RNA–Protein interactions for RNA: ENST00000570231.1

THUMPD1-205, Transcript of THUMP domain containing 1, humanhuman

TSL 2

Gene THUMPD1, Length 1,040 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-205ENST00000570231 PSME4Q14997 1843 aa8.14□□□□□ -1.11
THUMPD1-205ENST00000570231 MYH2Q9UKX2 1941 aa8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 NAV1Q8NEY1 1877 aa8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 ATRNL1Q5VV63 1379 aa8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 TNKSO95271 1327 aa8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 ERICH2A1L162 156 aa8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 SH2B2O14492 632 aaPredicted RBP8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 ORC4O43929 436 aa8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 DTNBO60941 627 aa8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 AKR1B1P15121 316 aa8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 SHMT1P34896 483 aa8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 EXOSC10Q01780 885 aaKnown RBP8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 GABPAQ06546 454 aa8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 APOBRQ0VD83 1088 aa8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 TOB2Q14106 344 aaPredicted RBP8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 BECN1Q14457 450 aa8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 HIF1AQ16665 826 aa8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 NBPF12Q5TAG4 269 aaPredicted RBP8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 FKBP1CQ5VVH2 108 aa8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 KRT26Q7Z3Y9 468 aa8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 CLEC10AQ8IUN9 316 aa8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 CHMP4CQ96CF2 233 aa8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 GLIS2Q9BZE0 524 aaPredicted RBP8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 EHD4Q9H223 541 aa8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 ZNF287Q9HBT7 754 aa8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 SWAP70Q9UH65 585 aa8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 FZD1Q9UP38 647 aa8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 MTMR7Q9Y216 660 aa8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 CCDC88AQ3V6T2 1871 aa8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 COL2A1P02458 1487 aaPredicted RBP8.13□□□□□ -1.11
THUMPD1-205ENST00000570231 DDX60LQ5H9U9 1706 aaKnown RBP8.12□□□□□ -1.11
THUMPD1-205ENST00000570231 KLF18A0A0U1RQI7 1052 aa8.12□□□□□ -1.11
THUMPD1-205ENST00000570231 GOLGA8BA8MQT2 603 aa8.12□□□□□ -1.11
THUMPD1-205ENST00000570231 SIN3BO75182 1162 aa8.12□□□□□ -1.11
THUMPD1-205ENST00000570231 LARGE1O95461 756 aa8.12□□□□□ -1.11
THUMPD1-205ENST00000570231 PCP11498 1178 aaKnown RBP8.12□□□□□ -1.11
THUMPD1-205ENST00000570231 VEGFAP15692 232 aaPredicted RBP8.12□□□□□ -1.11
THUMPD1-205ENST00000570231 RXRAP19793 462 aa8.12□□□□□ -1.11
THUMPD1-205ENST00000570231 ATP2B2Q01814 1243 aa8.12□□□□□ -1.11
THUMPD1-205ENST00000570231 RRP1BQ14684 758 aaKnown RBP8.12□□□□□ -1.11
THUMPD1-205ENST00000570231 SART3Q15020 963 aaKnown RBP8.12□□□□□ -1.11
THUMPD1-205ENST00000570231 CERKLQ49MI3 558 aaPredicted RBP8.12□□□□□ -1.11
THUMPD1-205ENST00000570231 MAP1SQ66K74 1059 aaPredicted RBP8.12□□□□□ -1.11
THUMPD1-205ENST00000570231 USP48Q86UV5 1035 aa8.12□□□□□ -1.11
THUMPD1-205ENST00000570231 IQCA1Q86XH1 822 aa8.12□□□□□ -1.11
THUMPD1-205ENST00000570231 FOXP4Q8IVH2 680 aaPredicted RBP8.12□□□□□ -1.11
THUMPD1-205ENST00000570231 ADAMTS19Q8TE59 1207 aa8.12□□□□□ -1.11
THUMPD1-205ENST00000570231 TEPSINQ96N21 525 aa8.12□□□□□ -1.11
THUMPD1-205ENST00000570231 MYL10Q9BUA6 226 aa8.12□□□□□ -1.11
THUMPD1-205ENST00000570231 ZNF408Q9H9D4 720 aa8.12□□□□□ -1.11
THUMPD1-205ENST00000570231 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.12□□□□□ -1.11
THUMPD1-205ENST00000570231 STX8Q9UNK0 236 aa8.12□□□□□ -1.11
THUMPD1-205ENST00000570231 SBF1O95248 1867 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 PITPNM2Q9BZ72 1349 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 CCDC69A6NI79 296 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 TRAF5O00463 557 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 GH2P01242 217 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 HSP90AA1P07900 732 aaKnown RBP8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 FGRP09769 529 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 CLDN10P78369 228 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 JAG1P78504 1218 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 WTAPQ15007 396 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 ANKRD1Q15327 319 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 ABCB5Q2M3G0 1257 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 IFIT1BQ5T764 474 aaKnown RBP8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 CCDC84Q86UT8 332 aaPredicted RBP8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 PNMA8AQ86V59 439 aaPredicted RBP8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 CCDC144CPQ8IYA2 1237 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 SIX5Q8N196 739 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 LRRC47Q8N1G4 583 aaKnown RBP8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 ENAHQ8N8S7 591 aaPredicted RBP8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 NECAB1Q8N987 351 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 SNX21Q969T3 373 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 TMX3Q96JJ7 454 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 TMEM87BQ96K49 555 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 CEP63Q96MT8 703 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 TSPAN10Q9H1Z9 355 aaPredicted RBP8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 LY9Q9HBG7 655 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 PGAP2Q9UHJ9 254 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 HERC5Q9UII4 1024 aaKnown RBP8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 BRPF3Q9ULD4 1205 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 TPCN1Q9ULQ1 816 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 ANGEL1Q9UNK9 670 aaKnown RBP8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 LIMCH1Q9UPQ0 1083 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 KIAA1024Q9UPX6 916 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 PPP2R3BQ9Y5P8 575 aa8.11□□□□□ -1.11
THUMPD1-205ENST00000570231 SSC5DA1L4H1 1573 aa8.1□□□□□ -1.11
THUMPD1-205ENST00000570231 LAMB1P07942 1786 aa8.1□□□□□ -1.11
THUMPD1-205ENST00000570231 WDR19Q8NEZ3 1342 aa8.1□□□□□ -1.11
THUMPD1-205ENST00000570231 DICER1Q9UPY3 1922 aaKnown RBP8.1□□□□□ -1.11
THUMPD1-205ENST00000570231 GOLGA8AA7E2F4 631 aa8.1□□□□□ -1.11
THUMPD1-205ENST00000570231 C1QTNF9BB2RNN3 333 aa8.1□□□□□ -1.11
THUMPD1-205ENST00000570231 PPP1R12BO60237 982 aaPredicted RBP8.1□□□□□ -1.11
THUMPD1-205ENST00000570231 SPATA31C1P0DKV0 1188 aa8.1□□□□□ -1.11
THUMPD1-205ENST00000570231 MCM2P49736 904 aa8.1□□□□□ -1.11
THUMPD1-205ENST00000570231 FMR1Q06787 632 aaKnown RBP eCLIP8.1□□□□□ -1.11
THUMPD1-205ENST00000570231 SEPT2Q15019 361 aa8.1□□□□□ -1.11
THUMPD1-205ENST00000570231 RAB3GAP1Q15042 981 aa8.1□□□□□ -1.11
THUMPD1-205ENST00000570231 PRRT3Q5FWE3 981 aa8.1□□□□□ -1.11
THUMPD1-205ENST00000570231 DCAF15Q66K64 600 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms