8.61□□□□□ -1.03
SMG6-205ENST00000570659 SEC62Q99442 399 aaKnown RBP8.61□□□□□ -1.03
SMG6-205ENST00000570659 BCAS3Q9H6U6 928 aa8.61□□□□□ -1.03
SMG6-205ENST00000570659 POLR3EQ9NVU0 708 aa8.61□□□□□ -1.03
SMG6-205ENST00000570659 CLEC1BQ9P126 229 aa8.61□□□□□ -1.03
SMG6-205ENST00000570659 COL20A1Q9P218 1284 aa8.61□□□□□ -1.03
SMG6-205ENST00000570659 CDH22Q9UJ99 828 aa8.61□□□□□ -1.03
SMG6-205ENST00000570659 MTMR7Q9Y216 660 aa8.61□□□□□ -1.03
SMG6-205ENST00000570659 SUPT16HQ9Y5B9 1047 aaKnown RBP8.61□□□□□ -1.03
SMG6-205ENST00000570659 RALGAPA2Q2PPJ7 1873 aa8.61□□□□□ -1.03
SMG6-205ENST00000570659 FAM186AA6NE01 2351 aa8.61□□□□□ -1.03
SMG6-205ENST00000570659 PLIN4Q96Q06 1357 aa8.61□□□□□ -1.03
SMG6-205ENST00000570659 NCOR2Q9Y618 2525 aa8.6□□□□□ -1.03
SMG6-205ENST00000570659 GLP2RO95838 553 aa8.6□□□□□ -1.03
SMG6-205ENST00000570659 MMP3P08254 477 aa8.6□□□□□ -1.03
SMG6-205ENST00000570659 CT47B1P0C2W7 299 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms