RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 POLR3EQ9NVU0 708 aa14.22□□□□□ -0.13
CAPN3-220ENST00000569827 PCDHA11Q9Y5I1 949 aa14.22□□□□□ -0.13
CAPN3-220ENST00000569827 NLRC5Q86WI3 1866 aa14.22□□□□□ -0.13
CAPN3-220ENST00000569827 CPT1AP50416 773 aa14.21□□□□□ -0.13
CAPN3-220ENST00000569827 NMIQ13287 307 aaPredicted RBP14.21□□□□□ -0.13
CAPN3-220ENST00000569827 PPP2R5BQ15173 497 aa14.21□□□□□ -0.13
CAPN3-220ENST00000569827 PPP4R3BQ5MIZ7 849 aa14.21□□□□□ -0.13
CAPN3-220ENST00000569827 IL27Q8NEV9 243 aa14.21□□□□□ -0.13
CAPN3-220ENST00000569827 TBC1D5Q92609 795 aa14.21□□□□□ -0.13
CAPN3-220ENST00000569827 GPHNQ9NQX3 736 aaPredicted RBP14.21□□□□□ -0.13
CAPN3-220ENST00000569827 ATG2AQ2TAZ0 1938 aa14.21□□□□□ -0.14
CAPN3-220ENST00000569827 MYO7AQ13402 2215 aa14.21□□□□□ -0.14
CAPN3-220ENST00000569827 NEDD4P46934 1319 aa14.2□□□□□ -0.14
CAPN3-220ENST00000569827 RBM47A0AV96 593 aaKnown RBP14.2□□□□□ -0.14
CAPN3-220ENST00000569827 FGRP09769 529 aa14.2□□□□□ -0.14
CAPN3-220ENST00000569827 ZNF543Q08ER8 600 aa14.2□□□□□ -0.14
CAPN3-220ENST00000569827 TMEM67Q5HYA8 995 aa14.2□□□□□ -0.14
CAPN3-220ENST00000569827 ARNTL2Q8WYA1 636 aa14.2□□□□□ -0.14
CAPN3-220ENST00000569827 EVI5LQ96CN4 794 aa14.2□□□□□ -0.14
CAPN3-220ENST00000569827 FTOQ9C0B1 505 aaKnown RBP eCLIP14.2□□□□□ -0.14
CAPN3-220ENST00000569827 UBA5Q9GZZ9 404 aa14.2□□□□□ -0.14
CAPN3-220ENST00000569827 KAT6AQ92794 2004 aa14.19□□□□□ -0.14
CAPN3-220ENST00000569827 LCHNA4D1U4 455 aa14.19□□□□□ -0.14
CAPN3-220ENST00000569827 IQCF3P0C7M6 154 aa14.19□□□□□ -0.14
CAPN3-220ENST00000569827 TXNP10599 105 aaKnown RBP14.19□□□□□ -0.14
CAPN3-220ENST00000569827 HSPD1P10809 573 aaKnown RBP14.19□□□□□ -0.14
CAPN3-220ENST00000569827 PDE1AP54750 535 aa14.19□□□□□ -0.14
CAPN3-220ENST00000569827 SEPT14Q6ZU15 432 aa14.19□□□□□ -0.14
CAPN3-220ENST00000569827 CHST3Q7LGC8 479 aa14.19□□□□□ -0.14
CAPN3-220ENST00000569827 CRBNQ96SW2 442 aa14.19□□□□□ -0.14
CAPN3-220ENST00000569827 HELLSQ9NRZ9 838 aa14.19□□□□□ -0.14
CAPN3-220ENST00000569827 COL20A1Q9P218 1284 aa14.19□□□□□ -0.14
CAPN3-220ENST00000569827 MTCH2Q9Y6C9 303 aa14.19□□□□□ -0.14
CAPN3-220ENST00000569827 SORBS3O60504 671 aa14.18□□□□□ -0.14
CAPN3-220ENST00000569827 SUPT20HL2P0C7V6 817 aa14.18□□□□□ -0.14
CAPN3-220ENST00000569827 BMP1P13497 986 aa14.18□□□□□ -0.14
CAPN3-220ENST00000569827 EDNRBP24530 442 aa14.18□□□□□ -0.14
CAPN3-220ENST00000569827 TAP1Q03518 808 aa14.18□□□□□ -0.14
CAPN3-220ENST00000569827 ALX1Q15699 326 aa14.18□□□□□ -0.14
CAPN3-220ENST00000569827 TCTN1Q2MV58 587 aa14.18□□□□□ -0.14
CAPN3-220ENST00000569827 SCFD2Q8WU76 684 aa14.18□□□□□ -0.14
CAPN3-220ENST00000569827 AFG1LQ8WV93 481 aa14.18□□□□□ -0.14
CAPN3-220ENST00000569827 NOD1Q9Y239 953 aa14.18□□□□□ -0.14
CAPN3-220ENST00000569827 TRIM6-TRIM34B2RNG4 842 aa14.17□□□□□ -0.14
CAPN3-220ENST00000569827 PFKMP08237 780 aa14.17□□□□□ -0.14
CAPN3-220ENST00000569827 LY6KQ17RY6 165 aa14.17□□□□□ -0.14
CAPN3-220ENST00000569827 MCMDC2Q4G0Z9 681 aa14.17□□□□□ -0.14
CAPN3-220ENST00000569827 GDF6Q6KF10 455 aaPredicted RBP14.17□□□□□ -0.14
CAPN3-220ENST00000569827 HERC6Q8IVU3 1022 aa14.17□□□□□ -0.14
CAPN3-220ENST00000569827 RETREG2Q8NC44 543 aa14.17□□□□□ -0.14
CAPN3-220ENST00000569827 TAAR1Q96RJ0 339 aa14.17□□□□□ -0.14
CAPN3-220ENST00000569827 CTAGE1Q96RT6 745 aa14.17□□□□□ -0.14
CAPN3-220ENST00000569827 SEZ6LQ9BYH1 1024 aa14.17□□□□□ -0.14
CAPN3-220ENST00000569827 TCP11L1Q9NUJ3 509 aa14.17□□□□□ -0.14
CAPN3-220ENST00000569827 ZBTB47Q9UFB7 747 aaPredicted RBP14.17□□□□□ -0.14
CAPN3-220ENST00000569827 MTUS1Q9ULD2 1270 aa14.17□□□□□ -0.14
CAPN3-220ENST00000569827 CCDC171Q6TFL3 1326 aa14.16□□□□□ -0.14
CAPN3-220ENST00000569827 RAD50Q92878 1312 aa14.16□□□□□ -0.14
CAPN3-220ENST00000569827 LOXHD1Q8IVV2 1947 aa14.16□□□□□ -0.14
CAPN3-220ENST00000569827 A6NJR5 290 aa14.16□□□□□ -0.14
CAPN3-220ENST00000569827 MMP3P08254 477 aa14.16□□□□□ -0.14
CAPN3-220ENST00000569827 SNHG28P0DPA3 235 aa14.16□□□□□ -0.14
CAPN3-220ENST00000569827 ACTN1P12814 892 aa14.16□□□□□ -0.14
CAPN3-220ENST00000569827 DEFB103AP81534 67 aa14.16□□□□□ -0.14
CAPN3-220ENST00000569827 CDC37Q16543 378 aaPredicted RBP14.16□□□□□ -0.14
CAPN3-220ENST00000569827 PTGISQ16647 500 aa14.16□□□□□ -0.14
CAPN3-220ENST00000569827 NFRKBQ6P4R8 1299 aa14.16□□□□□ -0.14
CAPN3-220ENST00000569827 MFSD6Q6ZSS7 791 aa14.16□□□□□ -0.14
CAPN3-220ENST00000569827 GDPD5Q8WTR4 605 aa14.16□□□□□ -0.14
CAPN3-220ENST00000569827 DHX38Q92620 1227 aaKnown RBP14.16□□□□□ -0.14
CAPN3-220ENST00000569827 RILPL2Q969X0 211 aa14.16□□□□□ -0.14
CAPN3-220ENST00000569827 SLC9A7Q96T83 725 aa14.16□□□□□ -0.14
CAPN3-220ENST00000569827 LNPKQ9C0E8 428 aa14.16□□□□□ -0.14
CAPN3-220ENST00000569827 TSPYL2Q9H2G4 693 aaPredicted RBP14.16□□□□□ -0.14
CAPN3-220ENST00000569827 C5orf42Q9H799 3197 aa14.16□□□□□ -0.14
CAPN3-220ENST00000569827 WDR19Q8NEZ3 1342 aa14.15□□□□□ -0.14
CAPN3-220ENST00000569827 PITPNM1O00562 1244 aa14.15□□□□□ -0.14
CAPN3-220ENST00000569827 NKRFO15226 690 aaKnown RBP eCLIP14.15□□□□□ -0.14
CAPN3-220ENST00000569827 GTPBP6O43824 516 aaPredicted RBP14.15□□□□□ -0.14
CAPN3-220ENST00000569827 ZNF286BP0CG31 522 aa14.15□□□□□ -0.14
CAPN3-220ENST00000569827 RRP1P56182 461 aaKnown RBP14.15□□□□□ -0.14
CAPN3-220ENST00000569827 ARHGAP1Q07960 439 aa14.15□□□□□ -0.14
CAPN3-220ENST00000569827 GRB10Q13322 594 aa14.15□□□□□ -0.14
CAPN3-220ENST00000569827 GPNMBQ14956 572 aa14.15□□□□□ -0.14
CAPN3-220ENST00000569827 BRDTQ58F21 947 aaPredicted RBP14.15□□□□□ -0.14
CAPN3-220ENST00000569827 FAM117BQ6P1L5 589 aa14.15□□□□□ -0.14
CAPN3-220ENST00000569827 CCDC62Q6P9F0 684 aa14.15□□□□□ -0.14
CAPN3-220ENST00000569827 DNERQ8NFT8 737 aa14.15□□□□□ -0.14
CAPN3-220ENST00000569827 KAT2BQ92831 832 aa14.15□□□□□ -0.14
CAPN3-220ENST00000569827 ALG1Q9BT22 464 aa14.15□□□□□ -0.14
CAPN3-220ENST00000569827 TLL1O43897 1013 aa14.14□□□□□ -0.15
CAPN3-220ENST00000569827 DHX16O60231 1041 aaKnown RBP14.14□□□□□ -0.15
CAPN3-220ENST00000569827 LPXNO60711 386 aa14.14□□□□□ -0.15
CAPN3-220ENST00000569827 EIF2AK2P19525 551 aaKnown RBP14.14□□□□□ -0.15
CAPN3-220ENST00000569827 WDR5P61964 334 aaKnown RBP14.14□□□□□ -0.15
CAPN3-220ENST00000569827 BFSP2Q13515 415 aa14.14□□□□□ -0.15
CAPN3-220ENST00000569827 B4GALNT3Q6L9W6 998 aa14.14□□□□□ -0.15
CAPN3-220ENST00000569827 SYTL5Q8TDW5 730 aaPredicted RBP14.14□□□□□ -0.15
CAPN3-220ENST00000569827 WNT8BQ93098 351 aa14.14□□□□□ -0.15
CAPN3-220ENST00000569827 ZFP91Q96JP5 570 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms